RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 SLC5A11Q8WWX8 675 aa14.84□□□□□ -0.03
PDLIM5-202ENST00000318007 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.84□□□□□ -0.03
PDLIM5-202ENST00000318007 NPHS2Q9NP85 383 aa14.84□□□□□ -0.03
PDLIM5-202ENST00000318007 MRPS30Q9NP92 439 aaKnown RBP14.84□□□□□ -0.03
PDLIM5-202ENST00000318007 EVA1BQ9NVM1 165 aa14.84□□□□□ -0.03
PDLIM5-202ENST00000318007 BTRCQ9Y297 605 aa14.84□□□□□ -0.03
PDLIM5-202ENST00000318007 PCDHB11Q9Y5F2 797 aa14.84□□□□□ -0.03
PDLIM5-202ENST00000318007 PCM1Q15154 2024 aa14.84□□□□□ -0.03
PDLIM5-202ENST00000318007 IGHV1OR21-1A0A087WYE8 117 aa14.84□□□□□ -0.03
PDLIM5-202ENST00000318007 IGKV1-8A0A0C4DH67 115 aa14.84□□□□□ -0.03
PDLIM5-202ENST00000318007 CAPN5O15484 640 aaPredicted RBP14.84□□□□□ -0.03
PDLIM5-202ENST00000318007 B4GAT1O43505 415 aa14.84□□□□□ -0.03
PDLIM5-202ENST00000318007 H2AFYO75367 372 aaKnown RBP14.84□□□□□ -0.03
PDLIM5-202ENST00000318007 JUNP05412 331 aaKnown RBP14.84□□□□□ -0.03
PDLIM5-202ENST00000318007 CAPN1P07384 714 aa14.84□□□□□ -0.03
PDLIM5-202ENST00000318007 GNAZP19086 355 aa14.84□□□□□ -0.03
PDLIM5-202ENST00000318007 CAPZBP47756 277 aa14.84□□□□□ -0.03
PDLIM5-202ENST00000318007 LSSP48449 732 aa14.84□□□□□ -0.03
PDLIM5-202ENST00000318007 DOC2AQ14183 400 aa14.84□□□□□ -0.03
PDLIM5-202ENST00000318007 RNF31Q96EP0 1072 aa14.84□□□□□ -0.03
PDLIM5-202ENST00000318007 OR2A14Q96R47 310 aa14.84□□□□□ -0.03
PDLIM5-202ENST00000318007 PLCD4Q9BRC7 762 aa14.84□□□□□ -0.03
PDLIM5-202ENST00000318007 NUDT22Q9BRQ3 303 aa14.84□□□□□ -0.03
PDLIM5-202ENST00000318007 C1QTNF3Q9BXJ4 246 aa14.84□□□□□ -0.03
PDLIM5-202ENST00000318007 SLC6A20Q9NP91 592 aa14.84□□□□□ -0.03
PDLIM5-202ENST00000318007 FARSBQ9NSD9 589 aaKnown RBP14.84□□□□□ -0.03
PDLIM5-202ENST00000318007 DCTN4Q9UJW0 460 aa14.84□□□□□ -0.03
PDLIM5-202ENST00000318007 C2orf74A8MZ97 194 aa14.83□□□□□ -0.04
PDLIM5-202ENST00000318007 TMEM114B3SHH9 223 aa14.83□□□□□ -0.04
PDLIM5-202ENST00000318007 FLRT2O43155 660 aa14.83□□□□□ -0.04
PDLIM5-202ENST00000318007 MLYCDO95822 493 aa14.83□□□□□ -0.04
PDLIM5-202ENST00000318007 OTCP00480 354 aa14.83□□□□□ -0.04
PDLIM5-202ENST00000318007 RPLP0P05388 317 aaKnown RBP14.83□□□□□ -0.04
PDLIM5-202ENST00000318007 CSF2RBP32927 897 aa14.83□□□□□ -0.04
PDLIM5-202ENST00000318007 HSD17B2P37059 387 aa14.83□□□□□ -0.04
PDLIM5-202ENST00000318007 NEK2P51955 445 aa14.83□□□□□ -0.04
PDLIM5-202ENST00000318007 CYP4F3Q08477 520 aa14.83□□□□□ -0.04
PDLIM5-202ENST00000318007 SLBPQ14493 270 aaKnown RBP eCLIP14.83□□□□□ -0.04
PDLIM5-202ENST00000318007 PROX2Q3B8N5 592 aa14.83□□□□□ -0.04
PDLIM5-202ENST00000318007 VWA5B1Q5TIE3 1220 aa14.83□□□□□ -0.04
PDLIM5-202ENST00000318007 SPRED1Q7Z699 444 aa14.83□□□□□ -0.04
PDLIM5-202ENST00000318007 FAM129CQ86XR2 697 aa14.83□□□□□ -0.04
PDLIM5-202ENST00000318007 CRLF3Q8IUI8 442 aa14.83□□□□□ -0.04
PDLIM5-202ENST00000318007 RBM12BQ8IXT5 1001 aaKnown RBP14.83□□□□□ -0.04
PDLIM5-202ENST00000318007 KIAA2013Q8IYS2 634 aa14.83□□□□□ -0.04
PDLIM5-202ENST00000318007 CHMP6Q96FZ7 201 aa14.83□□□□□ -0.04
PDLIM5-202ENST00000318007 DPH7Q9BTV6 452 aa14.83□□□□□ -0.04
PDLIM5-202ENST00000318007 ILKAPQ9H0C8 392 aaPredicted RBP14.83□□□□□ -0.04
PDLIM5-202ENST00000318007 EML4Q9HC35 981 aaKnown RBP14.83□□□□□ -0.04
PDLIM5-202ENST00000318007 FTSJ1Q9UET6 329 aa14.83□□□□□ -0.04
PDLIM5-202ENST00000318007 EME2A4GXA9 379 aaPredicted RBP14.82□□□□□ -0.04
PDLIM5-202ENST00000318007 KLF11O14901 512 aa14.82□□□□□ -0.04
PDLIM5-202ENST00000318007 CLDN9O95484 217 aa14.82□□□□□ -0.04
PDLIM5-202ENST00000318007 LDOC1O95751 146 aaPredicted RBP14.82□□□□□ -0.04
PDLIM5-202ENST00000318007 ATXN8OSP0DMR3 200 aa14.82□□□□□ -0.04
PDLIM5-202ENST00000318007 PCNAP12004 261 aa14.82□□□□□ -0.04
PDLIM5-202ENST00000318007 CDH3P22223 829 aa14.82□□□□□ -0.04
PDLIM5-202ENST00000318007 CCND1P24385 295 aa14.82□□□□□ -0.04
PDLIM5-202ENST00000318007 SEPHS1P49903 392 aa14.82□□□□□ -0.04
PDLIM5-202ENST00000318007 CLDN6P56747 220 aa14.82□□□□□ -0.04
PDLIM5-202ENST00000318007 CYP4F2P78329 520 aa14.82□□□□□ -0.04
PDLIM5-202ENST00000318007 SPESP1Q6UW49 350 aa14.82□□□□□ -0.04
PDLIM5-202ENST00000318007 LCTLQ6UWM7 567 aa14.82□□□□□ -0.04
PDLIM5-202ENST00000318007 TMPRSS9Q7Z410 1059 aa14.82□□□□□ -0.04
PDLIM5-202ENST00000318007 RAB3IL1Q8TBN0 382 aa14.82□□□□□ -0.04
PDLIM5-202ENST00000318007 METTL6Q8TCB7 284 aa14.82□□□□□ -0.04
PDLIM5-202ENST00000318007 ZNF317Q96PQ6 595 aaPredicted RBP14.82□□□□□ -0.04
PDLIM5-202ENST00000318007 MAP3K3Q99759 626 aa14.82□□□□□ -0.04
PDLIM5-202ENST00000318007 ABCG4Q9H172 646 aa14.82□□□□□ -0.04
PDLIM5-202ENST00000318007 CELSR3Q9NYQ7 3312 aa14.82□□□□□ -0.04
PDLIM5-202ENST00000318007 UNC13CQ8NB66 2214 aa14.82□□□□□ -0.04
PDLIM5-202ENST00000318007 ATP6AP2A0A1C7CYW4 349 aa14.82□□□□□ -0.04
PDLIM5-202ENST00000318007 LILRA5A6NI73 299 aa14.82□□□□□ -0.04
PDLIM5-202ENST00000318007 DUX1O43812 170 aa14.82□□□□□ -0.04
PDLIM5-202ENST00000318007 EDF1O60869 148 aaKnown RBP14.82□□□□□ -0.04
PDLIM5-202ENST00000318007 ATP6AP2O75787 350 aa14.82□□□□□ -0.04
PDLIM5-202ENST00000318007 ESRRBO95718 433 aa14.82□□□□□ -0.04
PDLIM5-202ENST00000318007 HTR6P50406 440 aa14.82□□□□□ -0.04
PDLIM5-202ENST00000318007 CCL7P80098 99 aa14.82□□□□□ -0.04
PDLIM5-202ENST00000318007 CFHR1Q03591 330 aa14.82□□□□□ -0.04
PDLIM5-202ENST00000318007 PRDX1Q06830 199 aaKnown RBP14.82□□□□□ -0.04
PDLIM5-202ENST00000318007 RBBP5Q15291 538 aaKnown RBP14.82□□□□□ -0.04
PDLIM5-202ENST00000318007 DEFB110Q30KQ9 67 aa14.82□□□□□ -0.04
PDLIM5-202ENST00000318007 STPG1Q5TH74 334 aa14.82□□□□□ -0.04
PDLIM5-202ENST00000318007 AVL9Q8NBF6 648 aa14.82□□□□□ -0.04
PDLIM5-202ENST00000318007 RCBTB1Q8NDN9 531 aa14.82□□□□□ -0.04
PDLIM5-202ENST00000318007 FLVCR1-AS1Q8TAF5 88 aa14.82□□□□□ -0.04
PDLIM5-202ENST00000318007 HMGCLL1Q8TB92 370 aa14.82□□□□□ -0.04
PDLIM5-202ENST00000318007 ZFPM2Q8WW38 1151 aa14.82□□□□□ -0.04
PDLIM5-202ENST00000318007 ZNF382Q96SR6 550 aa14.82□□□□□ -0.04
PDLIM5-202ENST00000318007 MTERF1Q99551 399 aaKnown RBP14.82□□□□□ -0.04
PDLIM5-202ENST00000318007 MACROD1Q9BQ69 325 aa14.82□□□□□ -0.04
PDLIM5-202ENST00000318007 HAUS8Q9BT25 410 aa14.82□□□□□ -0.04
PDLIM5-202ENST00000318007 NUF2Q9BZD4 464 aa14.82□□□□□ -0.04
PDLIM5-202ENST00000318007 RAP2CQ9Y3L5 183 aa14.82□□□□□ -0.04
PDLIM5-202ENST00000318007 A0A1W2PQM1 296 aa14.81□□□□□ -0.04
PDLIM5-202ENST00000318007 HGSO14964 777 aaPredicted RBP14.81□□□□□ -0.04
PDLIM5-202ENST00000318007 PRICKLE3O43900 615 aaPredicted RBP14.81□□□□□ -0.04
PDLIM5-202ENST00000318007 SERPIND1P05546 499 aa14.81□□□□□ -0.04
PDLIM5-202ENST00000318007 ZNF883P0CG24 379 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms