RNA–Protein interactions for RNA: ENST00000343090.10

UBE4B-202, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best) BASIC

Gene UBE4B, Length 5,267 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-202ENST00000343090 A0A1W2PP18 115 aa7.86□□□□□ -1.15
UBE4B-202ENST00000343090 ZNF701M0R085 212 aaPredicted RBP7.86□□□□□ -1.15
UBE4B-202ENST00000343090 PLK4O00444 970 aa7.86□□□□□ -1.15
UBE4B-202ENST00000343090 DCLK1O15075 740 aa7.86□□□□□ -1.15
UBE4B-202ENST00000343090 SNAP29O95721 258 aa7.86□□□□□ -1.15
UBE4B-202ENST00000343090 EDN1P05305 212 aa7.86□□□□□ -1.15
UBE4B-202ENST00000343090 SLC35E2BP0CK96 405 aa7.86□□□□□ -1.15
UBE4B-202ENST00000343090 IDSP22304 550 aa7.86□□□□□ -1.15
UBE4B-202ENST00000343090 DGKGP49619 791 aa7.86□□□□□ -1.15
UBE4B-202ENST00000343090 TARDBPQ13148 414 aaKnown RBP eCLIP7.86□□□□□ -1.152e-6■■■■□ 21.2
UBE4B-202ENST00000343090 SLBPQ14493 270 aaKnown RBP eCLIP7.86□□□□□ -1.15
UBE4B-202ENST00000343090 USP30Q70CQ3 517 aa7.86□□□□□ -1.15
UBE4B-202ENST00000343090 ADGRG2Q8IZP9 1017 aa7.86□□□□□ -1.15
UBE4B-202ENST00000343090 NPWQ8N729 165 aa7.86□□□□□ -1.15
UBE4B-202ENST00000343090 ZNF433Q8N7K0 673 aaPredicted RBP7.86□□□□□ -1.15
UBE4B-202ENST00000343090 Q8N9G6 341 aaPredicted RBP7.86□□□□□ -1.15
UBE4B-202ENST00000343090 OR7G1Q8NGA0 311 aa7.86□□□□□ -1.15
UBE4B-202ENST00000343090 STON2Q8WXE9 905 aa7.86□□□□□ -1.15
UBE4B-202ENST00000343090 C8orf48Q96LL4 319 aa7.86□□□□□ -1.15
UBE4B-202ENST00000343090 IL4I1Q96RQ9 567 aa7.86□□□□□ -1.15
UBE4B-202ENST00000343090 TTLL2Q9BWV7 592 aa7.86□□□□□ -1.15
UBE4B-202ENST00000343090 TRIT1Q9H3H1 467 aaKnown RBP7.86□□□□□ -1.15
UBE4B-202ENST00000343090 SIAEQ9HAT2 523 aa7.86□□□□□ -1.15
UBE4B-202ENST00000343090 ZDHHC3Q9NYG2 299 aa7.86□□□□□ -1.15
UBE4B-202ENST00000343090 ACTR3BQ9P1U1 418 aa7.86□□□□□ -1.15
UBE4B-202ENST00000343090 ANKMY1Q9P2S6 941 aa7.86□□□□□ -1.15
UBE4B-202ENST00000343090 MEIS3P2A8K0S8 358 aa7.86□□□□□ -1.15
UBE4B-202ENST00000343090 SLC31A1O15431 190 aa7.86□□□□□ -1.15
UBE4B-202ENST00000343090 EDIL3O43854 480 aa7.86□□□□□ -1.15
UBE4B-202ENST00000343090 CYP11A1P05108 521 aa7.86□□□□□ -1.15
UBE4B-202ENST00000343090 HAPLN1P10915 354 aaPredicted RBP7.86□□□□□ -1.15
UBE4B-202ENST00000343090 SLC15A1P46059 708 aa7.86□□□□□ -1.15
UBE4B-202ENST00000343090 MS4A2Q01362 244 aa7.86□□□□□ -1.15
UBE4B-202ENST00000343090 SCARB2Q14108 478 aa7.86□□□□□ -1.15
UBE4B-202ENST00000343090 TMPRSS11AQ6ZMR5 421 aa7.86□□□□□ -1.15
UBE4B-202ENST00000343090 AGMOQ6ZNB7 445 aa7.86□□□□□ -1.15
UBE4B-202ENST00000343090 PIWIL3Q7Z3Z3 882 aaKnown RBP7.86□□□□□ -1.15
UBE4B-202ENST00000343090 CMTM8Q8IZV2 173 aa7.86□□□□□ -1.15
UBE4B-202ENST00000343090 OR10G2Q8NGC3 310 aa7.86□□□□□ -1.15
UBE4B-202ENST00000343090 JPH3Q8WXH2 748 aaPredicted RBP7.86□□□□□ -1.15
UBE4B-202ENST00000343090 PPP1R14AQ96A00 147 aa7.86□□□□□ -1.15
UBE4B-202ENST00000343090 ADAMTS10Q9H324 1103 aa7.86□□□□□ -1.15
UBE4B-202ENST00000343090 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.86□□□□□ -1.15
UBE4B-202ENST00000343090 COQ3Q9NZJ6 369 aa7.86□□□□□ -1.15
UBE4B-202ENST00000343090 ZIM2Q9NZV7 527 aa7.86□□□□□ -1.15
UBE4B-202ENST00000343090 MARCH4Q9P2E8 410 aaPredicted RBP7.86□□□□□ -1.15
UBE4B-202ENST00000343090 VPS29Q9UBQ0 182 aa7.86□□□□□ -1.15
UBE4B-202ENST00000343090 IFT52Q9Y366 437 aa7.86□□□□□ -1.15
UBE4B-202ENST00000343090 TMEM88BA6NKF7 163 aa7.86□□□□□ -1.15
UBE4B-202ENST00000343090 MANBAO00462 879 aa7.86□□□□□ -1.15
UBE4B-202ENST00000343090 RASGRP1O95267 797 aa7.86□□□□□ -1.15
UBE4B-202ENST00000343090 RPLP0P05388 317 aaKnown RBP7.86□□□□□ -1.15
UBE4B-202ENST00000343090 HOXB6P17509 224 aaKnown RBP7.86□□□□□ -1.15
UBE4B-202ENST00000343090 PRKACAP17612 351 aa7.86□□□□□ -1.15
UBE4B-202ENST00000343090 CD247P20963 164 aa7.86□□□□□ -1.15
UBE4B-202ENST00000343090 ITPKBP27987 946 aa7.86□□□□□ -1.15
UBE4B-202ENST00000343090 SLC11A1P49279 550 aa7.86□□□□□ -1.15
UBE4B-202ENST00000343090 SERINC3Q13530 473 aa7.86□□□□□ -1.15
UBE4B-202ENST00000343090 ZNF404Q494X3 552 aa7.86□□□□□ -1.15
UBE4B-202ENST00000343090 IFNL1Q8IU54 200 aa7.86□□□□□ -1.15
UBE4B-202ENST00000343090 ANKLE1Q8NAG6 615 aa7.86□□□□□ -1.15
UBE4B-202ENST00000343090 KIAA1191Q96A73 305 aa7.86□□□□□ -1.15
UBE4B-202ENST00000343090 DERL2Q9GZP9 239 aa7.86□□□□□ -1.15
UBE4B-202ENST00000343090 SLC32A1Q9H598 525 aa7.86□□□□□ -1.15
UBE4B-202ENST00000343090 TMEM248Q9NWD8 314 aa7.86□□□□□ -1.15
UBE4B-202ENST00000343090 PCDH10Q9P2E7 1040 aa7.86□□□□□ -1.15
UBE4B-202ENST00000343090 PPIEQ9UNP9 301 aaKnown RBP7.86□□□□□ -1.15
UBE4B-202ENST00000343090 A0A1W2PRB8 838 aa7.85□□□□□ -1.15
UBE4B-202ENST00000343090 PRAMEF11O60813 436 aa7.85□□□□□ -1.15
UBE4B-202ENST00000343090 SNNO75324 88 aaPredicted RBP7.85□□□□□ -1.15
UBE4B-202ENST00000343090 LAMP2P13473 410 aa7.85□□□□□ -1.15
UBE4B-202ENST00000343090 TIE1P35590 1138 aa7.85□□□□□ -1.15
UBE4B-202ENST00000343090 TIGD6Q17RP2 521 aa7.85□□□□□ -1.15
UBE4B-202ENST00000343090 PIGGQ5H8A4 983 aa7.85□□□□□ -1.15
UBE4B-202ENST00000343090 FRG2Q64ET8 278 aa7.85□□□□□ -1.15
UBE4B-202ENST00000343090 CCBE1Q6UXH8 406 aaPredicted RBP7.85□□□□□ -1.15
UBE4B-202ENST00000343090 GALNT13Q8IUC8 556 aa7.85□□□□□ -1.15
UBE4B-202ENST00000343090 GHDCQ8N2G8 530 aa7.85□□□□□ -1.15
UBE4B-202ENST00000343090 C2orf15Q8WU43 125 aaKnown RBP7.85□□□□□ -1.15
UBE4B-202ENST00000343090 IGSF8Q969P0 613 aa7.85□□□□□ -1.15
UBE4B-202ENST00000343090 FRG2BQ96QU4 278 aa7.85□□□□□ -1.15
UBE4B-202ENST00000343090 PHOX2BQ99453 314 aa7.85□□□□□ -1.15
UBE4B-202ENST00000343090 SLC29A1Q99808 456 aa7.85□□□□□ -1.15
UBE4B-202ENST00000343090 SLC35A5Q9BS91 424 aa7.85□□□□□ -1.15
UBE4B-202ENST00000343090 SYT11Q9BT88 431 aa7.85□□□□□ -1.15
UBE4B-202ENST00000343090 ANKRD60Q9BZ19 345 aa7.85□□□□□ -1.15
UBE4B-202ENST00000343090 VRTNQ9H8Y1 702 aa7.85□□□□□ -1.15
UBE4B-202ENST00000343090 GOLGA4Q13439 2230 aaKnown RBP7.85□□□□□ -1.15
UBE4B-202ENST00000343090 PDPK1O15530 556 aa7.85□□□□□ -1.15
UBE4B-202ENST00000343090 PGRP06401 933 aa7.85□□□□□ -1.15
UBE4B-202ENST00000343090 DHRS4L1P0CG22 281 aa7.85□□□□□ -1.15
UBE4B-202ENST00000343090 MYF6P23409 242 aa7.85□□□□□ -1.15
UBE4B-202ENST00000343090 HLCSP50747 726 aa7.85□□□□□ -1.15
UBE4B-202ENST00000343090 CDKN2DP55273 166 aa7.85□□□□□ -1.15
UBE4B-202ENST00000343090 TXNL4AP83876 142 aaKnown RBP7.85□□□□□ -1.15
UBE4B-202ENST00000343090 DSC3Q14574 896 aa7.85□□□□□ -1.15
UBE4B-202ENST00000343090 SF3B4Q15427 424 aaKnown RBP eCLIP7.85□□□□□ -1.152e-6■■■■□ 26
UBE4B-202ENST00000343090 RFTN2Q52LD8 501 aaPredicted RBP7.85□□□□□ -1.15
UBE4B-202ENST00000343090 LRRC66Q68CR7 880 aa7.85□□□□□ -1.15
UBE4B-202ENST00000343090 TOR1AIP2Q8NFQ8 470 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms