RNA–Protein interactions for RNA: ENST00000341372.7

TPM3-207, Transcript of tropomyosin 3, humanhuman

TSL 5 BASIC

Gene TPM3, Length 2,007 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-207ENST00000341372 PFKFB4Q16877 469 aa9.96□□□□□ -0.81
TPM3-207ENST00000341372 DNAJC21Q5F1R6 531 aaKnown RBP9.96□□□□□ -0.81
TPM3-207ENST00000341372 WDR93Q6P2C0 686 aa9.96□□□□□ -0.81
TPM3-207ENST00000341372 RAB11FIP2Q7L804 512 aa9.96□□□□□ -0.81
TPM3-207ENST00000341372 CLEC14AQ86T13 490 aa9.96□□□□□ -0.81
TPM3-207ENST00000341372 CILP2Q8IUL8 1156 aa9.96□□□□□ -0.81
TPM3-207ENST00000341372 LKAAEAR1Q8TD35 194 aa9.96□□□□□ -0.81
TPM3-207ENST00000341372 LRRC39Q96DD0 335 aa9.96□□□□□ -0.81
TPM3-207ENST00000341372 ZNF578Q96N58 590 aaPredicted RBP9.96□□□□□ -0.81
TPM3-207ENST00000341372 EBNA1BP2Q99848 306 aaKnown RBP9.96□□□□□ -0.81
TPM3-207ENST00000341372 WDR83Q9BRX9 315 aaKnown RBP9.96□□□□□ -0.81
TPM3-207ENST00000341372 NAT9Q9BTE0 207 aa9.96□□□□□ -0.81
TPM3-207ENST00000341372 IMP3Q9NV31 184 aaKnown RBP9.96□□□□□ -0.81
TPM3-207ENST00000341372 FAM53CQ9NYF3 392 aa9.96□□□□□ -0.81
TPM3-207ENST00000341372 FAM169AQ9Y6X4 670 aa9.96□□□□□ -0.81
TPM3-207ENST00000341372 CACNA1BQ00975 2339 aa9.96□□□□□ -0.82
TPM3-207ENST00000341372 RAD51CO43502 376 aa9.95□□□□□ -0.82
TPM3-207ENST00000341372 GPC4O75487 556 aa9.95□□□□□ -0.82
TPM3-207ENST00000341372 TTC4O95801 387 aa9.95□□□□□ -0.82
TPM3-207ENST00000341372 ITGA2BP08514 1039 aa9.95□□□□□ -0.82
TPM3-207ENST00000341372 ANKRD34CP0C6C1 535 aa9.95□□□□□ -0.82
TPM3-207ENST00000341372 ACADLP28330 430 aa9.95□□□□□ -0.82
TPM3-207ENST00000341372 PDHA2P29803 388 aa9.95□□□□□ -0.82
TPM3-207ENST00000341372 RPL21P46778 160 aaKnown RBP9.95□□□□□ -0.82
TPM3-207ENST00000341372 CLK1P49759 484 aaKnown RBP9.95□□□□□ -0.82
TPM3-207ENST00000341372 CRYMQ14894 314 aa9.95□□□□□ -0.82
TPM3-207ENST00000341372 ST3GAL2Q16842 350 aa9.95□□□□□ -0.82
TPM3-207ENST00000341372 CTSL3PQ5NE16 218 aa9.95□□□□□ -0.82
TPM3-207ENST00000341372 BEND6Q5SZJ8 279 aaPredicted RBP9.95□□□□□ -0.82
TPM3-207ENST00000341372 ZNF468Q5VIY5 522 aaPredicted RBP9.95□□□□□ -0.82
TPM3-207ENST00000341372 NEPROQ6NW34 567 aa9.95□□□□□ -0.82
TPM3-207ENST00000341372 DUS1LQ6P1R4 473 aaKnown RBP9.95□□□□□ -0.82
TPM3-207ENST00000341372 NEK10Q6ZWH5 1172 aa9.95□□□□□ -0.82
TPM3-207ENST00000341372 CENPUQ71F23 418 aa9.95□□□□□ -0.82
TPM3-207ENST00000341372 ARHGAP22Q7Z5H3 698 aa9.95□□□□□ -0.82
TPM3-207ENST00000341372 ELMO1Q92556 727 aa9.95□□□□□ -0.82
TPM3-207ENST00000341372 RSC1A1Q92681 617 aa9.95□□□□□ -0.82
TPM3-207ENST00000341372 SLC46A1Q96NT5 459 aa9.95□□□□□ -0.82
TPM3-207ENST00000341372 BIRC8Q96P09 236 aa9.95□□□□□ -0.82
TPM3-207ENST00000341372 FANCD2OSQ96PS1 177 aa9.95□□□□□ -0.82
TPM3-207ENST00000341372 CMKLR1Q99788 373 aa9.95□□□□□ -0.82
TPM3-207ENST00000341372 TSSK1BQ9BXA7 367 aa9.95□□□□□ -0.82
TPM3-207ENST00000341372 B3GNT4Q9C0J1 378 aa9.95□□□□□ -0.82
TPM3-207ENST00000341372 PLAC1Q9HBJ0 212 aa9.95□□□□□ -0.82
TPM3-207ENST00000341372 INTS10Q9NVR2 710 aaKnown RBP9.95□□□□□ -0.82
TPM3-207ENST00000341372 GPATCH2Q9NW75 528 aa9.95□□□□□ -0.82
TPM3-207ENST00000341372 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.95□□□□□ -0.82
TPM3-207ENST00000341372 LRFN1Q9P244 771 aa9.95□□□□□ -0.82
TPM3-207ENST00000341372 GIMAP2Q9UG22 337 aa9.95□□□□□ -0.82
TPM3-207ENST00000341372 GNPTGQ9UJJ9 305 aa9.95□□□□□ -0.82
TPM3-207ENST00000341372 ACAD8Q9UKU7 415 aa9.95□□□□□ -0.82
TPM3-207ENST00000341372 RNF112Q9ULX5 631 aa9.95□□□□□ -0.82
TPM3-207ENST00000341372 CDYLQ9Y232 598 aa9.95□□□□□ -0.82
TPM3-207ENST00000341372 LOXL2Q9Y4K0 774 aa9.95□□□□□ -0.82
TPM3-207ENST00000341372 URB1O60287 2271 aaKnown RBP9.95□□□□□ -0.82
TPM3-207ENST00000341372 GOLGA8KD6RF30 607 aa9.95□□□□□ -0.82
TPM3-207ENST00000341372 E7ESA3 106 aa9.95□□□□□ -0.82
TPM3-207ENST00000341372 GOLGA8TH3BQL2 631 aa9.95□□□□□ -0.82
TPM3-207ENST00000341372 PFDN6O15212 129 aa9.95□□□□□ -0.82
TPM3-207ENST00000341372 TOX3O15405 576 aaPredicted RBP9.95□□□□□ -0.82
TPM3-207ENST00000341372 TLX3O43711 291 aaPredicted RBP9.95□□□□□ -0.82
TPM3-207ENST00000341372 EIF4EBP3O60516 100 aaPredicted RBP9.95□□□□□ -0.82
TPM3-207ENST00000341372 NDUFS3O75489 264 aa9.95□□□□□ -0.82
TPM3-207ENST00000341372 AOAHP28039 575 aa9.95□□□□□ -0.82
TPM3-207ENST00000341372 CCR7P32248 378 aa9.95□□□□□ -0.82
TPM3-207ENST00000341372 GRK3P35626 688 aa9.95□□□□□ -0.82
TPM3-207ENST00000341372 PREPP48147 710 aa9.95□□□□□ -0.82
TPM3-207ENST00000341372 ALDH9A1P49189 494 aa9.95□□□□□ -0.82
TPM3-207ENST00000341372 DCAF7P61962 342 aa9.95□□□□□ -0.82
TPM3-207ENST00000341372 BOP1Q14137 746 aaKnown RBP9.95□□□□□ -0.82
TPM3-207ENST00000341372 TRADDQ15628 312 aa9.95□□□□□ -0.82
TPM3-207ENST00000341372 PHF19Q5T6S3 580 aa9.95□□□□□ -0.82
TPM3-207ENST00000341372 STEAP4Q687X5 459 aa9.95□□□□□ -0.82
TPM3-207ENST00000341372 ZNF449Q6P9G9 518 aa9.95□□□□□ -0.82
TPM3-207ENST00000341372 SDCCAG8Q86SQ7 713 aaPredicted RBP9.95□□□□□ -0.82
TPM3-207ENST00000341372 PLXDC1Q8IUK5 500 aa9.95□□□□□ -0.82
TPM3-207ENST00000341372 SLC22A15Q8IZD6 547 aa9.95□□□□□ -0.82
TPM3-207ENST00000341372 PDIK1LQ8N165 341 aa9.95□□□□□ -0.82
TPM3-207ENST00000341372 BBOF1Q8ND07 529 aa9.95□□□□□ -0.82
TPM3-207ENST00000341372 PANX3Q96QZ0 392 aa9.95□□□□□ -0.82
TPM3-207ENST00000341372 ERP44Q9BS26 406 aa9.95□□□□□ -0.82
TPM3-207ENST00000341372 TWSG1Q9GZX9 223 aa9.95□□□□□ -0.82
TPM3-207ENST00000341372 MVB12BQ9H7P6 319 aa9.95□□□□□ -0.82
TPM3-207ENST00000341372 ZMAT3Q9HA38 289 aaKnown RBP9.95□□□□□ -0.82
TPM3-207ENST00000341372 SEMA5BQ9P283 1151 aa9.95□□□□□ -0.82
TPM3-207ENST00000341372 SLC24A2Q9UI40 661 aa9.95□□□□□ -0.82
TPM3-207ENST00000341372 ACSL6Q9UKU0 697 aa9.95□□□□□ -0.82
TPM3-207ENST00000341372 CFAP20Q9Y6A4 193 aaKnown RBP9.95□□□□□ -0.82
TPM3-207ENST00000341372 MAD1L1Q9Y6D9 718 aa9.95□□□□□ -0.82
TPM3-207ENST00000341372 TEX264Q9Y6I9 313 aa9.95□□□□□ -0.82
TPM3-207ENST00000341372 COLEC10Q9Y6Z7 277 aa9.95□□□□□ -0.82
TPM3-207ENST00000341372 ZZEF1O43149 2961 aa9.95□□□□□ -0.82
TPM3-207ENST00000341372 CCDC151A5D8V7 595 aa9.94□□□□□ -0.82
TPM3-207ENST00000341372 H3BMM5 538 aa9.94□□□□□ -0.82
TPM3-207ENST00000341372 BANF1O75531 89 aa9.94□□□□□ -0.82
TPM3-207ENST00000341372 ESR1P03372 595 aa9.94□□□□□ -0.82
TPM3-207ENST00000341372 CD3EP07766 207 aa9.94□□□□□ -0.82
TPM3-207ENST00000341372 KRT15P19012 456 aa9.94□□□□□ -0.82
TPM3-207ENST00000341372 GFERP55789 205 aa9.94□□□□□ -0.82
TPM3-207ENST00000341372 FRG1Q14331 258 aaKnown RBP9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms