RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 EPHA2P29317 976 aa8.56□□□□□ -1.04
SNCA-201ENST00000336904 STT3AP46977 705 aa8.56□□□□□ -1.04
SNCA-201ENST00000336904 SOX9P48436 509 aa8.56□□□□□ -1.04
SNCA-201ENST00000336904 NR1H2P55055 460 aa8.56□□□□□ -1.04
SNCA-201ENST00000336904 ST8SIA6P61647 398 aa8.56□□□□□ -1.04
SNCA-201ENST00000336904 RUNDC3AQ59EK9 446 aa8.56□□□□□ -1.04
SNCA-201ENST00000336904 COQ5Q5HYK3 327 aa8.56□□□□□ -1.04
SNCA-201ENST00000336904 FAM83HQ6ZRV2 1179 aaPredicted RBP8.56□□□□□ -1.04
SNCA-201ENST00000336904 MICU2Q8IYU8 434 aa8.56□□□□□ -1.04
SNCA-201ENST00000336904 HUS1BQ8NHY5 278 aa8.56□□□□□ -1.04
SNCA-201ENST00000336904 UBE2FQ969M7 185 aa8.56□□□□□ -1.04
SNCA-201ENST00000336904 ZNF707Q96C28 371 aaPredicted RBP8.56□□□□□ -1.04
SNCA-201ENST00000336904 MACROD1Q9BQ69 325 aa8.56□□□□□ -1.04
SNCA-201ENST00000336904 BDH2Q9BUT1 245 aa8.56□□□□□ -1.04
SNCA-201ENST00000336904 LGR4Q9BXB1 951 aa8.56□□□□□ -1.04
SNCA-201ENST00000336904 CCDC90BQ9GZT6 254 aa8.56□□□□□ -1.04
SNCA-201ENST00000336904 PRKAG2Q9UGJ0 569 aa8.56□□□□□ -1.04
SNCA-201ENST00000336904 PLXND1Q9Y4D7 1925 aa8.56□□□□□ -1.04
SNCA-201ENST00000336904 LRRK1Q38SD2 2015 aa8.56□□□□□ -1.04
SNCA-201ENST00000336904 GFYI3L273 518 aa8.56□□□□□ -1.04
SNCA-201ENST00000336904 ARNTLO00327 626 aa8.56□□□□□ -1.04
SNCA-201ENST00000336904 FKBP9O95302 570 aa8.56□□□□□ -1.04
SNCA-201ENST00000336904 PCCBP05166 539 aa8.56□□□□□ -1.04
SNCA-201ENST00000336904 C8GP07360 202 aa8.56□□□□□ -1.04
SNCA-201ENST00000336904 RAP2AP10114 183 aa8.56□□□□□ -1.04
SNCA-201ENST00000336904 CYP2A6P11509 494 aaPredicted RBP8.56□□□□□ -1.04
SNCA-201ENST00000336904 MMP12P39900 470 aa8.56□□□□□ -1.04
SNCA-201ENST00000336904 CAPGP40121 348 aa8.56□□□□□ -1.04
SNCA-201ENST00000336904 PBX2P40425 430 aa8.56□□□□□ -1.04
SNCA-201ENST00000336904 KIR3DL1P43629 444 aa8.56□□□□□ -1.04
SNCA-201ENST00000336904 GPR1P46091 355 aa8.56□□□□□ -1.04
SNCA-201ENST00000336904 NRIP1P48552 1158 aa8.56□□□□□ -1.04
SNCA-201ENST00000336904 TBPL1P62380 186 aa8.56□□□□□ -1.04
SNCA-201ENST00000336904 FPGSQ05932 587 aa8.56□□□□□ -1.04
SNCA-201ENST00000336904 ACSM2AQ08AH3 577 aa8.56□□□□□ -1.04
SNCA-201ENST00000336904 UAP1L1Q3KQV9 507 aa8.56□□□□□ -1.04
SNCA-201ENST00000336904 FAM78AQ5JUQ0 283 aa8.56□□□□□ -1.04
SNCA-201ENST00000336904 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.56□□□□□ -1.04
SNCA-201ENST00000336904 INTS11Q5TA45 600 aaKnown RBP8.56□□□□□ -1.04
SNCA-201ENST00000336904 ACSM2BQ68CK6 577 aa8.56□□□□□ -1.04
SNCA-201ENST00000336904 BRAT1Q6PJG6 821 aa8.56□□□□□ -1.04
SNCA-201ENST00000336904 Q6ZPB1 254 aaPredicted RBP8.56□□□□□ -1.04
SNCA-201ENST00000336904 FKBP9P1Q75LS8 142 aa8.56□□□□□ -1.04
SNCA-201ENST00000336904 CEP68Q76N32 757 aa8.56□□□□□ -1.04
SNCA-201ENST00000336904 SPRED1Q7Z699 444 aa8.56□□□□□ -1.04
SNCA-201ENST00000336904 ZDHHC13Q8IUH4 622 aa8.56□□□□□ -1.04
SNCA-201ENST00000336904 CNIH3Q8TBE1 160 aa8.56□□□□□ -1.04
SNCA-201ENST00000336904 ZNF480Q8WV37 535 aa8.56□□□□□ -1.04
SNCA-201ENST00000336904 JPH3Q8WXH2 748 aaPredicted RBP8.56□□□□□ -1.04
SNCA-201ENST00000336904 CLP1Q92989 425 aaKnown RBP8.56□□□□□ -1.04
SNCA-201ENST00000336904 OTUB1Q96FW1 271 aaPredicted RBP8.56□□□□□ -1.04
SNCA-201ENST00000336904 CPPED1Q9BRF8 314 aaPredicted RBP8.56□□□□□ -1.04
SNCA-201ENST00000336904 DGCR6LQ9BY27 220 aa8.56□□□□□ -1.04
SNCA-201ENST00000336904 AMBRA1Q9C0C7 1298 aa8.56□□□□□ -1.04
SNCA-201ENST00000336904 RDH14Q9HBH5 336 aa8.56□□□□□ -1.04
SNCA-201ENST00000336904 TRIM39Q9HCM9 518 aa8.56□□□□□ -1.04
SNCA-201ENST00000336904 THG1LQ9NWX6 298 aaKnown RBP8.56□□□□□ -1.04
SNCA-201ENST00000336904 CNOT11Q9UKZ1 510 aaKnown RBP8.56□□□□□ -1.04
SNCA-201ENST00000336904 TMCO1Q9UM00 188 aa8.56□□□□□ -1.04
SNCA-201ENST00000336904 PRAMEF33A0A0G2JMD5 474 aa8.56□□□□□ -1.04
SNCA-201ENST00000336904 TBC1D3BA6NDS4 549 aa8.56□□□□□ -1.04
SNCA-201ENST00000336904 WNT9AO14904 365 aa8.56□□□□□ -1.04
SNCA-201ENST00000336904 KIAA0355O15063 1070 aa8.56□□□□□ -1.04
SNCA-201ENST00000336904 XPNPEP2O43895 674 aa8.56□□□□□ -1.04
SNCA-201ENST00000336904 ATG13O75143 517 aa8.56□□□□□ -1.04
SNCA-201ENST00000336904 SOD1P00441 154 aa8.56□□□□□ -1.04
SNCA-201ENST00000336904 IL6P05231 212 aa8.56□□□□□ -1.04
SNCA-201ENST00000336904 ANXA4P09525 319 aaPredicted RBP8.56□□□□□ -1.04
SNCA-201ENST00000336904 ATXN8OSP0DMR3 200 aa8.56□□□□□ -1.04
SNCA-201ENST00000336904 C6P13671 934 aa8.56□□□□□ -1.04
SNCA-201ENST00000336904 PTPN6P29350 595 aa8.56□□□□□ -1.04
SNCA-201ENST00000336904 OR1E2P47887 323 aa8.56□□□□□ -1.04
SNCA-201ENST00000336904 SEC13P55735 322 aa8.56□□□□□ -1.04
SNCA-201ENST00000336904 HTRA4P83105 476 aaPredicted RBP8.56□□□□□ -1.04
SNCA-201ENST00000336904 CNTN1Q12860 1018 aa8.56□□□□□ -1.04
SNCA-201ENST00000336904 GAB1Q13480 694 aa8.56□□□□□ -1.04
SNCA-201ENST00000336904 PRSS36Q5K4E3 855 aa8.56□□□□□ -1.04
SNCA-201ENST00000336904 KCTD8Q6ZWB6 473 aa8.56□□□□□ -1.04
SNCA-201ENST00000336904 LRRC70Q7Z2Q7 622 aa8.56□□□□□ -1.04
SNCA-201ENST00000336904 PROSER1Q86XN7 944 aa8.56□□□□□ -1.04
SNCA-201ENST00000336904 OR5AR1Q8NGP9 310 aa8.56□□□□□ -1.04
SNCA-201ENST00000336904 WDR48Q8TAF3 677 aa8.56□□□□□ -1.04
SNCA-201ENST00000336904 UBTD2Q8WUN7 234 aa8.56□□□□□ -1.04
SNCA-201ENST00000336904 OSCP1Q8WVF1 389 aa8.56□□□□□ -1.04
SNCA-201ENST00000336904 RAD9AQ99638 391 aa8.56□□□□□ -1.04
SNCA-201ENST00000336904 ATXN10Q9UBB4 475 aa8.56□□□□□ -1.04
SNCA-201ENST00000336904 OR1A2Q9Y585 309 aa8.56□□□□□ -1.04
SNCA-201ENST00000336904 PCDHGA8Q9Y5G5 932 aa8.56□□□□□ -1.04
SNCA-201ENST00000336904 TRPM6Q9BX84 2022 aa8.55□□□□□ -1.04
SNCA-201ENST00000336904 VPS13AQ96RL7 3174 aa8.55□□□□□ -1.04
SNCA-201ENST00000336904 ZNF106Q9H2Y7 1883 aaKnown RBP8.55□□□□□ -1.04
SNCA-201ENST00000336904 WASHC1A8K0Z3 465 aa8.55□□□□□ -1.04
SNCA-201ENST00000336904 CLIC1O00299 241 aa8.55□□□□□ -1.04
SNCA-201ENST00000336904 DEAF1O75398 565 aaPredicted RBP8.55□□□□□ -1.04
SNCA-201ENST00000336904 EPHX1P07099 455 aa8.55□□□□□ -1.04
SNCA-201ENST00000336904 MYF6P23409 242 aa8.55□□□□□ -1.04
SNCA-201ENST00000336904 CLDN8P56748 225 aa8.55□□□□□ -1.04
SNCA-201ENST00000336904 RPS26P62854 115 aaKnown RBP8.55□□□□□ -1.04
SNCA-201ENST00000336904 GRIK2Q13002 908 aa8.55□□□□□ -1.04
SNCA-201ENST00000336904 KCNAB2Q13303 367 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms