RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 ATP6V1B1P15313 513 aa7.32□□□□□ -1.24
IFT88-201ENST00000319980 PRPS1L1P21108 318 aa7.32□□□□□ -1.24
IFT88-201ENST00000319980 CDKN2CP42773 168 aa7.32□□□□□ -1.24
IFT88-201ENST00000319980 MAGEA10P43363 369 aaPredicted RBP7.32□□□□□ -1.24
IFT88-201ENST00000319980 CSTF3Q12996 717 aaKnown RBP7.32□□□□□ -1.24
IFT88-201ENST00000319980 NHSL2Q5HYW2 709 aa7.32□□□□□ -1.24
IFT88-201ENST00000319980 INTS11Q5TA45 600 aaKnown RBP7.32□□□□□ -1.24
IFT88-201ENST00000319980 GRHL2Q6ISB3 625 aa7.32□□□□□ -1.24
IFT88-201ENST00000319980 KRT80Q6KB66 452 aa7.32□□□□□ -1.24
IFT88-201ENST00000319980 CAPN13Q6MZZ7 669 aaPredicted RBP7.32□□□□□ -1.24
IFT88-201ENST00000319980 APLFQ8IW19 511 aaPredicted RBP7.32□□□□□ -1.24
IFT88-201ENST00000319980 RIMKLAQ8IXN7 391 aa7.32□□□□□ -1.24
IFT88-201ENST00000319980 C10orf111Q8N326 155 aa7.32□□□□□ -1.24
IFT88-201ENST00000319980 TMEM132CQ8N3T6 1108 aa7.32□□□□□ -1.24
IFT88-201ENST00000319980 FAM86B1Q8N7N1 296 aa7.32□□□□□ -1.24
IFT88-201ENST00000319980 PAPD5Q8NDF8 572 aaKnown RBP7.32□□□□□ -1.24
IFT88-201ENST00000319980 ZNF548Q8NEK5 533 aaPredicted RBP7.32□□□□□ -1.24
IFT88-201ENST00000319980 OR7A2PQ8NGA2 310 aa7.32□□□□□ -1.24
IFT88-201ENST00000319980 HUS1BQ8NHY5 278 aa7.32□□□□□ -1.24
IFT88-201ENST00000319980 ITCHQ96J02 903 aa7.32□□□□□ -1.24
IFT88-201ENST00000319980 ZNF514Q96K75 400 aaPredicted RBP7.32□□□□□ -1.24
IFT88-201ENST00000319980 C9orf16Q9BUW7 83 aa7.32□□□□□ -1.24
IFT88-201ENST00000319980 REXO4Q9GZR2 422 aaKnown RBP7.32□□□□□ -1.24
IFT88-201ENST00000319980 NKX2-4Q9H2Z4 354 aa7.32□□□□□ -1.24
IFT88-201ENST00000319980 KAT8Q9H7Z6 458 aaKnown RBP7.32□□□□□ -1.24
IFT88-201ENST00000319980 SPATA6Q9NWH7 488 aaPredicted RBP7.32□□□□□ -1.24
IFT88-201ENST00000319980 OBP2AQ9NY56 170 aa7.32□□□□□ -1.24
IFT88-201ENST00000319980 ASF1AQ9Y294 204 aa7.32□□□□□ -1.24
IFT88-201ENST00000319980 NPIPB8E9PQR5 432 aa7.32□□□□□ -1.24
IFT88-201ENST00000319980 EI24O14681 340 aa7.32□□□□□ -1.24
IFT88-201ENST00000319980 ACOX3O15254 700 aa7.32□□□□□ -1.24
IFT88-201ENST00000319980 MID1O15344 667 aa7.32□□□□□ -1.24
IFT88-201ENST00000319980 PCCBP05166 539 aa7.32□□□□□ -1.24
IFT88-201ENST00000319980 CDH1P12830 882 aa7.32□□□□□ -1.24
IFT88-201ENST00000319980 NPPBP16860 134 aa7.32□□□□□ -1.24
IFT88-201ENST00000319980 ZNF23P17027 643 aa7.32□□□□□ -1.24
IFT88-201ENST00000319980 GDI1P31150 447 aa7.32□□□□□ -1.24
IFT88-201ENST00000319980 POLE2P56282 527 aa7.32□□□□□ -1.24
IFT88-201ENST00000319980 TMEM52BQ4KMG9 183 aa7.32□□□□□ -1.24
IFT88-201ENST00000319980 TMTC4Q5T4D3 741 aa7.32□□□□□ -1.24
IFT88-201ENST00000319980 PIP5KL1Q5T9C9 394 aa7.32□□□□□ -1.24
IFT88-201ENST00000319980 THEMIS2Q5TEJ8 643 aa7.32□□□□□ -1.24
IFT88-201ENST00000319980 ANKRD26P1Q6NSI1 321 aa7.32□□□□□ -1.24
IFT88-201ENST00000319980 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.32□□□□□ -1.24
IFT88-201ENST00000319980 SLCO4C1Q6ZQN7 724 aa7.32□□□□□ -1.24
IFT88-201ENST00000319980 HEATR4Q86WZ0 1026 aa7.32□□□□□ -1.24
IFT88-201ENST00000319980 CHERPQ8IWX8 916 aaKnown RBP7.32□□□□□ -1.24
IFT88-201ENST00000319980 C2orf73Q8N5S3 287 aaPredicted RBP7.32□□□□□ -1.24
IFT88-201ENST00000319980 AADATQ8N5Z0 425 aa7.32□□□□□ -1.24
IFT88-201ENST00000319980 C1orf52Q8N6N3 182 aaKnown RBP7.32□□□□□ -1.24
IFT88-201ENST00000319980 GPR156Q8NFN8 814 aa7.32□□□□□ -1.24
IFT88-201ENST00000319980 OR2L2Q8NH16 312 aa7.32□□□□□ -1.24
IFT88-201ENST00000319980 MAGEE2Q8TD90 523 aaPredicted RBP7.32□□□□□ -1.24
IFT88-201ENST00000319980 NCLNQ969V3 563 aa7.32□□□□□ -1.24
IFT88-201ENST00000319980 FAM120BQ96EK7 910 aaKnown RBP7.32□□□□□ -1.24
IFT88-201ENST00000319980 HIC2Q96JB3 615 aa7.32□□□□□ -1.24
IFT88-201ENST00000319980 PANX1Q96RD7 426 aa7.32□□□□□ -1.24
IFT88-201ENST00000319980 RPP25Q9BUL9 199 aaKnown RBP7.32□□□□□ -1.24
IFT88-201ENST00000319980 BDH2Q9BUT1 245 aa7.32□□□□□ -1.24
IFT88-201ENST00000319980 LGR4Q9BXB1 951 aa7.32□□□□□ -1.24
IFT88-201ENST00000319980 OSBPL6Q9BZF3 934 aa7.32□□□□□ -1.24
IFT88-201ENST00000319980 GPR34Q9UPC5 381 aa7.32□□□□□ -1.24
IFT88-201ENST00000319980 TRBV5-3A0A0A0MS03 114 aa7.31□□□□□ -1.24
IFT88-201ENST00000319980 C17orf113A0A1B0GUU1 675 aa7.31□□□□□ -1.24
IFT88-201ENST00000319980 SERTM1A2A2V5 107 aa7.31□□□□□ -1.24
IFT88-201ENST00000319980 PLOD2O00469 737 aa7.31□□□□□ -1.24
IFT88-201ENST00000319980 CXCR6O00574 342 aa7.31□□□□□ -1.24
IFT88-201ENST00000319980 DLGAP1O14490 977 aa7.31□□□□□ -1.24
IFT88-201ENST00000319980 VEGFDO43915 354 aa7.31□□□□□ -1.24
IFT88-201ENST00000319980 CLPTM1O96005 669 aa7.31□□□□□ -1.24
IFT88-201ENST00000319980 MYCLP1P12525 358 aaPredicted RBP7.31□□□□□ -1.24
IFT88-201ENST00000319980 COX7A2P14406 83 aa7.31□□□□□ -1.24
IFT88-201ENST00000319980 EFNA1P20827 205 aaPredicted RBP7.31□□□□□ -1.24
IFT88-201ENST00000319980 DRD3P35462 400 aa7.31□□□□□ -1.24
IFT88-201ENST00000319980 PEX19P40855 299 aa7.31□□□□□ -1.24
IFT88-201ENST00000319980 TXNL4AP83876 142 aaKnown RBP7.31□□□□□ -1.24
IFT88-201ENST00000319980 TAP2Q03519 686 aa7.31□□□□□ -1.24
IFT88-201ENST00000319980 CHRNB3Q05901 458 aa7.31□□□□□ -1.24
IFT88-201ENST00000319980 ATP6AP1Q15904 470 aa7.31□□□□□ -1.24
IFT88-201ENST00000319980 UGT8Q16880 541 aa7.31□□□□□ -1.24
IFT88-201ENST00000319980 LIN52Q52LA3 116 aa7.31□□□□□ -1.24
IFT88-201ENST00000319980 FAM98BQ52LJ0 330 aaKnown RBP7.31□□□□□ -1.24
IFT88-201ENST00000319980 OTUD3Q5T2D3 398 aaPredicted RBP7.31□□□□□ -1.24
IFT88-201ENST00000319980 LRIF1Q5T3J3 769 aa7.31□□□□□ -1.24
IFT88-201ENST00000319980 FAM46CQ5VWP2 391 aa7.31□□□□□ -1.24
IFT88-201ENST00000319980 TMEM214Q6NUQ4 689 aaKnown RBP7.31□□□□□ -1.24
IFT88-201ENST00000319980 SYCE2Q6PIF2 218 aa7.31□□□□□ -1.24
IFT88-201ENST00000319980 PARM1Q6UWI2 310 aa7.31□□□□□ -1.24
IFT88-201ENST00000319980 ENPP6Q6UWR7 440 aa7.31□□□□□ -1.24
IFT88-201ENST00000319980 XKR5Q6UX68 686 aa7.31□□□□□ -1.24
IFT88-201ENST00000319980 FAM83HQ6ZRV2 1179 aaPredicted RBP7.31□□□□□ -1.24
IFT88-201ENST00000319980 C11orf96Q7Z7L8 435 aa7.31□□□□□ -1.24
IFT88-201ENST00000319980 TNIP2Q8NFZ5 429 aa7.31□□□□□ -1.24
IFT88-201ENST00000319980 OR9A1PQ8NGU1 263 aa7.31□□□□□ -1.24
IFT88-201ENST00000319980 DNAJB8Q8NHS0 232 aa7.31□□□□□ -1.24
IFT88-201ENST00000319980 TFAP2CQ92754 450 aa7.31□□□□□ -1.24
IFT88-201ENST00000319980 FGF14Q92915 247 aa7.31□□□□□ -1.24
IFT88-201ENST00000319980 FAM162AQ96A26 154 aa7.31□□□□□ -1.24
IFT88-201ENST00000319980 SPACA7Q96KW9 195 aa7.31□□□□□ -1.24
IFT88-201ENST00000319980 IL17FQ96PD4 163 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms