RNA–Protein interactions for RNA: ENST00000309422.6

VEGFB-201, Transcript of vascular endothelial growth factor B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFB, Length 1,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-201ENST00000309422 GPSM1Q86YR5 675 aa19.02■□□□□ 0.64
VEGFB-201ENST00000309422 SLC44A1Q8WWI5 657 aa19.02■□□□□ 0.64
VEGFB-201ENST00000309422 FAM117AQ9C073 453 aa19.02■□□□□ 0.64
VEGFB-201ENST00000309422 OR2A25A4D2G3 310 aa19.01■□□□□ 0.63
VEGFB-201ENST00000309422 SYCE1LA8MT33 242 aa19.01■□□□□ 0.63
VEGFB-201ENST00000309422 EFSO43281 561 aa19.01■□□□□ 0.63
VEGFB-201ENST00000309422 CD63P08962 238 aa19.01■□□□□ 0.63
VEGFB-201ENST00000309422 LTA4HP09960 611 aaKnown RBP19.01■□□□□ 0.63
VEGFB-201ENST00000309422 PIM1P11309 404 aaPredicted RBP19.01■□□□□ 0.63
VEGFB-201ENST00000309422 TNFRSF8P28908 595 aa19.01■□□□□ 0.63
VEGFB-201ENST00000309422 VSX2P58304 361 aaPredicted RBP19.01■□□□□ 0.63
VEGFB-201ENST00000309422 DNASE1L3Q13609 305 aa19.01■□□□□ 0.63
VEGFB-201ENST00000309422 TMEM207Q6UWW9 146 aa19.01■□□□□ 0.63
VEGFB-201ENST00000309422 UHMK1Q8TAS1 419 aaKnown RBP19.01■□□□□ 0.63
VEGFB-201ENST00000309422 STAG3L4Q8TBR4 150 aa19.01■□□□□ 0.63
VEGFB-201ENST00000309422 ANKRD49Q8WVL7 239 aa19.01■□□□□ 0.63
VEGFB-201ENST00000309422 STARD8Q92502 1023 aa19.01■□□□□ 0.63
VEGFB-201ENST00000309422 EXT2Q93063 718 aa19.01■□□□□ 0.63
VEGFB-201ENST00000309422 GPR87Q9BY21 358 aa19.01■□□□□ 0.63
VEGFB-201ENST00000309422 PRM3Q9NNZ6 103 aa19.01■□□□□ 0.63
VEGFB-201ENST00000309422 SLC6A20Q9NP91 592 aa19.01■□□□□ 0.63
VEGFB-201ENST00000309422 SNX15Q9NRS6 342 aa19.01■□□□□ 0.63
VEGFB-201ENST00000309422 TMEM184CQ9NVA4 438 aa19.01■□□□□ 0.63
VEGFB-201ENST00000309422 CD274Q9NZQ7 290 aa19.01■□□□□ 0.63
VEGFB-201ENST00000309422 PCDHGA4Q9Y5G9 962 aa19.01■□□□□ 0.63
VEGFB-201ENST00000309422 CCDC189A1A4V9 331 aa19■□□□□ 0.63
VEGFB-201ENST00000309422 NCF1BA6NI72 391 aaPredicted RBP19■□□□□ 0.63
VEGFB-201ENST00000309422 NCF1CA8MVU1 366 aaPredicted RBP19■□□□□ 0.63
VEGFB-201ENST00000309422 RIPK2O43353 540 aa19■□□□□ 0.63
VEGFB-201ENST00000309422 NCF1P14598 390 aaPredicted RBP19■□□□□ 0.63
VEGFB-201ENST00000309422 CD1DP15813 335 aa19■□□□□ 0.63
VEGFB-201ENST00000309422 ALAS2P22557 587 aa19■□□□□ 0.63
VEGFB-201ENST00000309422 RPS15AP62244 130 aaKnown RBP19■□□□□ 0.63
VEGFB-201ENST00000309422 RHDQ02161 417 aa19■□□□□ 0.63
VEGFB-201ENST00000309422 TGFBIQ15582 683 aa19■□□□□ 0.63
VEGFB-201ENST00000309422 PPP1R3AQ16821 1122 aa19■□□□□ 0.63
VEGFB-201ENST00000309422 RHBDD2Q6NTF9 364 aa19■□□□□ 0.63
VEGFB-201ENST00000309422 GSPT2Q8IYD1 628 aaKnown RBP19■□□□□ 0.63
VEGFB-201ENST00000309422 DSELQ8IZU8 1212 aa19■□□□□ 0.63
VEGFB-201ENST00000309422 LRRN4CLQ8ND94 238 aa19■□□□□ 0.63
VEGFB-201ENST00000309422 UBLCP1Q8WVY7 318 aaPredicted RBP19■□□□□ 0.63
VEGFB-201ENST00000309422 SLC45A3Q96JT2 553 aa19■□□□□ 0.63
VEGFB-201ENST00000309422 CABS1Q96KC9 395 aa19■□□□□ 0.63
VEGFB-201ENST00000309422 SGPP1Q9BX95 441 aa19■□□□□ 0.63
VEGFB-201ENST00000309422 SPRY4Q9C004 299 aa19■□□□□ 0.63
VEGFB-201ENST00000309422 UNKQ9C0B0 810 aaKnown RBP19■□□□□ 0.63
VEGFB-201ENST00000309422 VPS11Q9H270 941 aa19■□□□□ 0.63
VEGFB-201ENST00000309422 PRORYQ9H606 182 aa19■□□□□ 0.63
VEGFB-201ENST00000309422 ZNF180Q9UJW8 692 aa19■□□□□ 0.63
VEGFB-201ENST00000309422 KCNE2Q9Y6J6 123 aa19■□□□□ 0.63
VEGFB-201ENST00000309422 URB1O60287 2271 aaKnown RBP19■□□□□ 0.63
VEGFB-201ENST00000309422 A0A096LPK6 155 aa18.99■□□□□ 0.63
VEGFB-201ENST00000309422 IQANK1A0A1B0GTG1 560 aa18.99■□□□□ 0.63
VEGFB-201ENST00000309422 LOC101059948A0A1B0GTJ6 334 aa18.99■□□□□ 0.63
VEGFB-201ENST00000309422 PRPF4O43172 522 aaKnown RBP eCLIP18.99■□□□□ 0.637e-7■■■■■ 43.1
VEGFB-201ENST00000309422 SLC35E2BP0CK96 405 aa18.99■□□□□ 0.63
VEGFB-201ENST00000309422 CCR8P51685 355 aa18.99■□□□□ 0.63
VEGFB-201ENST00000309422 GPS2Q13227 327 aa18.99■□□□□ 0.63
VEGFB-201ENST00000309422 MUM1Q2TAK8 710 aa18.99■□□□□ 0.63
VEGFB-201ENST00000309422 CDKL4Q5MAI5 379 aa18.99■□□□□ 0.63
VEGFB-201ENST00000309422 SPNS2Q8IVW8 549 aa18.99■□□□□ 0.63
VEGFB-201ENST00000309422 SPATA6LQ8N4H0 392 aa18.99■□□□□ 0.63
VEGFB-201ENST00000309422 CSNK1A1LQ8N752 337 aa18.99■□□□□ 0.63
VEGFB-201ENST00000309422 OR56A3Q8NH54 315 aa18.99■□□□□ 0.63
VEGFB-201ENST00000309422 CT55Q8WUE5 264 aa18.99■□□□□ 0.63
VEGFB-201ENST00000309422 KIAA1191Q96A73 305 aa18.99■□□□□ 0.63
VEGFB-201ENST00000309422 PYCR2Q96C36 320 aa18.99■□□□□ 0.63
VEGFB-201ENST00000309422 MTBPQ96DY7 904 aa18.99■□□□□ 0.63
VEGFB-201ENST00000309422 CATSPER2Q96P56 530 aa18.99■□□□□ 0.63
VEGFB-201ENST00000309422 CAPS2Q9BXY5 557 aa18.99■□□□□ 0.63
VEGFB-201ENST00000309422 SPRTNQ9H040 489 aaPredicted RBP18.99■□□□□ 0.63
VEGFB-201ENST00000309422 PCMTD2Q9NV79 361 aa18.99■□□□□ 0.63
VEGFB-201ENST00000309422 NUDT4Q9NZJ9 180 aa18.99■□□□□ 0.63
VEGFB-201ENST00000309422 EPG5Q9HCE0 2579 aa18.99■□□□□ 0.63
VEGFB-201ENST00000309422 ANKRD11Q6UB99 2663 aaPredicted RBP18.99■□□□□ 0.63
VEGFB-201ENST00000309422 ADAMTS20P59510 1910 aa18.98■□□□□ 0.63
VEGFB-201ENST00000309422 A0A1B0GX78 115 aa18.98■□□□□ 0.63
VEGFB-201ENST00000309422 SUPT3HB4E1H0 165 aa18.98■□□□□ 0.63
VEGFB-201ENST00000309422 H7BY64 318 aa18.98■□□□□ 0.63
VEGFB-201ENST00000309422 SUPT3HO75486 399 aa18.98■□□□□ 0.63
VEGFB-201ENST00000309422 WDR47O94967 919 aa18.98■□□□□ 0.63
VEGFB-201ENST00000309422 TFEBP19484 476 aa18.98■□□□□ 0.63
VEGFB-201ENST00000309422 DCDP81605 110 aaKnown RBP18.98■□□□□ 0.63
VEGFB-201ENST00000309422 RELAQ04206 551 aa18.98■□□□□ 0.63
VEGFB-201ENST00000309422 NDUFA9Q16795 377 aa18.98■□□□□ 0.63
VEGFB-201ENST00000309422 WASHC2DQ5SRD0 308 aa18.98■□□□□ 0.63
VEGFB-201ENST00000309422 PRAMEF17Q5VTA0 474 aa18.98■□□□□ 0.63
VEGFB-201ENST00000309422 C1orf189Q5VU69 101 aa18.98■□□□□ 0.63
VEGFB-201ENST00000309422 SULT1C3Q6IMI6 304 aa18.98■□□□□ 0.63
VEGFB-201ENST00000309422 TTLL10Q6ZVT0 673 aa18.98■□□□□ 0.63
VEGFB-201ENST00000309422 PAQR7Q86WK9 346 aa18.98■□□□□ 0.63
VEGFB-201ENST00000309422 LRRC56Q8IYG6 542 aaPredicted RBP18.98■□□□□ 0.63
VEGFB-201ENST00000309422 SLC5A11Q8WWX8 675 aa18.98■□□□□ 0.63
VEGFB-201ENST00000309422 THAP11Q96EK4 314 aa18.98■□□□□ 0.63
VEGFB-201ENST00000309422 PRAP1Q96NZ9 151 aa18.98■□□□□ 0.63
VEGFB-201ENST00000309422 ARHGAP9Q9BRR9 750 aa18.98■□□□□ 0.63
VEGFB-201ENST00000309422 DHRS4Q9BTZ2 278 aa18.98■□□□□ 0.63
VEGFB-201ENST00000309422 ALG9Q9H6U8 611 aa18.98■□□□□ 0.63
VEGFB-201ENST00000309422 CUTCQ9NTM9 273 aa18.98■□□□□ 0.63
VEGFB-201ENST00000309422 IFT80Q9P2H3 777 aaPredicted RBP18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms