RNA–Protein interactions for RNA: ENST00000340541.4

VAPA-201, Transcript of VAMP associated protein A, humanhuman

TSL 5 BASIC

Gene VAPA, Length 1,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-201ENST00000340541 ZNF655Q8N720 491 aaPredicted RBP14.75□□□□□ -0.05
VAPA-201ENST00000340541 MCOLN3Q8TDD5 553 aa14.75□□□□□ -0.05
VAPA-201ENST00000340541 ANKRD49Q8WVL7 239 aa14.75□□□□□ -0.05
VAPA-201ENST00000340541 CDKL2Q92772 493 aa14.75□□□□□ -0.05
VAPA-201ENST00000340541 N4BP2L2Q92802 583 aaPredicted RBP14.75□□□□□ -0.05
VAPA-201ENST00000340541 CCDC138Q96M89 665 aa14.75□□□□□ -0.05
VAPA-201ENST00000340541 RBBP8Q99708 897 aa14.75□□□□□ -0.05
VAPA-201ENST00000340541 CPNE1Q99829 537 aa14.75□□□□□ -0.05
VAPA-201ENST00000340541 DPH7Q9BTV6 452 aa14.75□□□□□ -0.05
VAPA-201ENST00000340541 EPN3Q9H201 632 aa14.75□□□□□ -0.05
VAPA-201ENST00000340541 KCNMB2Q9Y691 235 aa14.75□□□□□ -0.05
VAPA-201ENST00000340541 MDC1Q14676 2089 aaKnown RBP14.75□□□□□ -0.05
VAPA-201ENST00000340541 FLNCQ14315 2725 aa14.74□□□□□ -0.05
VAPA-201ENST00000340541 KATNA1O75449 491 aa14.74□□□□□ -0.05
VAPA-201ENST00000340541 KLK3P07288 261 aaPredicted RBP14.74□□□□□ -0.05
VAPA-201ENST00000340541 HBQ1P09105 142 aa14.74□□□□□ -0.05
VAPA-201ENST00000340541 FURINP09958 794 aa14.74□□□□□ -0.05
VAPA-201ENST00000340541 GP5P40197 560 aa14.74□□□□□ -0.05
VAPA-201ENST00000340541 TBPL1P62380 186 aa14.74□□□□□ -0.05
VAPA-201ENST00000340541 SRSF1Q07955 248 aaKnown RBP eCLIP14.74□□□□□ -0.05
VAPA-201ENST00000340541 UBAP2LQ14157 1087 aaKnown RBP14.74□□□□□ -0.05
VAPA-201ENST00000340541 EFTUD2Q15029 972 aaKnown RBP eCLIP14.74□□□□□ -0.053e-9■■■■□ 26.5
VAPA-201ENST00000340541 PPP1R3AQ16821 1122 aa14.74□□□□□ -0.05
VAPA-201ENST00000340541 GLE1Q53GS7 698 aaKnown RBP14.74□□□□□ -0.05
VAPA-201ENST00000340541 LACTB2Q53H82 288 aaPredicted RBP14.74□□□□□ -0.05
VAPA-201ENST00000340541 FRMPD2BQ6IN97 320 aa14.74□□□□□ -0.05
VAPA-201ENST00000340541 TCTN3Q6NUS6 607 aa14.74□□□□□ -0.05
VAPA-201ENST00000340541 C16orf46Q6P387 395 aa14.74□□□□□ -0.05
VAPA-201ENST00000340541 FBXO42Q6P3S6 717 aa14.74□□□□□ -0.05
VAPA-201ENST00000340541 TLDC1Q6P9B6 456 aa14.74□□□□□ -0.05
VAPA-201ENST00000340541 SBSNQ6UWP8 590 aa14.74□□□□□ -0.05
VAPA-201ENST00000340541 PAQR7Q86WK9 346 aa14.74□□□□□ -0.05
VAPA-201ENST00000340541 RELL1Q8IUW5 271 aa14.74□□□□□ -0.05
VAPA-201ENST00000340541 FBF1Q8TES7 1133 aa14.74□□□□□ -0.05
VAPA-201ENST00000340541 GBP5Q96PP8 586 aa14.74□□□□□ -0.05
VAPA-201ENST00000340541 GPR22Q99680 433 aa14.74□□□□□ -0.05
VAPA-201ENST00000340541 PLCD4Q9BRC7 762 aa14.74□□□□□ -0.05
VAPA-201ENST00000340541 GPR87Q9BY21 358 aa14.74□□□□□ -0.05
VAPA-201ENST00000340541 FAM129AQ9BZQ8 928 aa14.74□□□□□ -0.05
VAPA-201ENST00000340541 ACTL8Q9H568 366 aa14.74□□□□□ -0.05
VAPA-201ENST00000340541 CAB39LQ9H9S4 337 aa14.74□□□□□ -0.05
VAPA-201ENST00000340541 POPDC3Q9HBV1 291 aa14.74□□□□□ -0.05
VAPA-201ENST00000340541 MRPS30Q9NP92 439 aaKnown RBP14.74□□□□□ -0.05
VAPA-201ENST00000340541 ANKMY1Q9P2S6 941 aa14.74□□□□□ -0.05
VAPA-201ENST00000340541 POLHQ9Y253 713 aa14.74□□□□□ -0.05
VAPA-201ENST00000340541 NAV2Q8IVL1 2488 aa14.74□□□□□ -0.05
VAPA-201ENST00000340541 LOC105369274A0A096LPK9 316 aa14.73□□□□□ -0.05
VAPA-201ENST00000340541 LOC102723532A0A0G2JNH3 316 aa14.73□□□□□ -0.05
VAPA-201ENST00000340541 A0A0J9YVX5 310 aa14.73□□□□□ -0.05
VAPA-201ENST00000340541 FITM1A5D6W6 292 aa14.73□□□□□ -0.05
VAPA-201ENST00000340541 MKRN2OSH3BPM6 223 aa14.73□□□□□ -0.05
VAPA-201ENST00000340541 CDC7O00311 574 aa14.73□□□□□ -0.05
VAPA-201ENST00000340541 CREG1O75629 220 aa14.73□□□□□ -0.05
VAPA-201ENST00000340541 FAM155BO75949 473 aa14.73□□□□□ -0.05
VAPA-201ENST00000340541 RAB40ALP0C0E4 278 aa14.73□□□□□ -0.05
VAPA-201ENST00000340541 ITGAXP20702 1163 aa14.73□□□□□ -0.05
VAPA-201ENST00000340541 PTPN4P29074 926 aa14.73□□□□□ -0.05
VAPA-201ENST00000340541 STX2P32856 288 aa14.73□□□□□ -0.05
VAPA-201ENST00000340541 RPS18P62269 152 aaKnown RBP14.73□□□□□ -0.05
VAPA-201ENST00000340541 ABATP80404 500 aa14.73□□□□□ -0.05
VAPA-201ENST00000340541 POU4F1Q01851 419 aa14.73□□□□□ -0.05
VAPA-201ENST00000340541 ILF2Q12905 390 aaKnown RBP14.73□□□□□ -0.05
VAPA-201ENST00000340541 KLRB1Q12918 225 aa14.73□□□□□ -0.05
VAPA-201ENST00000340541 TSTA3Q13630 321 aaPredicted RBP14.73□□□□□ -0.05
VAPA-201ENST00000340541 AGTRAPQ6RW13 159 aa14.73□□□□□ -0.05
VAPA-201ENST00000340541 CTAGE3PQ8IX95 158 aa14.73□□□□□ -0.05
VAPA-201ENST00000340541 OR4N4Q8N0Y3 316 aa14.73□□□□□ -0.05
VAPA-201ENST00000340541 CEP112Q8N8E3 955 aa14.73□□□□□ -0.05
VAPA-201ENST00000340541 ANKRD7Q92527 254 aa14.73□□□□□ -0.05
VAPA-201ENST00000340541 DPH2Q9BQC3 489 aaPredicted RBP14.73□□□□□ -0.05
VAPA-201ENST00000340541 SELENOSQ9BQE4 189 aa14.73□□□□□ -0.05
VAPA-201ENST00000340541 SGPP1Q9BX95 441 aa14.73□□□□□ -0.05
VAPA-201ENST00000340541 ATG10Q9H0Y0 220 aa14.73□□□□□ -0.05
VAPA-201ENST00000340541 ZNF71Q9NQZ8 489 aaPredicted RBP14.73□□□□□ -0.05
VAPA-201ENST00000340541 CUEDC1Q9NWM3 386 aaPredicted RBP14.73□□□□□ -0.05
VAPA-201ENST00000340541 NINJ2Q9NZG7 142 aa14.73□□□□□ -0.05
VAPA-201ENST00000340541 DHCR7Q9UBM7 475 aaKnown RBP14.73□□□□□ -0.05
VAPA-201ENST00000340541 SRPK3Q9UPE1 567 aa14.73□□□□□ -0.05
VAPA-201ENST00000340541 SH2B3Q9UQQ2 575 aa14.73□□□□□ -0.05
VAPA-201ENST00000340541 PTPN13Q12923 2485 aa14.73□□□□□ -0.05
VAPA-201ENST00000340541 CCDC88CQ9P219 2028 aa14.72□□□□□ -0.05
VAPA-201ENST00000340541 SRPX2O60687 465 aaPredicted RBP14.72□□□□□ -0.05
VAPA-201ENST00000340541 CCNDBP1O95273 360 aa14.72□□□□□ -0.05
VAPA-201ENST00000340541 MED26O95402 600 aa14.72□□□□□ -0.05
VAPA-201ENST00000340541 ENO2P09104 434 aaPredicted RBP14.72□□□□□ -0.05
VAPA-201ENST00000340541 AP1S2P56377 157 aa14.72□□□□□ -0.05
VAPA-201ENST00000340541 NAA25Q14CX7 972 aa14.72□□□□□ -0.05
VAPA-201ENST00000340541 ZKSCAN8Q15776 578 aaPredicted RBP14.72□□□□□ -0.05
VAPA-201ENST00000340541 TCTE1Q5JU00 501 aa14.72□□□□□ -0.05
VAPA-201ENST00000340541 C1orf189Q5VU69 101 aa14.72□□□□□ -0.05
VAPA-201ENST00000340541 FAM69BQ5VUD6 431 aa14.72□□□□□ -0.05
VAPA-201ENST00000340541 NKAPQ8N5F7 415 aaKnown RBP14.72□□□□□ -0.05
VAPA-201ENST00000340541 PPM1NQ8N819 430 aa14.72□□□□□ -0.05
VAPA-201ENST00000340541 ENDOVQ8N8Q3 282 aaKnown RBP14.72□□□□□ -0.05
VAPA-201ENST00000340541 PROKR1Q8TCW9 393 aa14.72□□□□□ -0.05
VAPA-201ENST00000340541 ZFYVE21Q9BQ24 234 aa14.72□□□□□ -0.05
VAPA-201ENST00000340541 NLNQ9BYT8 704 aa14.72□□□□□ -0.05
VAPA-201ENST00000340541 SLC7A5P2Q9GIP4 190 aa14.72□□□□□ -0.05
VAPA-201ENST00000340541 GPAMQ9HCL2 828 aa14.72□□□□□ -0.05
VAPA-201ENST00000340541 CCDC177Q9NQR7 707 aaPredicted RBP14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms