RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 ATAD5Q96QE3 1844 aa8.99□□□□□ -0.97
PTPRE-202ENST00000306042 OR52A4PA6NMU1 304 aa8.99□□□□□ -0.97
PTPRE-202ENST00000306042 DNAJB1P25685 340 aa8.99□□□□□ -0.97
PTPRE-202ENST00000306042 TCTE1Q5JU00 501 aa8.99□□□□□ -0.97
PTPRE-202ENST00000306042 SYCE2Q6PIF2 218 aa8.99□□□□□ -0.97
PTPRE-202ENST00000306042 TTLL10Q6ZVT0 673 aa8.99□□□□□ -0.97
PTPRE-202ENST00000306042 PLD3Q8IV08 490 aa8.99□□□□□ -0.97
PTPRE-202ENST00000306042 ATP6V1C2Q8NEY4 427 aa8.99□□□□□ -0.97
PTPRE-202ENST00000306042 CEP19Q96LK0 163 aa8.99□□□□□ -0.97
PTPRE-202ENST00000306042 TMEM30AQ9NV96 361 aa8.99□□□□□ -0.97
PTPRE-202ENST00000306042 CALML5Q9NZT1 146 aa8.99□□□□□ -0.97
PTPRE-202ENST00000306042 EDF1O60869 148 aaKnown RBP8.98□□□□□ -0.97
PTPRE-202ENST00000306042 ZMPSTE24O75844 475 aa8.98□□□□□ -0.97
PTPRE-202ENST00000306042 SERPINA6P08185 405 aa8.98□□□□□ -0.97
PTPRE-202ENST00000306042 RPL4P36578 427 aaKnown RBP8.98□□□□□ -0.97
PTPRE-202ENST00000306042 PSME3P61289 254 aa8.98□□□□□ -0.97
PTPRE-202ENST00000306042 BNC1Q01954 994 aa8.98□□□□□ -0.97
PTPRE-202ENST00000306042 DPY19L1Q2PZI1 675 aa8.98□□□□□ -0.97
PTPRE-202ENST00000306042 PAOXQ6QHF9 649 aa8.98□□□□□ -0.97
PTPRE-202ENST00000306042 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.98□□□□□ -0.97
PTPRE-202ENST00000306042 PHF21AQ96BD5 680 aa8.98□□□□□ -0.97
PTPRE-202ENST00000306042 RTP4Q96DX8 246 aa8.98□□□□□ -0.97
PTPRE-202ENST00000306042 CCDC28BQ9BUN5 200 aa8.98□□□□□ -0.97
PTPRE-202ENST00000306042 EPHA6Q9UF33 1036 aa8.98□□□□□ -0.97
PTPRE-202ENST00000306042 RIMKLBQ9ULI2 386 aa8.98□□□□□ -0.97
PTPRE-202ENST00000306042 IGLV3-10A0A075B6K4 115 aa8.98□□□□□ -0.97
PTPRE-202ENST00000306042 ZNF860A6NHJ4 632 aa8.98□□□□□ -0.97
PTPRE-202ENST00000306042 NARSO43776 548 aaKnown RBP8.98□□□□□ -0.97
PTPRE-202ENST00000306042 LDLRP01130 860 aa8.98□□□□□ -0.97
PTPRE-202ENST00000306042 EBLN1P0CF75 366 aa8.98□□□□□ -0.97
PTPRE-202ENST00000306042 TCEA1P23193 301 aaKnown RBP8.98□□□□□ -0.97
PTPRE-202ENST00000306042 RYKP34925 604 aa8.98□□□□□ -0.97
PTPRE-202ENST00000306042 NEK2P51955 445 aa8.98□□□□□ -0.97
PTPRE-202ENST00000306042 TBPL1P62380 186 aa8.98□□□□□ -0.97
PTPRE-202ENST00000306042 HTR4Q13639 388 aa8.98□□□□□ -0.97
PTPRE-202ENST00000306042 HKDC1Q2TB90 917 aa8.98□□□□□ -0.97
PTPRE-202ENST00000306042 CASP12Q6UXS9 341 aa8.98□□□□□ -0.97
PTPRE-202ENST00000306042 ATCAYQ86WG3 371 aa8.98□□□□□ -0.97
PTPRE-202ENST00000306042 IGDCC3Q8IVU1 814 aa8.98□□□□□ -0.97
PTPRE-202ENST00000306042 ZNF781Q8N8C0 355 aa8.98□□□□□ -0.97
PTPRE-202ENST00000306042 PLA2G15Q8NCC3 412 aa8.98□□□□□ -0.97
PTPRE-202ENST00000306042 C7orf26Q96N11 449 aa8.98□□□□□ -0.97
PTPRE-202ENST00000306042 SLC6A18Q96N87 628 aa8.98□□□□□ -0.97
PTPRE-202ENST00000306042 PTCHD1Q96NR3 888 aa8.98□□□□□ -0.97
PTPRE-202ENST00000306042 FNDC11Q9BVV2 318 aa8.98□□□□□ -0.97
PTPRE-202ENST00000306042 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.98□□□□□ -0.97
PTPRE-202ENST00000306042 ZCCHC3Q9NUD5 404 aaKnown RBP8.98□□□□□ -0.97
PTPRE-202ENST00000306042 BBIP1A8MTZ0 92 aa8.98□□□□□ -0.97
PTPRE-202ENST00000306042 C1GALT1C1LP0DN25 315 aa8.98□□□□□ -0.97
PTPRE-202ENST00000306042 NDUFV2P19404 249 aa8.98□□□□□ -0.97
PTPRE-202ENST00000306042 RPS15AP62244 130 aaKnown RBP8.98□□□□□ -0.97
PTPRE-202ENST00000306042 FIGLAQ6QHK4 219 aa8.98□□□□□ -0.97
PTPRE-202ENST00000306042 ZNF765Q7L2R6 523 aa8.98□□□□□ -0.97
PTPRE-202ENST00000306042 LUZP2Q86TE4 346 aa8.98□□□□□ -0.97
PTPRE-202ENST00000306042 TMC8Q8IU68 726 aa8.98□□□□□ -0.97
PTPRE-202ENST00000306042 SDR16C5Q8N3Y7 309 aa8.98□□□□□ -0.97
PTPRE-202ENST00000306042 MDGA1Q8NFP4 955 aa8.98□□□□□ -0.97
PTPRE-202ENST00000306042 OR4F6Q8NGB9 312 aa8.98□□□□□ -0.97
PTPRE-202ENST00000306042 OR52L1Q8NGH7 329 aa8.98□□□□□ -0.97
PTPRE-202ENST00000306042 ARRDC2Q8TBH0 407 aa8.98□□□□□ -0.97
PTPRE-202ENST00000306042 ZNF707Q96C28 371 aaPredicted RBP8.98□□□□□ -0.97
PTPRE-202ENST00000306042 SLC35G5Q96KT7 338 aa8.98□□□□□ -0.97
PTPRE-202ENST00000306042 CAMK1GQ96NX5 476 aa8.98□□□□□ -0.97
PTPRE-202ENST00000306042 DUSP26Q9BV47 211 aa8.98□□□□□ -0.97
PTPRE-202ENST00000306042 TBL1XR1Q9BZK7 514 aa8.98□□□□□ -0.97
PTPRE-202ENST00000306042 MYLK2Q9H1R3 596 aa8.98□□□□□ -0.97
PTPRE-202ENST00000306042 TMEM27Q9HBJ8 222 aa8.98□□□□□ -0.97
PTPRE-202ENST00000306042 SAR1AQ9NR31 198 aa8.98□□□□□ -0.97
PTPRE-202ENST00000306042 OXSMQ9NWU1 459 aa8.98□□□□□ -0.97
PTPRE-202ENST00000306042 RAPGEFL1Q9UHV5 662 aa8.98□□□□□ -0.97
PTPRE-202ENST00000306042 A0A1W2PRB8 838 aa8.97□□□□□ -0.97
PTPRE-202ENST00000306042 MCIDASD6RGH6 385 aa8.97□□□□□ -0.97
PTPRE-202ENST00000306042 CBX6O95503 412 aa8.97□□□□□ -0.97
PTPRE-202ENST00000306042 ACSL1P33121 698 aa8.97□□□□□ -0.97
PTPRE-202ENST00000306042 BMP8BP34820 402 aa8.97□□□□□ -0.97
PTPRE-202ENST00000306042 RPS13P62277 151 aaKnown RBP8.97□□□□□ -0.97
PTPRE-202ENST00000306042 LRIT3Q3SXY7 679 aa8.97□□□□□ -0.97
PTPRE-202ENST00000306042 TSSK4Q6SA08 328 aa8.97□□□□□ -0.97
PTPRE-202ENST00000306042 DEF8Q6ZN54 512 aa8.97□□□□□ -0.97
PTPRE-202ENST00000306042 NATD1Q8N6N6 113 aa8.97□□□□□ -0.97
PTPRE-202ENST00000306042 TIMM29Q9BSF4 260 aa8.97□□□□□ -0.97
PTPRE-202ENST00000306042 BTBD10Q9BSF8 475 aa8.97□□□□□ -0.97
PTPRE-202ENST00000306042 OR8D2Q9GZM6 311 aa8.97□□□□□ -0.97
PTPRE-202ENST00000306042 MS4A12Q9NXJ0 267 aa8.97□□□□□ -0.97
PTPRE-202ENST00000306042 TAAR2Q9P1P5 351 aa8.97□□□□□ -0.97
PTPRE-202ENST00000306042 COPG1Q9Y678 874 aaKnown RBP8.97□□□□□ -0.97
PTPRE-202ENST00000306042 DUXAA6NLW8 204 aa8.97□□□□□ -0.97
PTPRE-202ENST00000306042 NRP2O60462 931 aa8.97□□□□□ -0.97
PTPRE-202ENST00000306042 SNX3O60493 162 aa8.97□□□□□ -0.97
PTPRE-202ENST00000306042 PDE5AO76074 875 aa8.97□□□□□ -0.97
PTPRE-202ENST00000306042 HLA-DQA2P01906 255 aa8.97□□□□□ -0.97
PTPRE-202ENST00000306042 EFNA1P20827 205 aaPredicted RBP8.97□□□□□ -0.97
PTPRE-202ENST00000306042 ARSFP54793 590 aa8.97□□□□□ -0.97
PTPRE-202ENST00000306042 MTAPQ13126 283 aa8.97□□□□□ -0.97
PTPRE-202ENST00000306042 UBAP2LQ14157 1087 aaKnown RBP8.97□□□□□ -0.97
PTPRE-202ENST00000306042 VN1R5Q7Z5H4 357 aa8.97□□□□□ -0.97
PTPRE-202ENST00000306042 ANKRD46Q86W74 232 aa8.97□□□□□ -0.97
PTPRE-202ENST00000306042 CADM2Q8N3J6 435 aa8.97□□□□□ -0.97
PTPRE-202ENST00000306042 GLB1L3Q8NCI6 653 aaPredicted RBP8.97□□□□□ -0.97
PTPRE-202ENST00000306042 RCN3Q96D15 328 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms