RNA–Protein interactions for RNA: ENST00000316097.12

SCAMP4-201, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP4, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-201ENST00000316097 LRIT3Q3SXY7 679 aa16.72■□□□□ 0.27
SCAMP4-201ENST00000316097 SYT6Q5T7P8 510 aaPredicted RBP16.72■□□□□ 0.27
SCAMP4-201ENST00000316097 LETMD1Q6P1Q0 360 aa16.72■□□□□ 0.27
SCAMP4-201ENST00000316097 ZNF783Q6ZMS7 281 aa16.72■□□□□ 0.27
SCAMP4-201ENST00000316097 DET1Q7L5Y6 550 aa16.72■□□□□ 0.27
SCAMP4-201ENST00000316097 RIBC2Q9H4K1 309 aa16.72■□□□□ 0.27
SCAMP4-201ENST00000316097 TPRKBQ9Y3C4 175 aa16.72■□□□□ 0.27
SCAMP4-201ENST00000316097 DENND4CQ5VZ89 1909 aa16.71■□□□□ 0.27
SCAMP4-201ENST00000316097 A6NL46 340 aa16.71■□□□□ 0.27
SCAMP4-201ENST00000316097 M0QX08 132 aa16.71■□□□□ 0.27
SCAMP4-201ENST00000316097 RFXAPO00287 272 aa16.71■□□□□ 0.27
SCAMP4-201ENST00000316097 ASNA1O43681 348 aa16.71■□□□□ 0.27
SCAMP4-201ENST00000316097 KCNK2O95069 426 aa16.71■□□□□ 0.27
SCAMP4-201ENST00000316097 EPHA5P54756 1037 aa16.71■□□□□ 0.27
SCAMP4-201ENST00000316097 IL18R1Q13478 541 aa16.71■□□□□ 0.27
SCAMP4-201ENST00000316097 COLEC12Q5KU26 742 aa16.71■□□□□ 0.27
SCAMP4-201ENST00000316097 LY6G5CQ5SRR4 150 aa16.71■□□□□ 0.27
SCAMP4-201ENST00000316097 NEK10Q6ZWH5 1172 aa16.71■□□□□ 0.27
SCAMP4-201ENST00000316097 METTL6Q8TCB7 284 aa16.71■□□□□ 0.27
SCAMP4-201ENST00000316097 FBLIM1Q8WUP2 373 aa16.71■□□□□ 0.27
SCAMP4-201ENST00000316097 SORCS1Q8WY21 1168 aa16.71■□□□□ 0.27
SCAMP4-201ENST00000316097 ZHX1-C8orf76Q96EF9 292 aa16.71■□□□□ 0.27
SCAMP4-201ENST00000316097 CD274Q9NZQ7 290 aa16.71■□□□□ 0.27
SCAMP4-201ENST00000316097 CAPN1P07384 714 aa16.71■□□□□ 0.26
SCAMP4-201ENST00000316097 OGNP20774 298 aaKnown RBP16.71■□□□□ 0.26
SCAMP4-201ENST00000316097 IGFBP5P24593 272 aa16.71■□□□□ 0.26
SCAMP4-201ENST00000316097 HK3P52790 923 aa16.71■□□□□ 0.26
SCAMP4-201ENST00000316097 PON2Q15165 354 aa16.71■□□□□ 0.26
SCAMP4-201ENST00000316097 PRSS36Q5K4E3 855 aa16.71■□□□□ 0.26
SCAMP4-201ENST00000316097 RETSATQ6NUM9 610 aa16.71■□□□□ 0.26
SCAMP4-201ENST00000316097 ZNF540Q8NDQ6 660 aa16.71■□□□□ 0.26
SCAMP4-201ENST00000316097 SLC13A3Q8WWT9 602 aa16.71■□□□□ 0.26
SCAMP4-201ENST00000316097 C1QTNF3Q9BXJ4 246 aa16.71■□□□□ 0.26
SCAMP4-201ENST00000316097 MIR1-1HGQ9H1L0 117 aa16.71■□□□□ 0.26
SCAMP4-201ENST00000316097 MTIF3Q9H2K0 278 aaKnown RBP16.71■□□□□ 0.26
SCAMP4-201ENST00000316097 DUSP21Q9H596 190 aa16.71■□□□□ 0.26
SCAMP4-201ENST00000316097 SCN3BQ9NY72 215 aa16.71■□□□□ 0.26
SCAMP4-201ENST00000316097 FKBPLQ9UIM3 349 aa16.71■□□□□ 0.26
SCAMP4-201ENST00000316097 E2F3O00716 465 aa16.7■□□□□ 0.26
SCAMP4-201ENST00000316097 ANKRD28O15084 1053 aa16.7■□□□□ 0.26
SCAMP4-201ENST00000316097 VIPR2P41587 438 aa16.7■□□□□ 0.26
SCAMP4-201ENST00000316097 NRIP1P48552 1158 aa16.7■□□□□ 0.26
SCAMP4-201ENST00000316097 ZNF140P52738 457 aaPredicted RBP16.7■□□□□ 0.26
SCAMP4-201ENST00000316097 SMN1Q16637 294 aaKnown RBP16.7■□□□□ 0.26
SCAMP4-201ENST00000316097 AP5B1Q2VPB7 878 aa16.7■□□□□ 0.26
SCAMP4-201ENST00000316097 RFTN2Q52LD8 501 aaPredicted RBP16.7■□□□□ 0.26
SCAMP4-201ENST00000316097 STEAP3Q658P3 488 aa16.7■□□□□ 0.26
SCAMP4-201ENST00000316097 FKBP9P1Q75LS8 142 aa16.7■□□□□ 0.26
SCAMP4-201ENST00000316097 UTS2BQ765I0 119 aa16.7■□□□□ 0.26
SCAMP4-201ENST00000316097 LACC1Q8IV20 430 aa16.7■□□□□ 0.26
SCAMP4-201ENST00000316097 SVOPQ8N4V2 548 aa16.7■□□□□ 0.26
SCAMP4-201ENST00000316097 KAT8Q9H7Z6 458 aaKnown RBP16.7■□□□□ 0.26
SCAMP4-201ENST00000316097 MYO9BQ13459 2157 aa16.7■□□□□ 0.26
SCAMP4-201ENST00000316097 TYRP14679 529 aa16.7■□□□□ 0.26
SCAMP4-201ENST00000316097 MSH3P20585 1137 aa16.7■□□□□ 0.26
SCAMP4-201ENST00000316097 RFX4Q33E94 735 aa16.7■□□□□ 0.26
SCAMP4-201ENST00000316097 ARHGAP15Q53QZ3 475 aa16.7■□□□□ 0.26
SCAMP4-201ENST00000316097 LRRC73Q5JTD7 316 aa16.7■□□□□ 0.26
SCAMP4-201ENST00000316097 PIANPQ8IYJ0 282 aa16.7■□□□□ 0.26
SCAMP4-201ENST00000316097 PHACTR4Q8IZ21 702 aa16.7■□□□□ 0.26
SCAMP4-201ENST00000316097 ADGRG2Q8IZP9 1017 aa16.7■□□□□ 0.26
SCAMP4-201ENST00000316097 SETD9Q8NE22 299 aa16.7■□□□□ 0.26
SCAMP4-201ENST00000316097 ZNF486Q96H40 463 aaPredicted RBP16.7■□□□□ 0.26
SCAMP4-201ENST00000316097 ADGRE3Q9BY15 652 aa16.7■□□□□ 0.26
SCAMP4-201ENST00000316097 TP63Q9H3D4 680 aaPredicted RBP16.7■□□□□ 0.26
SCAMP4-201ENST00000316097 TMEM45AQ9NWC5 275 aa16.7■□□□□ 0.26
SCAMP4-201ENST00000316097 OSGIN1Q9UJX0 560 aa16.7■□□□□ 0.26
SCAMP4-201ENST00000316097 MRPS23Q9Y3D9 190 aaKnown RBP16.7■□□□□ 0.26
SCAMP4-201ENST00000316097 EFCAB9A8MZ26 197 aa16.69■□□□□ 0.26
SCAMP4-201ENST00000316097 TRIM16O95361 564 aa16.69■□□□□ 0.26
SCAMP4-201ENST00000316097 ITGAMP11215 1152 aa16.69■□□□□ 0.26
SCAMP4-201ENST00000316097 SPNP16150 400 aa16.69■□□□□ 0.26
SCAMP4-201ENST00000316097 CD36P16671 472 aa16.69■□□□□ 0.26
SCAMP4-201ENST00000316097 UBE3AQ05086 875 aa16.69■□□□□ 0.26
SCAMP4-201ENST00000316097 PTGR1Q14914 329 aa16.69■□□□□ 0.26
SCAMP4-201ENST00000316097 TYSND1Q2T9J0 566 aa16.69■□□□□ 0.26
SCAMP4-201ENST00000316097 PSAPL1Q6NUJ1 521 aa16.69■□□□□ 0.26
SCAMP4-201ENST00000316097 PRSS48Q7RTY5 328 aa16.69■□□□□ 0.26
SCAMP4-201ENST00000316097 ZSWIM9Q86XI8 627 aa16.69■□□□□ 0.26
SCAMP4-201ENST00000316097 HIPK1Q86Z02 1210 aa16.69■□□□□ 0.26
SCAMP4-201ENST00000316097 MMAAQ8IVH4 418 aaKnown RBP16.69■□□□□ 0.26
SCAMP4-201ENST00000316097 IRF7Q92985 503 aa16.69■□□□□ 0.26
SCAMP4-201ENST00000316097 ZFYVE19Q96K21 471 aa16.69■□□□□ 0.26
SCAMP4-201ENST00000316097 BARD1Q99728 777 aaKnown RBP16.69■□□□□ 0.26
SCAMP4-201ENST00000316097 IGFLR1Q9H665 355 aa16.69■□□□□ 0.26
SCAMP4-201ENST00000316097 ACOT13Q9NPJ3 140 aa16.69■□□□□ 0.26
SCAMP4-201ENST00000316097 NLE1Q9NVX2 485 aaPredicted RBP16.69■□□□□ 0.26
SCAMP4-201ENST00000316097 VNN3Q9NY84 501 aa16.69■□□□□ 0.26
SCAMP4-201ENST00000316097 PKP3Q9Y446 797 aa16.69■□□□□ 0.26
SCAMP4-201ENST00000316097 TESMINQ9Y4I5 508 aa16.69■□□□□ 0.26
SCAMP4-201ENST00000316097 ARIH1Q9Y4X5 557 aaPredicted RBP16.69■□□□□ 0.26
SCAMP4-201ENST00000316097 ISPDA4D126 451 aa16.69■□□□□ 0.26
SCAMP4-201ENST00000316097 C2orf81A6NN90 581 aa16.69■□□□□ 0.26
SCAMP4-201ENST00000316097 KLK8O60259 260 aa16.69■□□□□ 0.26
SCAMP4-201ENST00000316097 OR1I1O60431 355 aa16.69■□□□□ 0.26
SCAMP4-201ENST00000316097 SCELO95171 688 aa16.69■□□□□ 0.26
SCAMP4-201ENST00000316097 SERPINA1P01009 418 aa16.69■□□□□ 0.26
SCAMP4-201ENST00000316097 SRCP12931 536 aa16.69■□□□□ 0.26
SCAMP4-201ENST00000316097 PHC1P78364 1004 aa16.69■□□□□ 0.26
SCAMP4-201ENST00000316097 DMPKQ09013 629 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms