RNA–Protein interactions for RNA: ENST00000330394.2

EPHB3-201, Transcript of EPH receptor B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHB3, Length 4,236 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3-201ENST00000330394 LARP4Q71RC2 724 aaKnown RBP eCLIP13.68□□□□□ -0.22
EPHB3-201ENST00000330394 RNF180Q86T96 592 aa13.68□□□□□ -0.22
EPHB3-201ENST00000330394 AQP11Q8NBQ7 271 aa13.68□□□□□ -0.22
EPHB3-201ENST00000330394 OR52L1Q8NGH7 329 aa13.68□□□□□ -0.22
EPHB3-201ENST00000330394 ZNF486Q96H40 463 aaPredicted RBP13.68□□□□□ -0.22
EPHB3-201ENST00000330394 ZBTB20Q9HC78 741 aaPredicted RBP13.68□□□□□ -0.22
EPHB3-201ENST00000330394 CCDC177Q9NQR7 707 aaPredicted RBP13.68□□□□□ -0.22
EPHB3-201ENST00000330394 RBPJLQ9UBG7 517 aa13.68□□□□□ -0.22
EPHB3-201ENST00000330394 ARID1AO14497 2285 aa13.68□□□□□ -0.22
EPHB3-201ENST00000330394 COL1A2P08123 1366 aa13.68□□□□□ -0.22
EPHB3-201ENST00000330394 A0A0G2JN53 185 aa13.68□□□□□ -0.22
EPHB3-201ENST00000330394 A0A0U1RQS6 177 aa13.68□□□□□ -0.22
EPHB3-201ENST00000330394 AQP9O43315 295 aa13.68□□□□□ -0.22
EPHB3-201ENST00000330394 TLX2O43763 284 aaPredicted RBP13.68□□□□□ -0.22
EPHB3-201ENST00000330394 EEDO75530 441 aaKnown RBP13.68□□□□□ -0.22
EPHB3-201ENST00000330394 PRPS1L1P21108 318 aa13.68□□□□□ -0.22
EPHB3-201ENST00000330394 GABRB3P28472 473 aa13.68□□□□□ -0.22
EPHB3-201ENST00000330394 TEAD4Q15561 434 aa13.68□□□□□ -0.22
EPHB3-201ENST00000330394 KCNA10Q16322 511 aa13.68□□□□□ -0.22
EPHB3-201ENST00000330394 C1orf52Q8N6N3 182 aaKnown RBP13.68□□□□□ -0.22
EPHB3-201ENST00000330394 OR4K1Q8NGD4 311 aa13.68□□□□□ -0.22
EPHB3-201ENST00000330394 RAD51AP1Q96B01 352 aa13.68□□□□□ -0.22
EPHB3-201ENST00000330394 MAGEH1Q9H213 219 aa13.68□□□□□ -0.22
EPHB3-201ENST00000330394 TM9SF3Q9HD45 589 aa13.68□□□□□ -0.22
EPHB3-201ENST00000330394 NECTIN3Q9NQS3 549 aa13.68□□□□□ -0.22
EPHB3-201ENST00000330394 GPR83Q9NYM4 423 aa13.68□□□□□ -0.22
EPHB3-201ENST00000330394 FLRT1Q9NZU1 646 aa13.68□□□□□ -0.22
EPHB3-201ENST00000330394 VAPAQ9P0L0 249 aa13.68□□□□□ -0.22
EPHB3-201ENST00000330394 N6AMT1Q9Y5N5 214 aa13.68□□□□□ -0.22
EPHB3-201ENST00000330394 NUP205Q92621 2012 aa13.68□□□□□ -0.22
EPHB3-201ENST00000330394 ASCC3Q8N3C0 2202 aaKnown RBP13.68□□□□□ -0.22
EPHB3-201ENST00000330394 TCRBV5S1A1TA0A578 114 aa13.68□□□□□ -0.22
EPHB3-201ENST00000330394 MAFKO60675 156 aa13.68□□□□□ -0.22
EPHB3-201ENST00000330394 CH25HO95992 272 aa13.68□□□□□ -0.22
EPHB3-201ENST00000330394 SPAM1P38567 509 aa13.68□□□□□ -0.22
EPHB3-201ENST00000330394 ALDH3B2P48448 385 aa13.68□□□□□ -0.22
EPHB3-201ENST00000330394 DUS1LQ6P1R4 473 aaKnown RBP13.68□□□□□ -0.22
EPHB3-201ENST00000330394 FAM20CQ8IXL6 584 aa13.68□□□□□ -0.22
EPHB3-201ENST00000330394 TSPEARQ8WU66 669 aa13.68□□□□□ -0.22
EPHB3-201ENST00000330394 NCSTNQ92542 709 aa13.68□□□□□ -0.22
EPHB3-201ENST00000330394 USP7Q93009 1102 aa13.68□□□□□ -0.22
EPHB3-201ENST00000330394 BOLA1Q9Y3E2 137 aa13.68□□□□□ -0.22
EPHB3-201ENST00000330394 UBE2QL1A1L167 161 aa13.67□□□□□ -0.22
EPHB3-201ENST00000330394 PCDH8O95206 1070 aa13.67□□□□□ -0.22
EPHB3-201ENST00000330394 CRHBPP24387 322 aa13.67□□□□□ -0.22
EPHB3-201ENST00000330394 NTSP30990 170 aa13.67□□□□□ -0.22
EPHB3-201ENST00000330394 HTR7P34969 479 aa13.67□□□□□ -0.22
EPHB3-201ENST00000330394 HTR2BP41595 481 aa13.67□□□□□ -0.22
EPHB3-201ENST00000330394 STAT5AP42229 794 aa13.67□□□□□ -0.22
EPHB3-201ENST00000330394 EMX1Q04741 257 aaPredicted RBP13.67□□□□□ -0.22
EPHB3-201ENST00000330394 NPRL3Q12980 569 aa13.67□□□□□ -0.22
EPHB3-201ENST00000330394 HNRNPA0Q13151 305 aaKnown RBP13.67□□□□□ -0.22
EPHB3-201ENST00000330394 C10orf62Q5T681 223 aaPredicted RBP13.67□□□□□ -0.22
EPHB3-201ENST00000330394 C9orf131Q5VYM1 1079 aa13.67□□□□□ -0.22
EPHB3-201ENST00000330394 CES4AQ5XG92 561 aa13.67□□□□□ -0.22
EPHB3-201ENST00000330394 IKBIPQ70UQ0 350 aa13.67□□□□□ -0.22
EPHB3-201ENST00000330394 CCDC28AQ8IWP9 274 aa13.67□□□□□ -0.22
EPHB3-201ENST00000330394 CHPT1Q8WUD6 406 aa13.67□□□□□ -0.22
EPHB3-201ENST00000330394 KCTD7Q96MP8 289 aa13.67□□□□□ -0.22
EPHB3-201ENST00000330394 IL1RAPQ9NPH3 570 aa13.67□□□□□ -0.22
EPHB3-201ENST00000330394 RUVBL1Q9Y265 456 aaKnown RBP13.67□□□□□ -0.22
EPHB3-201ENST00000330394 A0A0D9SEW6 157 aa13.67□□□□□ -0.22
EPHB3-201ENST00000330394 C12orf71A8MTZ7 269 aa13.67□□□□□ -0.22
EPHB3-201ENST00000330394 MANBAO00462 879 aa13.67□□□□□ -0.22
EPHB3-201ENST00000330394 TGFB1P01137 390 aa13.67□□□□□ -0.22
EPHB3-201ENST00000330394 URODP06132 367 aa13.67□□□□□ -0.22
EPHB3-201ENST00000330394 CPN2P22792 545 aa13.67□□□□□ -0.22
EPHB3-201ENST00000330394 PTCHD3Q3KNS1 767 aa13.67□□□□□ -0.22
EPHB3-201ENST00000330394 CYBRD1Q53TN4 286 aa13.67□□□□□ -0.22
EPHB3-201ENST00000330394 CRB2Q5IJ48 1285 aa13.67□□□□□ -0.22
EPHB3-201ENST00000330394 LIPKQ5VXJ0 399 aa13.67□□□□□ -0.22
EPHB3-201ENST00000330394 MBOAT1Q6ZNC8 495 aa13.67□□□□□ -0.22
EPHB3-201ENST00000330394 TCEANCQ8N8B7 351 aa13.67□□□□□ -0.22
EPHB3-201ENST00000330394 KLHL6Q8WZ60 621 aa13.67□□□□□ -0.22
EPHB3-201ENST00000330394 M0R129 80 aa13.67□□□□□ -0.22
EPHB3-201ENST00000330394 AP1G1O43747 822 aa13.67□□□□□ -0.22
EPHB3-201ENST00000330394 KDELR2P33947 212 aa13.67□□□□□ -0.22
EPHB3-201ENST00000330394 STARP49675 285 aa13.67□□□□□ -0.22
EPHB3-201ENST00000330394 CLK3P49761 638 aaKnown RBP13.67□□□□□ -0.22
EPHB3-201ENST00000330394 HSF5Q4G112 596 aaPredicted RBP13.67□□□□□ -0.22
EPHB3-201ENST00000330394 FBXO43Q4G163 708 aa13.67□□□□□ -0.22
EPHB3-201ENST00000330394 PRDM8Q9NQV8 689 aa13.67□□□□□ -0.22
EPHB3-201ENST00000330394 RPS6KB2Q9UBS0 482 aa13.67□□□□□ -0.22
EPHB3-201ENST00000330394 ENPP5Q9UJA9 477 aa13.67□□□□□ -0.22
EPHB3-201ENST00000330394 LAMB4A4D0S4 1761 aa13.67□□□□□ -0.22
EPHB3-201ENST00000330394 TNFRSF1BP20333 461 aa13.66□□□□□ -0.22
EPHB3-201ENST00000330394 HTR1BP28222 390 aa13.66□□□□□ -0.22
EPHB3-201ENST00000330394 SCARB2Q14108 478 aa13.66□□□□□ -0.22
EPHB3-201ENST00000330394 TAZQ16635 292 aa13.66□□□□□ -0.22
EPHB3-201ENST00000330394 FRG2Q64ET8 278 aa13.66□□□□□ -0.22
EPHB3-201ENST00000330394 RD3Q7Z3Z2 195 aa13.66□□□□□ -0.22
EPHB3-201ENST00000330394 ZFAND4Q86XD8 727 aa13.66□□□□□ -0.22
EPHB3-201ENST00000330394 BPIFB1Q8TDL5 484 aa13.66□□□□□ -0.22
EPHB3-201ENST00000330394 FRG2BQ96QU4 278 aa13.66□□□□□ -0.22
EPHB3-201ENST00000330394 TTPALQ9BTX7 342 aa13.66□□□□□ -0.22
EPHB3-201ENST00000330394 KLHL31Q9H511 634 aa13.66□□□□□ -0.22
EPHB3-201ENST00000330394 CCSER2Q9H7U1 834 aa13.66□□□□□ -0.22
EPHB3-201ENST00000330394 SIAEQ9HAT2 523 aa13.66□□□□□ -0.22
EPHB3-201ENST00000330394 VPS29Q9UBQ0 182 aa13.66□□□□□ -0.22
EPHB3-201ENST00000330394 NUFIP1Q9UHK0 495 aaKnown RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms