RNA–Protein interactions for RNA: ENST00000299633.6

HDGFL3-201, Transcript of HDGF like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDGFL3, Length 12,733 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-201ENST00000299633 SERPINB11Q96P15 392 aa10.92□□□□□ -0.66
HDGFL3-201ENST00000299633 ATG5Q9H1Y0 275 aa10.92□□□□□ -0.66
HDGFL3-201ENST00000299633 ATG4BQ9Y4P1 393 aa10.92□□□□□ -0.66
HDGFL3-201ENST00000299633 TRAPPC13A5PLN9 417 aa10.92□□□□□ -0.66
HDGFL3-201ENST00000299633 ALDH7A1P49419 539 aaKnown RBP10.92□□□□□ -0.66
HDGFL3-201ENST00000299633 HMGN3Q15651 99 aa10.92□□□□□ -0.66
HDGFL3-201ENST00000299633 PLCXD1Q9NUJ7 323 aa10.92□□□□□ -0.66
HDGFL3-201ENST00000299633 C19orf81C9J6K1 198 aa10.92□□□□□ -0.66
HDGFL3-201ENST00000299633 MOAP1Q96BY2 351 aa10.92□□□□□ -0.66
HDGFL3-201ENST00000299633 FZD3Q9NPG1 666 aa10.92□□□□□ -0.66
HDGFL3-201ENST00000299633 MED12LQ86YW9 2145 aa10.92□□□□□ -0.66
HDGFL3-201ENST00000299633 CSDE1O75534 798 aaKnown RBP10.92□□□□□ -0.66
HDGFL3-201ENST00000299633 BCKDHAP12694 445 aa10.92□□□□□ -0.66
HDGFL3-201ENST00000299633 GRK6P43250 576 aa10.92□□□□□ -0.66
HDGFL3-201ENST00000299633 CHRFAM7AQ494W8 412 aa10.92□□□□□ -0.66
HDGFL3-201ENST00000299633 C4orf17Q53FE4 359 aa10.92□□□□□ -0.66
HDGFL3-201ENST00000299633 TAPT1Q6NXT6 567 aa10.92□□□□□ -0.66
HDGFL3-201ENST00000299633 POMZP3Q6PJE2 187 aa10.92□□□□□ -0.66
HDGFL3-201ENST00000299633 ZNF439Q8NDP4 499 aa10.92□□□□□ -0.66
HDGFL3-201ENST00000299633 SCRN2Q96FV2 425 aa10.92□□□□□ -0.66
HDGFL3-201ENST00000299633 SNX27Q96L92 541 aa10.92□□□□□ -0.66
HDGFL3-201ENST00000299633 TTYH2Q9BSA4 534 aa10.92□□□□□ -0.66
HDGFL3-201ENST00000299633 TCEAL2Q9H3H9 227 aaPredicted RBP10.92□□□□□ -0.66
HDGFL3-201ENST00000299633 ACO1P21399 889 aaKnown RBP10.92□□□□□ -0.66
HDGFL3-201ENST00000299633 ITPK1Q13572 414 aa10.92□□□□□ -0.66
HDGFL3-201ENST00000299633 NADK2Q4G0N4 442 aa10.92□□□□□ -0.66
HDGFL3-201ENST00000299633 KCT2Q8NC54 265 aa10.92□□□□□ -0.66
HDGFL3-201ENST00000299633 CPXM1Q96SM3 734 aa10.92□□□□□ -0.66
HDGFL3-201ENST00000299633 SPOCK3Q9BQ16 436 aa10.92□□□□□ -0.66
HDGFL3-201ENST00000299633 AGO4Q9HCK5 861 aaKnown RBP10.92□□□□□ -0.66
HDGFL3-201ENST00000299633 MYOZ2Q9NPC6 264 aa10.92□□□□□ -0.66
HDGFL3-201ENST00000299633 TSPAN3O60637 253 aa10.92□□□□□ -0.66
HDGFL3-201ENST00000299633 SERPINA7P05543 415 aa10.92□□□□□ -0.66
HDGFL3-201ENST00000299633 TRAM1Q15629 374 aa10.92□□□□□ -0.66
HDGFL3-201ENST00000299633 MOGQ16653 247 aa10.92□□□□□ -0.66
HDGFL3-201ENST00000299633 RALGPS1Q5JS13 557 aa10.92□□□□□ -0.66
HDGFL3-201ENST00000299633 FIGNL1Q6PIW4 674 aa10.92□□□□□ -0.66
HDGFL3-201ENST00000299633 ZFAND2BQ8WV99 257 aa10.92□□□□□ -0.66
HDGFL3-201ENST00000299633 FAM83CQ9BQN1 747 aa10.92□□□□□ -0.66
HDGFL3-201ENST00000299633 PAPOLGQ9BWT3 736 aaKnown RBP10.92□□□□□ -0.66
HDGFL3-201ENST00000299633 UXTQ9UBK9 157 aaPredicted RBP10.92□□□□□ -0.66
HDGFL3-201ENST00000299633 KLF15Q9UIH9 416 aa10.92□□□□□ -0.66
HDGFL3-201ENST00000299633 ADGRB1O14514 1584 aa10.92□□□□□ -0.66
HDGFL3-201ENST00000299633 A0A0A6YYH2 397 aa10.92□□□□□ -0.66
HDGFL3-201ENST00000299633 A6NJ64 397 aa10.92□□□□□ -0.66
HDGFL3-201ENST00000299633 HNRNPLP14866 589 aaKnown RBP eCLIP10.92□□□□□ -0.66
HDGFL3-201ENST00000299633 XKP51811 444 aa10.92□□□□□ -0.66
HDGFL3-201ENST00000299633 NKX2-5P52952 324 aaPredicted RBP10.92□□□□□ -0.66
HDGFL3-201ENST00000299633 GPR153Q6NV75 609 aa10.92□□□□□ -0.66
HDGFL3-201ENST00000299633 SHKBP1Q8TBC3 707 aa10.92□□□□□ -0.66
HDGFL3-201ENST00000299633 MRPS31Q92665 395 aaKnown RBP10.92□□□□□ -0.66
HDGFL3-201ENST00000299633 FBXL21Q9UKT6 434 aa10.92□□□□□ -0.66
HDGFL3-201ENST00000299633 RBAK-RBAKDNI3L0D1 243 aa10.92□□□□□ -0.66
HDGFL3-201ENST00000299633 CSTBP04080 98 aaKnown RBP10.92□□□□□ -0.66
HDGFL3-201ENST00000299633 XRCC1P18887 633 aaPredicted RBP10.92□□□□□ -0.66
HDGFL3-201ENST00000299633 TARDBPQ13148 414 aaKnown RBP eCLIP10.92□□□□□ -0.66
HDGFL3-201ENST00000299633 FBXO16Q8IX29 292 aaPredicted RBP10.92□□□□□ -0.66
HDGFL3-201ENST00000299633 ITPAQ9BY32 194 aa10.92□□□□□ -0.66
HDGFL3-201ENST00000299633 PNPOQ9NVS9 261 aa10.92□□□□□ -0.66
HDGFL3-201ENST00000299633 RLIMQ9NVW2 624 aa10.92□□□□□ -0.66
HDGFL3-201ENST00000299633 NAV1Q8NEY1 1877 aa10.92□□□□□ -0.66
HDGFL3-201ENST00000299633 TMEM150BA6NC51 233 aa10.92□□□□□ -0.66
HDGFL3-201ENST00000299633 CYB561D2O14569 222 aa10.92□□□□□ -0.66
HDGFL3-201ENST00000299633 PORP16435 677 aaPredicted RBP10.92□□□□□ -0.66
HDGFL3-201ENST00000299633 GNAZP19086 355 aa10.92□□□□□ -0.66
HDGFL3-201ENST00000299633 DGKGP49619 791 aa10.92□□□□□ -0.66
HDGFL3-201ENST00000299633 MMP14P50281 582 aa10.92□□□□□ -0.66
HDGFL3-201ENST00000299633 EARS2Q5JPH6 523 aaKnown RBP10.92□□□□□ -0.66
HDGFL3-201ENST00000299633 ABRAQ8N0Z2 381 aa10.92□□□□□ -0.66
HDGFL3-201ENST00000299633 RPLP0P6Q8NHW5 317 aa10.92□□□□□ -0.66
HDGFL3-201ENST00000299633 CYP2W1Q8TAV3 490 aa10.92□□□□□ -0.66
HDGFL3-201ENST00000299633 FBXO44Q9H4M3 255 aa10.92□□□□□ -0.66
HDGFL3-201ENST00000299633 IPPKQ9H8X2 491 aa10.92□□□□□ -0.66
HDGFL3-201ENST00000299633 TPT1P8Q9HAU6 139 aa10.92□□□□□ -0.66
HDGFL3-201ENST00000299633 A0A1W2PRQ8 180 aa10.92□□□□□ -0.66
HDGFL3-201ENST00000299633 H0Y8G0 127 aa10.92□□□□□ -0.66
HDGFL3-201ENST00000299633 TSPAN8P19075 237 aa10.92□□□□□ -0.66
HDGFL3-201ENST00000299633 TCEA1P23193 301 aaKnown RBP10.92□□□□□ -0.66
HDGFL3-201ENST00000299633 IL12BP29460 328 aa10.92□□□□□ -0.66
HDGFL3-201ENST00000299633 STXBP5Q5T5C0 1151 aa10.92□□□□□ -0.66
HDGFL3-201ENST00000299633 ELP2Q6IA86 826 aa10.92□□□□□ -0.66
HDGFL3-201ENST00000299633 MPZL3Q6UWV2 235 aa10.92□□□□□ -0.66
HDGFL3-201ENST00000299633 BAIAP2L2Q6UXY1 529 aa10.92□□□□□ -0.66
HDGFL3-201ENST00000299633 ZBED3Q96IU2 234 aaPredicted RBP10.92□□□□□ -0.66
HDGFL3-201ENST00000299633 CELF6Q96J87 481 aaKnown RBP10.92□□□□□ -0.66
HDGFL3-201ENST00000299633 CIPCQ9C0C6 399 aa10.92□□□□□ -0.66
HDGFL3-201ENST00000299633 OR11A1Q9GZK7 315 aa10.92□□□□□ -0.66
HDGFL3-201ENST00000299633 TGIF2Q9GZN2 237 aa10.92□□□□□ -0.66
HDGFL3-201ENST00000299633 PCDHGC3Q9UN70 934 aa10.92□□□□□ -0.66
HDGFL3-201ENST00000299633 CLCN3P51790 818 aa10.91□□□□□ -0.66
HDGFL3-201ENST00000299633 CLCN5P51795 746 aa10.91□□□□□ -0.66
HDGFL3-201ENST00000299633 PCK2Q16822 640 aa10.91□□□□□ -0.66
HDGFL3-201ENST00000299633 C3orf67Q6ZVT6 689 aa10.91□□□□□ -0.66
HDGFL3-201ENST00000299633 PGAP1Q75T13 922 aa10.91□□□□□ -0.66
HDGFL3-201ENST00000299633 PXKQ7Z7A4 578 aa10.91□□□□□ -0.66
HDGFL3-201ENST00000299633 LINGO1Q96FE5 620 aa10.91□□□□□ -0.66
HDGFL3-201ENST00000299633 COQ10AQ96MF6 247 aa10.91□□□□□ -0.66
HDGFL3-201ENST00000299633 NDC1Q9BTX1 674 aa10.91□□□□□ -0.66
HDGFL3-201ENST00000299633 EIF1AYO14602 144 aaKnown RBP10.91□□□□□ -0.66
HDGFL3-201ENST00000299633 EIF1AXP47813 144 aaKnown RBP10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms