RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 IGKV1-8A0A0C4DH67 115 aa26.42■■□□□ 1.82
ATPAF1-201ENST00000329231 LOC102723532A0A0G2JNH3 316 aa26.42■■□□□ 1.82
ATPAF1-201ENST00000329231 PABPN1LA6NDY0 278 aaKnown RBP26.42■■□□□ 1.82
ATPAF1-201ENST00000329231 TSPAN12O95859 305 aa26.42■■□□□ 1.82
ATPAF1-201ENST00000329231 PLTPP55058 493 aa26.42■■□□□ 1.82
ATPAF1-201ENST00000329231 SLC9A5Q14940 896 aa26.42■■□□□ 1.82
ATPAF1-201ENST00000329231 ZNF425Q6IV72 752 aa26.42■■□□□ 1.82
ATPAF1-201ENST00000329231 CAPN12Q6ZSI9 719 aa26.42■■□□□ 1.82
ATPAF1-201ENST00000329231 RAB43Q86YS6 212 aa26.42■■□□□ 1.82
ATPAF1-201ENST00000329231 OR4N4Q8N0Y3 316 aa26.42■■□□□ 1.82
ATPAF1-201ENST00000329231 PHACTR1Q9C0D0 580 aa26.42■■□□□ 1.82
ATPAF1-201ENST00000329231 PCBD2Q9H0N5 130 aa26.42■■□□□ 1.82
ATPAF1-201ENST00000329231 PTRH2Q9Y3E5 179 aaKnown RBP26.42■■□□□ 1.82
ATPAF1-201ENST00000329231 PCM1Q15154 2024 aa26.41■■□□□ 1.82
ATPAF1-201ENST00000329231 HYKKA2RU49 373 aa26.41■■□□□ 1.82
ATPAF1-201ENST00000329231 EIF2S1P05198 315 aaKnown RBP26.41■■□□□ 1.82
ATPAF1-201ENST00000329231 PLA2G2AP14555 144 aa26.41■■□□□ 1.82
ATPAF1-201ENST00000329231 EZRP15311 586 aaKnown RBP26.41■■□□□ 1.82
ATPAF1-201ENST00000329231 FOLR3P41439 243 aa26.41■■□□□ 1.82
ATPAF1-201ENST00000329231 RELAQ04206 551 aa26.41■■□□□ 1.82
ATPAF1-201ENST00000329231 SSPNQ14714 243 aa26.41■■□□□ 1.82
ATPAF1-201ENST00000329231 MRPL14Q6P1L8 145 aaKnown RBP26.41■■□□□ 1.82
ATPAF1-201ENST00000329231 MNS1Q8NEH6 495 aa26.41■■□□□ 1.82
ATPAF1-201ENST00000329231 CDKL2Q92772 493 aa26.41■■□□□ 1.82
ATPAF1-201ENST00000329231 TRIM54Q9BYV2 358 aa26.41■■□□□ 1.82
ATPAF1-201ENST00000329231 ZNF71Q9NQZ8 489 aaPredicted RBP26.41■■□□□ 1.82
ATPAF1-201ENST00000329231 TLK1Q9UKI8 766 aa26.41■■□□□ 1.82
ATPAF1-201ENST00000329231 CFAP46Q8IYW2 2715 aa26.4■■□□□ 1.82
ATPAF1-201ENST00000329231 FAM95CA0A1B0GW59 222 aa26.4■■□□□ 1.82
ATPAF1-201ENST00000329231 ARGFXA6NJG6 315 aa26.4■■□□□ 1.82
ATPAF1-201ENST00000329231 H0YGG7 62 aa26.4■■□□□ 1.82
ATPAF1-201ENST00000329231 ONECUT2O95948 504 aa26.4■■□□□ 1.82
ATPAF1-201ENST00000329231 HRH2P25021 359 aa26.4■■□□□ 1.82
ATPAF1-201ENST00000329231 SSTR1P30872 391 aa26.4■■□□□ 1.82
ATPAF1-201ENST00000329231 ARF3P61204 181 aaPredicted RBP26.4■■□□□ 1.82
ATPAF1-201ENST00000329231 TBPL1P62380 186 aa26.4■■□□□ 1.82
ATPAF1-201ENST00000329231 PHKG1Q16816 387 aa26.4■■□□□ 1.82
ATPAF1-201ENST00000329231 LACTB2Q53H82 288 aaPredicted RBP26.4■■□□□ 1.82
ATPAF1-201ENST00000329231 C8orf74Q6P047 294 aa26.4■■□□□ 1.82
ATPAF1-201ENST00000329231 AGTRAPQ6RW13 159 aa26.4■■□□□ 1.82
ATPAF1-201ENST00000329231 PRICKLE2Q7Z3G6 844 aa26.4■■□□□ 1.82
ATPAF1-201ENST00000329231 ADCK2Q7Z695 626 aa26.4■■□□□ 1.82
ATPAF1-201ENST00000329231 OR2Y1Q8NGV0 311 aa26.4■■□□□ 1.82
ATPAF1-201ENST00000329231 FKBP10Q96AY3 582 aa26.4■■□□□ 1.82
ATPAF1-201ENST00000329231 PDLIM5Q96HC4 596 aaKnown RBP26.4■■□□□ 1.82
ATPAF1-201ENST00000329231 IP6K3Q96PC2 410 aa26.4■■□□□ 1.82
ATPAF1-201ENST00000329231 ING2Q9H160 280 aa26.4■■□□□ 1.82
ATPAF1-201ENST00000329231 RHOJQ9H4E5 214 aa26.4■■□□□ 1.82
ATPAF1-201ENST00000329231 ACSS2Q9NR19 701 aa26.4■■□□□ 1.82
ATPAF1-201ENST00000329231 SPTA1P02549 2419 aa26.39■■□□□ 1.82
ATPAF1-201ENST00000329231 FER1L5A0AVI2 2057 aa26.39■■□□□ 1.82
ATPAF1-201ENST00000329231 SLC28A2O43868 658 aa26.39■■□□□ 1.82
ATPAF1-201ENST00000329231 ALBP02768 609 aa26.39■■□□□ 1.82
ATPAF1-201ENST00000329231 ITGAXP20702 1163 aa26.39■■□□□ 1.82
ATPAF1-201ENST00000329231 SAT1P21673 171 aa26.39■■□□□ 1.82
ATPAF1-201ENST00000329231 CCND1P24385 295 aa26.39■■□□□ 1.82
ATPAF1-201ENST00000329231 PGGT1BP53609 377 aa26.39■■□□□ 1.82
ATPAF1-201ENST00000329231 AP1S2P56377 157 aa26.39■■□□□ 1.82
ATPAF1-201ENST00000329231 PRAMEF13Q5VWM6 474 aa26.39■■□□□ 1.82
ATPAF1-201ENST00000329231 TCTN3Q6NUS6 607 aa26.39■■□□□ 1.82
ATPAF1-201ENST00000329231 MBOAT1Q6ZNC8 495 aa26.39■■□□□ 1.82
ATPAF1-201ENST00000329231 CYS1Q717R9 158 aa26.39■■□□□ 1.82
ATPAF1-201ENST00000329231 RERGQ96A58 199 aaPredicted RBP26.39■■□□□ 1.82
ATPAF1-201ENST00000329231 PTERQ96BW5 349 aa26.39■■□□□ 1.82
ATPAF1-201ENST00000329231 VPS39Q96JC1 886 aa26.39■■□□□ 1.82
ATPAF1-201ENST00000329231 TRIM55Q9BYV6 548 aa26.39■■□□□ 1.82
ATPAF1-201ENST00000329231 SLC22A11Q9NSA0 550 aa26.39■■□□□ 1.82
ATPAF1-201ENST00000329231 TLN1Q9Y490 2541 aaKnown RBP26.39■■□□□ 1.81
ATPAF1-201ENST00000329231 ZNF462Q96JM2 2506 aa26.38■■□□□ 1.81
ATPAF1-201ENST00000329231 ENO2P09104 434 aaPredicted RBP26.38■■□□□ 1.81
ATPAF1-201ENST00000329231 GSTA2P09210 222 aa26.38■■□□□ 1.81
ATPAF1-201ENST00000329231 ZNF37AP17032 561 aaPredicted RBP26.38■■□□□ 1.81
ATPAF1-201ENST00000329231 OTX2P32243 289 aa26.38■■□□□ 1.81
ATPAF1-201ENST00000329231 EMP3P54852 163 aa26.38■■□□□ 1.81
ATPAF1-201ENST00000329231 MUM1Q2TAK8 710 aa26.38■■□□□ 1.81
ATPAF1-201ENST00000329231 CPZQ66K79 652 aa26.38■■□□□ 1.81
ATPAF1-201ENST00000329231 C3orf62Q6ZUJ4 267 aa26.38■■□□□ 1.81
ATPAF1-201ENST00000329231 OVCH1Q7RTY7 1134 aa26.38■■□□□ 1.81
ATPAF1-201ENST00000329231 NKAPQ8N5F7 415 aaKnown RBP26.38■■□□□ 1.81
ATPAF1-201ENST00000329231 TMEM102Q8N9M5 508 aaPredicted RBP26.38■■□□□ 1.81
ATPAF1-201ENST00000329231 FBXO25Q8TCJ0 367 aa26.38■■□□□ 1.81
ATPAF1-201ENST00000329231 OR2A5Q96R48 311 aa26.38■■□□□ 1.81
ATPAF1-201ENST00000329231 ATG10Q9H0Y0 220 aa26.38■■□□□ 1.81
ATPAF1-201ENST00000329231 SMYD2Q9NRG4 433 aa26.38■■□□□ 1.81
ATPAF1-201ENST00000329231 TMEM184CQ9NVA4 438 aa26.38■■□□□ 1.81
ATPAF1-201ENST00000329231 CUEDC1Q9NWM3 386 aaPredicted RBP26.38■■□□□ 1.81
ATPAF1-201ENST00000329231 ARL15Q9NXU5 204 aa26.38■■□□□ 1.81
ATPAF1-201ENST00000329231 TXNDC16Q9P2K2 825 aa26.38■■□□□ 1.81
ATPAF1-201ENST00000329231 H7BY64 318 aa26.37■■□□□ 1.81
ATPAF1-201ENST00000329231 TXNDC9O14530 226 aa26.37■■□□□ 1.81
ATPAF1-201ENST00000329231 CNOT3O75175 753 aaKnown RBP26.37■■□□□ 1.81
ATPAF1-201ENST00000329231 DNAJB5O75953 348 aa26.37■■□□□ 1.81
ATPAF1-201ENST00000329231 RRADP55042 308 aa26.37■■□□□ 1.81
ATPAF1-201ENST00000329231 NAE1Q13564 534 aa26.37■■□□□ 1.81
ATPAF1-201ENST00000329231 PRTGQ2VWP7 1150 aa26.37■■□□□ 1.81
ATPAF1-201ENST00000329231 PRMT9Q6P2P2 845 aa26.37■■□□□ 1.81
ATPAF1-201ENST00000329231 MED25Q71SY5 747 aa26.37■■□□□ 1.81
ATPAF1-201ENST00000329231 PTRH1Q86Y79 214 aaKnown RBP26.37■■□□□ 1.81
ATPAF1-201ENST00000329231 MMGT1Q8N4V1 131 aa26.37■■□□□ 1.81
ATPAF1-201ENST00000329231 CSNK1A1LQ8N752 337 aa26.37■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms