RNA–Protein interactions for RNA: ENST00000308153.8

H2AFV-202, Transcript of H2A histone family member V, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene H2AFV, Length 752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFV-202ENST00000308153 KIRREL2Q6UWL6 708 aa27.54■■■□□ 2
H2AFV-202ENST00000308153 LRRC56Q8IYG6 542 aaPredicted RBP27.54■■■□□ 2
H2AFV-202ENST00000308153 SERBP1Q8NC51 408 aaKnown RBP eCLIP27.54■■■□□ 2
H2AFV-202ENST00000308153 CALML6Q8TD86 181 aa27.54■■■□□ 2
H2AFV-202ENST00000308153 INPP5DQ92835 1189 aa27.54■■■□□ 2
H2AFV-202ENST00000308153 COMMD10Q9Y6G5 202 aa27.54■■■□□ 2
H2AFV-202ENST00000308153 ALOX12BO75342 701 aa27.53■■■□□ 2
H2AFV-202ENST00000308153 ALPPP05187 535 aa27.53■■■□□ 2
H2AFV-202ENST00000308153 ENO3P13929 434 aaPredicted RBP27.53■■■□□ 2
H2AFV-202ENST00000308153 AIMP2Q13155 320 aaKnown RBP27.53■■■□□ 2
H2AFV-202ENST00000308153 AARSD1Q9BTE6 412 aaKnown RBP27.53■■■□□ 2
H2AFV-202ENST00000308153 GRPEL1Q9HAV7 217 aa27.53■■■□□ 2
H2AFV-202ENST00000308153 ZBTB20Q9HC78 741 aaPredicted RBP27.53■■■□□ 2
H2AFV-202ENST00000308153 ZNF304Q9HCX3 659 aa27.53■■■□□ 2
H2AFV-202ENST00000308153 HEATR5BQ9P2D3 2071 aa27.52■■■□□ 2
H2AFV-202ENST00000308153 ZSCAN12O43309 604 aa27.52■■■□□ 2
H2AFV-202ENST00000308153 SKIV2L2P42285 1042 aaKnown RBP27.52■■■□□ 2
H2AFV-202ENST00000308153 EMP3P54852 163 aa27.52■■■□□ 2
H2AFV-202ENST00000308153 TIAL1Q01085 375 aaKnown RBP eCLIP27.52■■■□□ 25e-6■■■■□ 19.9
H2AFV-202ENST00000308153 TSTA3Q13630 321 aaPredicted RBP27.52■■■□□ 2
H2AFV-202ENST00000308153 CRYMQ14894 314 aa27.52■■■□□ 2
H2AFV-202ENST00000308153 PPP1R7Q15435 360 aa27.52■■■□□ 2
H2AFV-202ENST00000308153 MUM1Q2TAK8 710 aa27.52■■■□□ 2
H2AFV-202ENST00000308153 PLEKHN1Q494U1 663 aaPredicted RBP27.52■■■□□ 2
H2AFV-202ENST00000308153 PRMT9Q6P2P2 845 aa27.52■■■□□ 2
H2AFV-202ENST00000308153 PIWIL4Q7Z3Z4 852 aaKnown RBP27.52■■■□□ 2
H2AFV-202ENST00000308153 KCNMB4Q86W47 210 aa27.52■■■□□ 2
H2AFV-202ENST00000308153 CPNE9Q8IYJ1 553 aa27.52■■■□□ 2
H2AFV-202ENST00000308153 OR2A5Q96R48 311 aa27.52■■■□□ 2
H2AFV-202ENST00000308153 MESP1Q9BRJ9 268 aa27.52■■■□□ 2
H2AFV-202ENST00000308153 FAM167BQ9BTA0 163 aa27.52■■■□□ 2
H2AFV-202ENST00000308153 DDX47Q9H0S4 455 aaKnown RBP27.52■■■□□ 2
H2AFV-202ENST00000308153 SEMA3GQ9NS98 782 aa27.52■■■□□ 2
H2AFV-202ENST00000308153 IARS2Q9NSE4 1012 aaKnown RBP27.52■■■□□ 2
H2AFV-202ENST00000308153 RP1L1Q8IWN7 2480 aaPredicted RBP27.52■■■□□ 2
H2AFV-202ENST00000308153 MAST4O15021 2626 aa27.51■■□□□ 1.99
H2AFV-202ENST00000308153 ZNF839A8K0R7 811 aa27.51■■□□□ 1.99
H2AFV-202ENST00000308153 KLHL41O60662 606 aa27.51■■□□□ 1.99
H2AFV-202ENST00000308153 ERVK-10P10266 1014 aa27.51■■□□□ 1.99
H2AFV-202ENST00000308153 PGAM1P18669 254 aa27.51■■□□□ 1.99
H2AFV-202ENST00000308153 PRAMEF13Q5VWM6 474 aa27.51■■□□□ 1.99
H2AFV-202ENST00000308153 ARHGEF39Q8N4T4 335 aa27.51■■□□□ 1.99
H2AFV-202ENST00000308153 C2CD4AQ8NCU7 369 aaPredicted RBP27.51■■□□□ 1.99
H2AFV-202ENST00000308153 STT3BQ8TCJ2 826 aa27.51■■□□□ 1.99
H2AFV-202ENST00000308153 SLCO2A1Q92959 643 aa27.51■■□□□ 1.99
H2AFV-202ENST00000308153 COL26A1Q96A83 441 aa27.51■■□□□ 1.99
H2AFV-202ENST00000308153 TRMT1Q9NXH9 659 aaKnown RBP27.51■■□□□ 1.99
H2AFV-202ENST00000308153 RUVBL1Q9Y265 456 aaKnown RBP27.51■■□□□ 1.99
H2AFV-202ENST00000308153 B3GNT3Q9Y2A9 372 aa27.51■■□□□ 1.99
H2AFV-202ENST00000308153 USP9YO00507 2555 aaPredicted RBP27.5■■□□□ 1.99
H2AFV-202ENST00000308153 IGLV3-12A0A075B6K2 115 aa27.5■■□□□ 1.99
H2AFV-202ENST00000308153 DNALI1O14645 258 aaPredicted RBP27.5■■□□□ 1.99
H2AFV-202ENST00000308153 VPS26AO75436 327 aa27.5■■□□□ 1.99
H2AFV-202ENST00000308153 BANF1O75531 89 aa27.5■■□□□ 1.99
H2AFV-202ENST00000308153 IPO13O94829 963 aaKnown RBP27.5■■□□□ 1.99
H2AFV-202ENST00000308153 CCNDBP1O95273 360 aa27.5■■□□□ 1.99
H2AFV-202ENST00000308153 SYF2O95926 243 aaKnown RBP27.5■■□□□ 1.99
H2AFV-202ENST00000308153 ITGA3P26006 1051 aa27.5■■□□□ 1.99
H2AFV-202ENST00000308153 IMPA1P29218 277 aa27.5■■□□□ 1.99
H2AFV-202ENST00000308153 KLC1Q07866 573 aa27.5■■□□□ 1.99
H2AFV-202ENST00000308153 PTK6Q13882 451 aa27.5■■□□□ 1.99
H2AFV-202ENST00000308153 HKDC1Q2TB90 917 aa27.5■■□□□ 1.99
H2AFV-202ENST00000308153 MSS51Q4VC12 460 aa27.5■■□□□ 1.99
H2AFV-202ENST00000308153 ZNF282Q9UDV7 671 aaPredicted RBP27.5■■□□□ 1.99
H2AFV-202ENST00000308153 SMAPO00193 183 aa27.49■■□□□ 1.99
H2AFV-202ENST00000308153 EIF3FO00303 357 aaPredicted RBP27.49■■□□□ 1.99
H2AFV-202ENST00000308153 ZBTB14O43829 449 aa27.49■■□□□ 1.99
H2AFV-202ENST00000308153 ZGLP1P0C6A0 271 aa27.49■■□□□ 1.99
H2AFV-202ENST00000308153 EZRP15311 586 aaKnown RBP27.49■■□□□ 1.99
H2AFV-202ENST00000308153 GABRB3P28472 473 aa27.49■■□□□ 1.99
H2AFV-202ENST00000308153 RELAQ04206 551 aa27.49■■□□□ 1.99
H2AFV-202ENST00000308153 DHX9Q08211 1270 aaKnown RBP27.49■■□□□ 1.99
H2AFV-202ENST00000308153 RBBP7Q16576 425 aa27.49■■□□□ 1.99
H2AFV-202ENST00000308153 UBE2R2Q712K3 238 aaPredicted RBP27.49■■□□□ 1.99
H2AFV-202ENST00000308153 CSNK1A1LQ8N752 337 aa27.49■■□□□ 1.99
H2AFV-202ENST00000308153 OR11G2Q8NGC1 345 aa27.49■■□□□ 1.99
H2AFV-202ENST00000308153 CABS1Q96KC9 395 aa27.49■■□□□ 1.99
H2AFV-202ENST00000308153 NDNQ99608 321 aa27.49■■□□□ 1.99
H2AFV-202ENST00000308153 CRB3Q9BUF7 120 aa27.49■■□□□ 1.99
H2AFV-202ENST00000308153 CUEDC1Q9NWM3 386 aaPredicted RBP27.49■■□□□ 1.99
H2AFV-202ENST00000308153 ASIC3Q9UHC3 531 aa27.49■■□□□ 1.99
H2AFV-202ENST00000308153 PCYOX1Q9UHG3 505 aa27.49■■□□□ 1.99
H2AFV-202ENST00000308153 DOCK10Q96BY6 2186 aa27.49■■□□□ 1.99
H2AFV-202ENST00000308153 TCP11X1B4DZS4 312 aa27.48■■□□□ 1.99
H2AFV-202ENST00000308153 IVDP26440 423 aa27.48■■□□□ 1.99
H2AFV-202ENST00000308153 ABATP80404 500 aa27.48■■□□□ 1.99
H2AFV-202ENST00000308153 TUBB8Q3ZCM7 444 aa27.48■■□□□ 1.99
H2AFV-202ENST00000308153 MIEF2Q96C03 454 aa27.48■■□□□ 1.99
H2AFV-202ENST00000308153 SNRNP40Q96DI7 357 aaKnown RBP27.48■■□□□ 1.99
H2AFV-202ENST00000308153 C19orf60Q96EN9 201 aa27.48■■□□□ 1.99
H2AFV-202ENST00000308153 MVB12AQ96EY5 273 aa27.48■■□□□ 1.99
H2AFV-202ENST00000308153 EBNA1BP2Q99848 306 aaKnown RBP27.48■■□□□ 1.99
H2AFV-202ENST00000308153 PLAC1Q9HBJ0 212 aa27.48■■□□□ 1.99
H2AFV-202ENST00000308153 ABCF3Q9NUQ8 709 aa27.48■■□□□ 1.99
H2AFV-202ENST00000308153 MDC1Q14676 2089 aaKnown RBP27.48■■□□□ 1.99
H2AFV-202ENST00000308153 HAT1O14929 419 aa27.47■■□□□ 1.99
H2AFV-202ENST00000308153 FBLP22087 321 aaKnown RBP27.47■■□□□ 1.99
H2AFV-202ENST00000308153 OCA2Q04671 838 aa27.47■■□□□ 1.99
H2AFV-202ENST00000308153 VWA2Q5GFL6 755 aa27.47■■□□□ 1.99
H2AFV-202ENST00000308153 Q6ZS92 163 aa27.47■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms