RNA–Protein interactions for RNA: ENST00000305481.10

USP47-201, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 3,577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-201ENST00000305481 IL17FQ96PD4 163 aa6.33□□□□□ -1.4
USP47-201ENST00000305481 TEX101Q9BY14 249 aa6.33□□□□□ -1.4
USP47-201ENST00000305481 SPNS1Q9H2V7 528 aa6.33□□□□□ -1.4
USP47-201ENST00000305481 GPRC5BQ9NZH0 403 aa6.33□□□□□ -1.4
USP47-201ENST00000305481 PLAGL1Q9UM63 463 aa6.33□□□□□ -1.4
USP47-201ENST00000305481 MAN2B2Q9Y2E5 1009 aa6.33□□□□□ -1.4
USP47-201ENST00000305481 AP4B1Q9Y6B7 739 aa6.33□□□□□ -1.4
USP47-201ENST00000305481 KCNE2Q9Y6J6 123 aa6.33□□□□□ -1.4
USP47-201ENST00000305481 SOCS2O14508 198 aa6.32□□□□□ -1.4
USP47-201ENST00000305481 HNRNPRO43390 633 aaKnown RBP6.32□□□□□ -1.4
USP47-201ENST00000305481 SCN2BO60939 215 aa6.32□□□□□ -1.4
USP47-201ENST00000305481 PAK4O96013 591 aaPredicted RBP6.32□□□□□ -1.4
USP47-201ENST00000305481 GSNP06396 782 aa6.32□□□□□ -1.4
USP47-201ENST00000305481 GPIP06744 558 aa6.32□□□□□ -1.4
USP47-201ENST00000305481 GGT1P19440 569 aa6.32□□□□□ -1.4
USP47-201ENST00000305481 PSMA4P25789 261 aaKnown RBP6.32□□□□□ -1.4
USP47-201ENST00000305481 S100A3P33764 101 aa6.32□□□□□ -1.4
USP47-201ENST00000305481 LTBRP36941 435 aa6.32□□□□□ -1.4
USP47-201ENST00000305481 GZMMP51124 257 aa6.32□□□□□ -1.4
USP47-201ENST00000305481 WNT3P56703 355 aa6.32□□□□□ -1.4
USP47-201ENST00000305481 ZNF33BQ06732 778 aa6.32□□□□□ -1.4
USP47-201ENST00000305481 CYP4F3Q08477 520 aa6.32□□□□□ -1.4
USP47-201ENST00000305481 MTAPQ13126 283 aa6.32□□□□□ -1.4
USP47-201ENST00000305481 AGERQ15109 404 aa6.32□□□□□ -1.4
USP47-201ENST00000305481 UGT8Q16880 541 aa6.32□□□□□ -1.4
USP47-201ENST00000305481 PGS1Q32NB8 556 aa6.32□□□□□ -1.4
USP47-201ENST00000305481 CAPN13Q6MZZ7 669 aaPredicted RBP6.32□□□□□ -1.4
USP47-201ENST00000305481 CES5AQ6NT32 575 aa6.32□□□□□ -1.4
USP47-201ENST00000305481 ZNF551Q7Z340 670 aaPredicted RBP6.32□□□□□ -1.4
USP47-201ENST00000305481 TMPRSS11BQ86T26 416 aa6.32□□□□□ -1.4
USP47-201ENST00000305481 AMZ2Q86W34 360 aa6.32□□□□□ -1.4
USP47-201ENST00000305481 PROSER1Q86XN7 944 aa6.32□□□□□ -1.4
USP47-201ENST00000305481 MARVELD2Q8N4S9 558 aa6.32□□□□□ -1.4
USP47-201ENST00000305481 ZNF548Q8NEK5 533 aaPredicted RBP6.32□□□□□ -1.4
USP47-201ENST00000305481 OR7A2PQ8NGA2 310 aa6.32□□□□□ -1.4
USP47-201ENST00000305481 KLK6Q92876 244 aa6.32□□□□□ -1.4
USP47-201ENST00000305481 WDR34Q96EX3 536 aa6.32□□□□□ -1.4
USP47-201ENST00000305481 ZNF597Q96LX8 424 aa6.32□□□□□ -1.4
USP47-201ENST00000305481 EFHD1Q9BUP0 239 aa6.32□□□□□ -1.4
USP47-201ENST00000305481 KCNH6Q9H252 994 aa6.32□□□□□ -1.4
USP47-201ENST00000305481 KAT8Q9H7Z6 458 aaKnown RBP6.32□□□□□ -1.4
USP47-201ENST00000305481 CARS2Q9HA77 564 aaKnown RBP6.32□□□□□ -1.4
USP47-201ENST00000305481 BRF2Q9HAW0 419 aa6.32□□□□□ -1.4
USP47-201ENST00000305481 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.32□□□□□ -1.4
USP47-201ENST00000305481 RAB26Q9ULW5 256 aa6.32□□□□□ -1.4
USP47-201ENST00000305481 BTBD3Q9Y2F9 522 aa6.32□□□□□ -1.4
USP47-201ENST00000305481 PCDHGA11Q9Y5H2 935 aa6.32□□□□□ -1.4
USP47-201ENST00000305481 TRIOO75962 3097 aa6.32□□□□□ -1.4
USP47-201ENST00000305481 TICRRQ7Z2Z1 1910 aa6.32□□□□□ -1.4
USP47-201ENST00000305481 NUMA1Q14980 2115 aa6.32□□□□□ -1.4
USP47-201ENST00000305481 DLGAP1O14490 977 aa6.32□□□□□ -1.4
USP47-201ENST00000305481 TXNDC9O14530 226 aa6.32□□□□□ -1.4
USP47-201ENST00000305481 ADAM23O75077 832 aa6.32□□□□□ -1.4
USP47-201ENST00000305481 ADH1BP00325 375 aa6.32□□□□□ -1.4
USP47-201ENST00000305481 MT-ND1P03886 318 aa6.32□□□□□ -1.4
USP47-201ENST00000305481 LINGO3P0C6S8 592 aa6.32□□□□□ -1.4
USP47-201ENST00000305481 TRIM23P36406 574 aa6.32□□□□□ -1.4
USP47-201ENST00000305481 TNFRSF4P43489 277 aa6.32□□□□□ -1.4
USP47-201ENST00000305481 CCT8P50990 548 aa6.32□□□□□ -1.4
USP47-201ENST00000305481 PNLIPRP1P54315 467 aa6.32□□□□□ -1.4
USP47-201ENST00000305481 SLC14A1Q13336 389 aa6.32□□□□□ -1.4
USP47-201ENST00000305481 STARD3Q14849 445 aa6.32□□□□□ -1.4
USP47-201ENST00000305481 IRF4Q15306 451 aa6.32□□□□□ -1.4
USP47-201ENST00000305481 TMEM196Q5HYL7 178 aa6.32□□□□□ -1.4
USP47-201ENST00000305481 METRNLQ641Q3 311 aa6.32□□□□□ -1.4
USP47-201ENST00000305481 OR4F3Q6IEY1 312 aa6.32□□□□□ -1.4
USP47-201ENST00000305481 PDZD3Q86UT5 571 aa6.32□□□□□ -1.4
USP47-201ENST00000305481 C2orf73Q8N5S3 287 aaPredicted RBP6.32□□□□□ -1.4
USP47-201ENST00000305481 FAM86B1Q8N7N1 296 aa6.32□□□□□ -1.4
USP47-201ENST00000305481 TP53I13Q8NBR0 393 aaPredicted RBP6.32□□□□□ -1.4
USP47-201ENST00000305481 CSGALNACT1Q8TDX6 532 aa6.32□□□□□ -1.4
USP47-201ENST00000305481 CHTF18Q8WVB6 975 aa6.32□□□□□ -1.4
USP47-201ENST00000305481 MIEF2Q96C03 454 aa6.32□□□□□ -1.4
USP47-201ENST00000305481 CCDC115Q96NT0 180 aa6.32□□□□□ -1.4
USP47-201ENST00000305481 CPPED1Q9BRF8 314 aaPredicted RBP6.32□□□□□ -1.4
USP47-201ENST00000305481 THUMPD3Q9BV44 507 aaKnown RBP6.32□□□□□ -1.4
USP47-201ENST00000305481 CFAP20Q9Y6A4 193 aaKnown RBP6.32□□□□□ -1.4
USP47-201ENST00000305481 PCM1Q15154 2024 aa6.32□□□□□ -1.4
USP47-201ENST00000305481 BRWD1Q9NSI6 2320 aa6.32□□□□□ -1.4
USP47-201ENST00000305481 A0A096LPI6 279 aa6.32□□□□□ -1.4
USP47-201ENST00000305481 A0A1W2PQF6 199 aa6.32□□□□□ -1.4
USP47-201ENST00000305481 KANSL1LA0AUZ9 987 aa6.32□□□□□ -1.4
USP47-201ENST00000305481 ARHGAP10A1A4S6 786 aa6.32□□□□□ -1.4
USP47-201ENST00000305481 KLHL33A6NCF5 533 aa6.32□□□□□ -1.4
USP47-201ENST00000305481 H0YJX3 145 aa6.32□□□□□ -1.4
USP47-201ENST00000305481 PDLIM1O00151 329 aa6.32□□□□□ -1.4
USP47-201ENST00000305481 ACOX3O15254 700 aa6.32□□□□□ -1.4
USP47-201ENST00000305481 MAP3K13O43283 966 aa6.32□□□□□ -1.4
USP47-201ENST00000305481 ERN1O75460 977 aaKnown RBP6.32□□□□□ -1.4
USP47-201ENST00000305481 KLHL18O94889 574 aa6.32□□□□□ -1.4
USP47-201ENST00000305481 PCNAP12004 261 aa6.32□□□□□ -1.4
USP47-201ENST00000305481 IL10P22301 178 aa6.32□□□□□ -1.4
USP47-201ENST00000305481 MAPK1P28482 360 aa6.32□□□□□ -1.4
USP47-201ENST00000305481 RPS13P62277 151 aaKnown RBP6.32□□□□□ -1.4
USP47-201ENST00000305481 MEF2AQ02078 507 aaPredicted RBP6.32□□□□□ -1.4
USP47-201ENST00000305481 PLOD1Q02809 727 aaPredicted RBP6.32□□□□□ -1.4
USP47-201ENST00000305481 TSTA3Q13630 321 aaPredicted RBP6.32□□□□□ -1.4
USP47-201ENST00000305481 AASDHQ4L235 1098 aaPredicted RBP6.32□□□□□ -1.4
USP47-201ENST00000305481 ATG9BQ674R7 924 aa6.32□□□□□ -1.4
USP47-201ENST00000305481 ANKRD26P1Q6NSI1 321 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms