RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 TCEAL5Q5H9L2 206 aa14.59□□□□□ -0.07
C9orf47-201ENST00000334490 SHKBP1Q8TBC3 707 aa14.59□□□□□ -0.07
C9orf47-201ENST00000334490 FAM81AQ8TBF8 368 aa14.59□□□□□ -0.07
C9orf47-201ENST00000334490 NELL2Q99435 816 aa14.59□□□□□ -0.07
C9orf47-201ENST00000334490 RBM4BQ9BQ04 359 aaKnown RBP14.59□□□□□ -0.07
C9orf47-201ENST00000334490 RBM4Q9BWF3 364 aaKnown RBP14.59□□□□□ -0.07
C9orf47-201ENST00000334490 LRRC3Q9BY71 257 aa14.59□□□□□ -0.07
C9orf47-201ENST00000334490 RNF38Q9H0F5 515 aa14.59□□□□□ -0.07
C9orf47-201ENST00000334490 FBRSQ9HAH7 460 aa14.59□□□□□ -0.07
C9orf47-201ENST00000334490 GPR34Q9UPC5 381 aa14.59□□□□□ -0.07
C9orf47-201ENST00000334490 TMED5Q9Y3A6 229 aa14.59□□□□□ -0.07
C9orf47-201ENST00000334490 OR1A2Q9Y585 309 aa14.59□□□□□ -0.07
C9orf47-201ENST00000334490 FAM221BA6H8Z2 402 aa14.59□□□□□ -0.07
C9orf47-201ENST00000334490 SLC22A2O15244 555 aa14.59□□□□□ -0.07
C9orf47-201ENST00000334490 LSM3P62310 102 aaKnown RBP14.59□□□□□ -0.07
C9orf47-201ENST00000334490 PCDH1Q08174 1060 aa14.59□□□□□ -0.07
C9orf47-201ENST00000334490 FAM214AQ32MH5 1076 aa14.59□□□□□ -0.07
C9orf47-201ENST00000334490 ZNF57Q68EA5 555 aaPredicted RBP14.59□□□□□ -0.07
C9orf47-201ENST00000334490 TICAM1Q8IUC6 712 aa14.59□□□□□ -0.07
C9orf47-201ENST00000334490 C10orf82Q8WW14 230 aa14.59□□□□□ -0.07
C9orf47-201ENST00000334490 ZDHHC12Q96GR4 267 aa14.59□□□□□ -0.07
C9orf47-201ENST00000334490 RANBP9Q96S59 729 aa14.59□□□□□ -0.07
C9orf47-201ENST00000334490 C17orf62Q9BQA9 187 aa14.59□□□□□ -0.07
C9orf47-201ENST00000334490 CXorf56Q9H5V9 222 aa14.59□□□□□ -0.07
C9orf47-201ENST00000334490 TAS2R1Q9NYW7 299 aa14.59□□□□□ -0.07
C9orf47-201ENST00000334490 IFT80Q9P2H3 777 aaPredicted RBP14.59□□□□□ -0.07
C9orf47-201ENST00000334490 SMAD6O43541 496 aaKnown RBP14.59□□□□□ -0.07
C9orf47-201ENST00000334490 PGM3O95394 542 aa14.59□□□□□ -0.07
C9orf47-201ENST00000334490 POU2F1P14859 743 aa14.59□□□□□ -0.07
C9orf47-201ENST00000334490 FAM92BQ6ZTR7 304 aa14.59□□□□□ -0.07
C9orf47-201ENST00000334490 HTR3DQ70Z44 454 aa14.59□□□□□ -0.07
C9orf47-201ENST00000334490 PACS2Q86VP3 889 aa14.59□□□□□ -0.07
C9orf47-201ENST00000334490 TMEM126BQ8IUX1 230 aa14.59□□□□□ -0.07
C9orf47-201ENST00000334490 SLC34A3Q8N130 599 aa14.59□□□□□ -0.07
C9orf47-201ENST00000334490 ZIM2Q9NZV7 527 aa14.59□□□□□ -0.07
C9orf47-201ENST00000334490 GNB5O14775 395 aa14.58□□□□□ -0.07
C9orf47-201ENST00000334490 SHOX2O60902 331 aaPredicted RBP14.58□□□□□ -0.07
C9orf47-201ENST00000334490 LILRB3O75022 631 aa14.58□□□□□ -0.07
C9orf47-201ENST00000334490 C8orf89P0DMQ9 161 aa14.58□□□□□ -0.07
C9orf47-201ENST00000334490 ATF6P18850 670 aa14.58□□□□□ -0.07
C9orf47-201ENST00000334490 ZNF234Q14588 700 aa14.58□□□□□ -0.07
C9orf47-201ENST00000334490 CRTC1Q6UUV9 634 aa14.58□□□□□ -0.07
C9orf47-201ENST00000334490 PIGWQ7Z7B1 504 aa14.58□□□□□ -0.07
C9orf47-201ENST00000334490 RELL1Q8IUW5 271 aa14.58□□□□□ -0.07
C9orf47-201ENST00000334490 TMEM156Q8N614 296 aa14.58□□□□□ -0.07
C9orf47-201ENST00000334490 JPH3Q8WXH2 748 aaPredicted RBP14.58□□□□□ -0.07
C9orf47-201ENST00000334490 TRMT2BQ96GJ1 504 aaKnown RBP14.58□□□□□ -0.07
C9orf47-201ENST00000334490 CCNB1IP1Q9NPC3 277 aa14.58□□□□□ -0.07
C9orf47-201ENST00000334490 PAPOLBQ9NRJ5 636 aaKnown RBP14.58□□□□□ -0.07
C9orf47-201ENST00000334490 STRCQ7RTU9 1775 aa14.58□□□□□ -0.08
C9orf47-201ENST00000334490 PNMA8CA0A1B0GUJ8 204 aa14.58□□□□□ -0.08
C9orf47-201ENST00000334490 MGRN1O60291 552 aa14.58□□□□□ -0.08
C9orf47-201ENST00000334490 UGT2B11O75310 529 aa14.58□□□□□ -0.08
C9orf47-201ENST00000334490 ACTR3P61158 418 aa14.58□□□□□ -0.08
C9orf47-201ENST00000334490 EIPR1Q53HC9 387 aa14.58□□□□□ -0.08
C9orf47-201ENST00000334490 ZNF678Q5SXM1 525 aa14.58□□□□□ -0.08
C9orf47-201ENST00000334490 KIAA1161Q6NSJ0 714 aa14.58□□□□□ -0.08
C9orf47-201ENST00000334490 ALKAL1Q6UXT8 129 aa14.58□□□□□ -0.08
C9orf47-201ENST00000334490 SLC29A4Q7RTT9 530 aa14.58□□□□□ -0.08
C9orf47-201ENST00000334490 IZUMO1Q8IYV9 350 aa14.58□□□□□ -0.08
C9orf47-201ENST00000334490 OR7A2PQ8NGA2 310 aa14.58□□□□□ -0.08
C9orf47-201ENST00000334490 GTPBP3Q969Y2 492 aaKnown RBP14.58□□□□□ -0.08
C9orf47-201ENST00000334490 NOL6Q9H6R4 1146 aaKnown RBP14.58□□□□□ -0.08
C9orf47-201ENST00000334490 DLGAP4Q9Y2H0 992 aa14.58□□□□□ -0.08
C9orf47-201ENST00000334490 A8MUI8 341 aa14.58□□□□□ -0.08
C9orf47-201ENST00000334490 RFXAPO00287 272 aa14.58□□□□□ -0.08
C9orf47-201ENST00000334490 KIF1CO43896 1103 aaKnown RBP14.58□□□□□ -0.08
C9orf47-201ENST00000334490 HCN1O60741 890 aa14.58□□□□□ -0.08
C9orf47-201ENST00000334490 ENGP17813 658 aa14.58□□□□□ -0.08
C9orf47-201ENST00000334490 CD72P21854 359 aa14.58□□□□□ -0.08
C9orf47-201ENST00000334490 CASRP41180 1078 aa14.58□□□□□ -0.08
C9orf47-201ENST00000334490 GRK6P43250 576 aa14.58□□□□□ -0.08
C9orf47-201ENST00000334490 DSTNP60981 165 aa14.58□□□□□ -0.08
C9orf47-201ENST00000334490 SCARB2Q14108 478 aa14.58□□□□□ -0.08
C9orf47-201ENST00000334490 PCLAFQ15004 111 aa14.58□□□□□ -0.08
C9orf47-201ENST00000334490 RTL10Q7L3V2 364 aa14.58□□□□□ -0.08
C9orf47-201ENST00000334490 DENND1AQ8TEH3 1009 aa14.58□□□□□ -0.08
C9orf47-201ENST00000334490 GIPC3Q8TF64 312 aa14.58□□□□□ -0.08
C9orf47-201ENST00000334490 IL17FQ96PD4 163 aa14.58□□□□□ -0.08
C9orf47-201ENST00000334490 EPB41L1Q9H4G0 881 aa14.58□□□□□ -0.08
C9orf47-201ENST00000334490 FZD4Q9ULV1 537 aa14.58□□□□□ -0.08
C9orf47-201ENST00000334490 MRPS7Q9Y2R9 242 aaKnown RBP14.58□□□□□ -0.08
C9orf47-201ENST00000334490 OR6C74A6NCV1 312 aa14.58□□□□□ -0.08
C9orf47-201ENST00000334490 E7ESA3 106 aa14.58□□□□□ -0.08
C9orf47-201ENST00000334490 G6PDP11413 515 aa14.58□□□□□ -0.08
C9orf47-201ENST00000334490 AHCYP23526 432 aa14.58□□□□□ -0.08
C9orf47-201ENST00000334490 SLC6A4P31645 630 aa14.58□□□□□ -0.08
C9orf47-201ENST00000334490 PXNP49023 591 aaPredicted RBP14.58□□□□□ -0.08
C9orf47-201ENST00000334490 COX10Q12887 443 aa14.58□□□□□ -0.08
C9orf47-201ENST00000334490 RSBN1Q5VWQ0 802 aaPredicted RBP14.58□□□□□ -0.08
C9orf47-201ENST00000334490 OXR1Q8N573 874 aa14.58□□□□□ -0.08
C9orf47-201ENST00000334490 RPLP0P6Q8NHW5 317 aa14.58□□□□□ -0.08
C9orf47-201ENST00000334490 CGREF1Q99674 301 aa14.58□□□□□ -0.08
C9orf47-201ENST00000334490 HERPUD2Q9BSE4 406 aa14.58□□□□□ -0.08
C9orf47-201ENST00000334490 THUMPD1Q9NXG2 353 aaKnown RBP14.58□□□□□ -0.08
C9orf47-201ENST00000334490 STMN3Q9NZ72 180 aa14.58□□□□□ -0.08
C9orf47-201ENST00000334490 USP3Q9Y6I4 520 aa14.58□□□□□ -0.08
C9orf47-201ENST00000334490 MYH9P35579 1960 aaKnown RBP14.58□□□□□ -0.08
C9orf47-201ENST00000334490 TIAM2Q8IVF5 1701 aa14.57□□□□□ -0.08
C9orf47-201ENST00000334490 MYH7P12883 1935 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms