RNA–Protein interactions for RNA: ENST00000317610.11

RTN4-201, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,333 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-201ENST00000317610 CTRCQ99895 268 aa18.55■□□□□ 0.56
RTN4-201ENST00000317610 NXF2Q9GZY0 626 aaKnown RBP18.55■□□□□ 0.56
RTN4-201ENST00000317610 REEP1Q9H902 201 aa18.55■□□□□ 0.56
RTN4-201ENST00000317610 RASSF1Q9NS23 344 aa18.55■□□□□ 0.56
RTN4-201ENST00000317610 THUMPD1Q9NXG2 353 aaKnown RBP18.55■□□□□ 0.56
RTN4-201ENST00000317610 PNMA8BQ9ULN7 279 aaPredicted RBP18.55■□□□□ 0.56
RTN4-201ENST00000317610 ERVK-11Q9UQG0 969 aa18.55■□□□□ 0.56
RTN4-201ENST00000317610 SERTM1A2A2V5 107 aa18.54■□□□□ 0.56
RTN4-201ENST00000317610 AGAP5A6NIR3 686 aa18.54■□□□□ 0.56
RTN4-201ENST00000317610 ZBBXA8MT70 800 aa18.54■□□□□ 0.56
RTN4-201ENST00000317610 COCHO43405 550 aa18.54■□□□□ 0.56
RTN4-201ENST00000317610 C1QCP02747 245 aa18.54■□□□□ 0.56
RTN4-201ENST00000317610 CBSLP0DN79 551 aa18.54■□□□□ 0.56
RTN4-201ENST00000317610 CBSP35520 551 aa18.54■□□□□ 0.56
RTN4-201ENST00000317610 KIR3DL1P43629 444 aa18.54■□□□□ 0.56
RTN4-201ENST00000317610 TPTEP56180 551 aa18.54■□□□□ 0.56
RTN4-201ENST00000317610 TAF1CQ15572 869 aaPredicted RBP18.54■□□□□ 0.56
RTN4-201ENST00000317610 TBCEQ15813 527 aaPredicted RBP18.54■□□□□ 0.56
RTN4-201ENST00000317610 MLIPQ5VWP3 458 aa18.54■□□□□ 0.56
RTN4-201ENST00000317610 DNASE1L2Q92874 299 aa18.54■□□□□ 0.56
RTN4-201ENST00000317610 FCRL1Q96LA6 429 aa18.54■□□□□ 0.56
RTN4-201ENST00000317610 SLX1AQ9BQ83 275 aa18.54■□□□□ 0.56
RTN4-201ENST00000317610 ZFYVE1Q9HBF4 777 aa18.54■□□□□ 0.56
RTN4-201ENST00000317610 TSC22D4Q9Y3Q8 395 aa18.54■□□□□ 0.56
RTN4-201ENST00000317610 M0R082 166 aa18.54■□□□□ 0.56
RTN4-201ENST00000317610 C9P02748 559 aa18.54■□□□□ 0.56
RTN4-201ENST00000317610 ENGP17813 658 aa18.54■□□□□ 0.56
RTN4-201ENST00000317610 AP1S1P61966 158 aa18.54■□□□□ 0.56
RTN4-201ENST00000317610 CAMK2GQ13555 558 aaPredicted RBP18.54■□□□□ 0.56
RTN4-201ENST00000317610 CDKN3Q16667 212 aa18.54■□□□□ 0.56
RTN4-201ENST00000317610 ZNF362Q5T0B9 420 aaPredicted RBP18.54■□□□□ 0.56
RTN4-201ENST00000317610 ATXN7L2Q5T6C5 722 aaPredicted RBP18.54■□□□□ 0.56
RTN4-201ENST00000317610 APIPQ96GX9 242 aa18.54■□□□□ 0.56
RTN4-201ENST00000317610 EPYCQ99645 322 aa18.54■□□□□ 0.56
RTN4-201ENST00000317610 ELOVL6Q9H5J4 265 aa18.54■□□□□ 0.56
RTN4-201ENST00000317610 PLCXD1Q9NUJ7 323 aa18.54■□□□□ 0.56
RTN4-201ENST00000317610 TRMT13Q9NUP7 481 aaKnown RBP18.54■□□□□ 0.56
RTN4-201ENST00000317610 FCF1Q9Y324 198 aaKnown RBP18.54■□□□□ 0.56
RTN4-201ENST00000317610 PCDHGA6Q9Y5G7 932 aa18.54■□□□□ 0.56
RTN4-201ENST00000317610 ZNF840PA6NDX5 716 aa18.53■□□□□ 0.56
RTN4-201ENST00000317610 AIREO43918 545 aa18.53■□□□□ 0.56
RTN4-201ENST00000317610 SCN2BO60939 215 aa18.53■□□□□ 0.56
RTN4-201ENST00000317610 OXSR1O95747 527 aaPredicted RBP18.53■□□□□ 0.56
RTN4-201ENST00000317610 AMD1P17707 334 aa18.53■□□□□ 0.56
RTN4-201ENST00000317610 CLK1P49759 484 aaKnown RBP18.53■□□□□ 0.56
RTN4-201ENST00000317610 SLC13A2Q13183 592 aa18.53■□□□□ 0.56
RTN4-201ENST00000317610 HECTD3Q5T447 861 aa18.53■□□□□ 0.56
RTN4-201ENST00000317610 RASAL3Q86YV0 1011 aa18.53■□□□□ 0.56
RTN4-201ENST00000317610 L3MBTL4Q8NA19 623 aa18.53■□□□□ 0.56
RTN4-201ENST00000317610 OVCA2Q8WZ82 227 aa18.53■□□□□ 0.56
RTN4-201ENST00000317610 EGLN2Q96KS0 407 aa18.53■□□□□ 0.56
RTN4-201ENST00000317610 ZBTB20Q9HC78 741 aaPredicted RBP18.53■□□□□ 0.56
RTN4-201ENST00000317610 ABCB10Q9NRK6 738 aa18.53■□□□□ 0.56
RTN4-201ENST00000317610 KCTD5Q9NXV2 234 aa18.53■□□□□ 0.56
RTN4-201ENST00000317610 KLHL42Q9P2K6 505 aa18.53■□□□□ 0.56
RTN4-201ENST00000317610 PSORS1C1Q9UIG5 152 aa18.53■□□□□ 0.56
RTN4-201ENST00000317610 LRATO95237 230 aa18.52■□□□□ 0.56
RTN4-201ENST00000317610 MZF1P28698 734 aaPredicted RBP18.52■□□□□ 0.56
RTN4-201ENST00000317610 GSSP48637 474 aa18.52■□□□□ 0.56
RTN4-201ENST00000317610 PXNP49023 591 aaPredicted RBP18.52■□□□□ 0.56
RTN4-201ENST00000317610 NEK2P51955 445 aa18.52■□□□□ 0.56
RTN4-201ENST00000317610 WNT3P56703 355 aa18.52■□□□□ 0.56
RTN4-201ENST00000317610 ELP6Q0PNE2 266 aa18.52■□□□□ 0.56
RTN4-201ENST00000317610 VEZF1Q14119 521 aa18.52■□□□□ 0.56
RTN4-201ENST00000317610 ZXDCQ2QGD7 858 aaPredicted RBP18.52■□□□□ 0.56
RTN4-201ENST00000317610 GPR33Q49SQ1 333 aa18.52■□□□□ 0.56
RTN4-201ENST00000317610 PRSS36Q5K4E3 855 aa18.52■□□□□ 0.56
RTN4-201ENST00000317610 GALNT10Q86SR1 603 aa18.52■□□□□ 0.56
RTN4-201ENST00000317610 REXO4Q9GZR2 422 aaKnown RBP18.52■□□□□ 0.56
RTN4-201ENST00000317610 FKBP14Q9NWM8 211 aa18.52■□□□□ 0.56
RTN4-201ENST00000317610 MARCH5Q9NX47 278 aa18.52■□□□□ 0.56
RTN4-201ENST00000317610 CRLS1Q9UJA2 301 aa18.52■□□□□ 0.56
RTN4-201ENST00000317610 RNF6Q9Y252 685 aa18.52■□□□□ 0.56
RTN4-201ENST00000317610 GLYATL1P3A0A0U1RQE8 302 aa18.52■□□□□ 0.56
RTN4-201ENST00000317610 GLTPD2A6NH11 291 aa18.52■□□□□ 0.56
RTN4-201ENST00000317610 FPGTO14772 594 aa18.52■□□□□ 0.56
RTN4-201ENST00000317610 EPN2O95208 641 aa18.52■□□□□ 0.56
RTN4-201ENST00000317610 TRBC1P01850 177 aa18.52■□□□□ 0.56
RTN4-201ENST00000317610 BPIP17213 487 aa18.52■□□□□ 0.56
RTN4-201ENST00000317610 PRPS1L1P21108 318 aa18.52■□□□□ 0.56
RTN4-201ENST00000317610 RPIAP49247 311 aa18.52■□□□□ 0.56
RTN4-201ENST00000317610 CHRNA6Q15825 494 aa18.52■□□□□ 0.56
RTN4-201ENST00000317610 KCNA10Q16322 511 aa18.52■□□□□ 0.56
RTN4-201ENST00000317610 USP43Q70EL4 1123 aa18.52■□□□□ 0.56
RTN4-201ENST00000317610 C7orf34Q96L11 122 aa18.52■□□□□ 0.56
RTN4-201ENST00000317610 COPS4Q9BT78 406 aa18.52■□□□□ 0.56
RTN4-201ENST00000317610 GKN1Q9NS71 199 aa18.52■□□□□ 0.56
RTN4-201ENST00000317610 ARL15Q9NXU5 204 aa18.52■□□□□ 0.56
RTN4-201ENST00000317610 OR51B4Q9Y5P0 310 aa18.52■□□□□ 0.56
RTN4-201ENST00000317610 MN1Q10571 1320 aaPredicted RBP18.52■□□□□ 0.55
RTN4-201ENST00000317610 PRMT3O60678 531 aa18.51■□□□□ 0.55
RTN4-201ENST00000317610 PARNO95453 639 aaKnown RBP18.51■□□□□ 0.55
RTN4-201ENST00000317610 CTSKP43235 329 aa18.51■□□□□ 0.55
RTN4-201ENST00000317610 SRSF11Q05519 484 aaKnown RBP18.51■□□□□ 0.55
RTN4-201ENST00000317610 SYT16Q17RD7 645 aa18.51■□□□□ 0.55
RTN4-201ENST00000317610 COLEC12Q5KU26 742 aa18.51■□□□□ 0.55
RTN4-201ENST00000317610 STEAP3Q658P3 488 aa18.51■□□□□ 0.55
RTN4-201ENST00000317610 NOXRED1Q6NXP6 359 aa18.51■□□□□ 0.55
RTN4-201ENST00000317610 NEK5Q6P3R8 708 aa18.51■□□□□ 0.55
RTN4-201ENST00000317610 ADGRG2Q8IZP9 1017 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms