RNA–Protein interactions for RNA: ENST00000331222.5

CLN8-201, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN8, Length 7,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-201ENST00000331222 TBC1D15Q8TC07 691 aa10.32□□□□□ -0.76
CLN8-201ENST00000331222 HMGXB4Q9UGU5 601 aa10.32□□□□□ -0.76
CLN8-201ENST00000331222 SPEF2Q9C093 1822 aa10.32□□□□□ -0.76
CLN8-201ENST00000331222 A0A1W2PRB8 838 aa10.32□□□□□ -0.76
CLN8-201ENST00000331222 YJEFN3A6XGL0 299 aa10.32□□□□□ -0.76
CLN8-201ENST00000331222 LDOC1O95751 146 aaPredicted RBP10.32□□□□□ -0.76
CLN8-201ENST00000331222 HSD3B1P14060 373 aa10.32□□□□□ -0.76
CLN8-201ENST00000331222 IDH3AP50213 366 aa10.32□□□□□ -0.76
CLN8-201ENST00000331222 AP3S2P59780 193 aa10.32□□□□□ -0.76
CLN8-201ENST00000331222 RAB8AP61006 207 aa10.32□□□□□ -0.76
CLN8-201ENST00000331222 VTCN1Q7Z7D3 282 aa10.32□□□□□ -0.76
CLN8-201ENST00000331222 LAS2Q8IYD9 372 aa10.32□□□□□ -0.76
CLN8-201ENST00000331222 CMTM8Q8IZV2 173 aa10.32□□□□□ -0.76
CLN8-201ENST00000331222 OR5T1Q8NG75 326 aa10.32□□□□□ -0.76
CLN8-201ENST00000331222 PLD4Q96BZ4 506 aa10.32□□□□□ -0.76
CLN8-201ENST00000331222 PRR11Q96HE9 360 aaPredicted RBP10.32□□□□□ -0.76
CLN8-201ENST00000331222 NSMCE3Q96MG7 304 aa10.32□□□□□ -0.76
CLN8-201ENST00000331222 TGM7Q96PF1 710 aa10.32□□□□□ -0.76
CLN8-201ENST00000331222 SDC3O75056 442 aa10.32□□□□□ -0.76
CLN8-201ENST00000331222 RHBDL3P58872 404 aa10.32□□□□□ -0.76
CLN8-201ENST00000331222 CARD16Q5EG05 197 aa10.32□□□□□ -0.76
CLN8-201ENST00000331222 EGFLAMQ63HQ2 1017 aa10.32□□□□□ -0.76
CLN8-201ENST00000331222 CTU1Q7Z7A3 348 aaKnown RBP10.32□□□□□ -0.76
CLN8-201ENST00000331222 OR6N1Q8NGY5 312 aa10.32□□□□□ -0.76
CLN8-201ENST00000331222 SGIP1Q9BQI5 828 aa10.32□□□□□ -0.76
CLN8-201ENST00000331222 NPLQ9BXD5 320 aaPredicted RBP10.32□□□□□ -0.76
CLN8-201ENST00000331222 PCDHAC1Q9H158 963 aa10.32□□□□□ -0.76
CLN8-201ENST00000331222 S100A14Q9HCY8 104 aa10.32□□□□□ -0.76
CLN8-201ENST00000331222 SPATA7Q9P0W8 599 aa10.32□□□□□ -0.76
CLN8-201ENST00000331222 MYEF2Q9P2K5 600 aaKnown RBP10.32□□□□□ -0.76
CLN8-201ENST00000331222 NCANO14594 1321 aa10.31□□□□□ -0.76
CLN8-201ENST00000331222 M0R2N6 131 aa10.31□□□□□ -0.76
CLN8-201ENST00000331222 CNOT4O95628 575 aaKnown RBP10.31□□□□□ -0.76
CLN8-201ENST00000331222 C8GP07360 202 aa10.31□□□□□ -0.76
CLN8-201ENST00000331222 CFHP08603 1231 aa10.31□□□□□ -0.76
CLN8-201ENST00000331222 VAMP1P23763 118 aa10.31□□□□□ -0.76
CLN8-201ENST00000331222 CCR3P51677 355 aa10.31□□□□□ -0.76
CLN8-201ENST00000331222 PRR18Q8N4B5 295 aa10.31□□□□□ -0.76
CLN8-201ENST00000331222 TTYH1Q9H313 450 aaPredicted RBP10.31□□□□□ -0.76
CLN8-201ENST00000331222 TREM1Q9NP99 234 aa10.31□□□□□ -0.76
CLN8-201ENST00000331222 PDCD5O14737 125 aa10.31□□□□□ -0.76
CLN8-201ENST00000331222 MATN3O15232 486 aa10.31□□□□□ -0.76
CLN8-201ENST00000331222 CYP11A1P05108 521 aa10.31□□□□□ -0.76
CLN8-201ENST00000331222 RTP1P59025 263 aa10.31□□□□□ -0.76
CLN8-201ENST00000331222 OLR1P78380 273 aa10.31□□□□□ -0.76
CLN8-201ENST00000331222 EIPR1Q53HC9 387 aa10.31□□□□□ -0.76
CLN8-201ENST00000331222 FRMD7Q6ZUT3 714 aa10.31□□□□□ -0.76
CLN8-201ENST00000331222 OR1F2PQ96R84 312 aa10.31□□□□□ -0.76
CLN8-201ENST00000331222 CCNL2Q96S94 520 aaPredicted RBP10.31□□□□□ -0.76
CLN8-201ENST00000331222 USB1Q9BQ65 265 aaKnown RBP10.31□□□□□ -0.76
CLN8-201ENST00000331222 C11orf84Q9BUA3 381 aaPredicted RBP10.31□□□□□ -0.76
CLN8-201ENST00000331222 PRDM16Q9HAZ2 1276 aa10.31□□□□□ -0.76
CLN8-201ENST00000331222 GRPRP30550 384 aa10.31□□□□□ -0.76
CLN8-201ENST00000331222 NSG1P42857 185 aa10.31□□□□□ -0.76
CLN8-201ENST00000331222 VSX2P58304 361 aaPredicted RBP10.31□□□□□ -0.76
CLN8-201ENST00000331222 C1orf61Q13536 156 aa10.31□□□□□ -0.76
CLN8-201ENST00000331222 LAPTM4AQ15012 233 aa10.31□□□□□ -0.76
CLN8-201ENST00000331222 TAF1AQ15573 450 aaPredicted RBP10.31□□□□□ -0.76
CLN8-201ENST00000331222 XKRXQ6PP77 449 aa10.31□□□□□ -0.76
CLN8-201ENST00000331222 LYSMD3Q7Z3D4 306 aa10.31□□□□□ -0.76
CLN8-201ENST00000331222 RGMAQ96B86 450 aa10.31□□□□□ -0.76
CLN8-201ENST00000331222 ZNF717Q9BY31 904 aaPredicted RBP10.31□□□□□ -0.76
CLN8-201ENST00000331222 WDR12Q9GZL7 423 aaKnown RBP10.31□□□□□ -0.76
CLN8-201ENST00000331222 REV1Q9UBZ9 1251 aa10.31□□□□□ -0.76
CLN8-201ENST00000331222 CYTH4Q9UIA0 394 aa10.31□□□□□ -0.76
CLN8-201ENST00000331222 AOC1P19801 751 aa10.31□□□□□ -0.76
CLN8-201ENST00000331222 PTX3P26022 381 aaPredicted RBP10.31□□□□□ -0.76
CLN8-201ENST00000331222 OTX2P32243 289 aa10.31□□□□□ -0.76
CLN8-201ENST00000331222 NR1H2P55055 460 aa10.31□□□□□ -0.76
CLN8-201ENST00000331222 PDCD4Q53EL6 469 aaKnown RBP10.31□□□□□ -0.76
CLN8-201ENST00000331222 UBE2UQ5VVX9 321 aa10.31□□□□□ -0.76
CLN8-201ENST00000331222 RBM15BQ8NDT2 890 aaKnown RBP10.31□□□□□ -0.76
CLN8-201ENST00000331222 B3GAT2Q9NPZ5 323 aa10.31□□□□□ -0.76
CLN8-201ENST00000331222 FARSBQ9NSD9 589 aaKnown RBP10.31□□□□□ -0.76
CLN8-201ENST00000331222 FBXW11Q9UKB1 542 aa10.31□□□□□ -0.76
CLN8-201ENST00000331222 FZD4Q9ULV1 537 aa10.31□□□□□ -0.76
CLN8-201ENST00000331222 SPIN1Q9Y657 262 aaPredicted RBP10.31□□□□□ -0.76
CLN8-201ENST00000331222 J3KR12 359 aa10.31□□□□□ -0.76
CLN8-201ENST00000331222 ENGP17813 658 aa10.31□□□□□ -0.76
CLN8-201ENST00000331222 HK1P19367 917 aa10.31□□□□□ -0.76
CLN8-201ENST00000331222 CD53P19397 219 aa10.31□□□□□ -0.76
CLN8-201ENST00000331222 MATN1P21941 496 aa10.31□□□□□ -0.76
CLN8-201ENST00000331222 ILF2Q12905 390 aaKnown RBP10.31□□□□□ -0.76
CLN8-201ENST00000331222 TIGD5Q53EQ6 642 aa10.31□□□□□ -0.76
CLN8-201ENST00000331222 PRAMEF14Q5SWL7 426 aa10.31□□□□□ -0.76
CLN8-201ENST00000331222 RNF220Q5VTB9 566 aa10.31□□□□□ -0.76
CLN8-201ENST00000331222 PRAMEF13Q5VWM6 474 aa10.31□□□□□ -0.76
CLN8-201ENST00000331222 FIP1L1Q6UN15 594 aaKnown RBP10.31□□□□□ -0.76
CLN8-201ENST00000331222 IRF2BP2Q7Z5L9 587 aa10.31□□□□□ -0.76
CLN8-201ENST00000331222 ZNF761Q86XN6 746 aaPredicted RBP10.31□□□□□ -0.76
CLN8-201ENST00000331222 GPALPP1Q8IXQ4 340 aa10.31□□□□□ -0.76
CLN8-201ENST00000331222 CCDC36Q8IYA8 594 aa10.31□□□□□ -0.76
CLN8-201ENST00000331222 POGLUT1Q8NBL1 392 aa10.31□□□□□ -0.76
CLN8-201ENST00000331222 UNC93B1Q9H1C4 597 aa10.31□□□□□ -0.76
CLN8-201ENST00000331222 GLS2Q9UI32 602 aa10.31□□□□□ -0.76
CLN8-201ENST00000331222 CD2P06729 351 aa10.3□□□□□ -0.76
CLN8-201ENST00000331222 GDF5P43026 501 aa10.3□□□□□ -0.76
CLN8-201ENST00000331222 PTPRCAPQ14761 206 aa10.3□□□□□ -0.76
CLN8-201ENST00000331222 USF2Q15853 346 aaPredicted RBP10.3□□□□□ -0.76
CLN8-201ENST00000331222 SGCAQ16586 387 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms