RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 KLHDC9Q8NEP7 349 aa17.23■□□□□ 0.35
CDC42EP3-201ENST00000295324 GIPC3Q8TF64 312 aa17.23■□□□□ 0.35
CDC42EP3-201ENST00000295324 PLAGL1Q9UM63 463 aa17.23■□□□□ 0.35
CDC42EP3-201ENST00000295324 CAPN8A6NHC0 703 aa17.22■□□□□ 0.35
CDC42EP3-201ENST00000295324 ELOA3DA6NLF2 546 aaPredicted RBP17.22■□□□□ 0.35
CDC42EP3-201ENST00000295324 H7C0S8 307 aa17.22■□□□□ 0.35
CDC42EP3-201ENST00000295324 HCN1O60741 890 aa17.22■□□□□ 0.35
CDC42EP3-201ENST00000295324 C1orf61Q13536 156 aa17.22■□□□□ 0.35
CDC42EP3-201ENST00000295324 PDK3Q15120 406 aa17.22■□□□□ 0.35
CDC42EP3-201ENST00000295324 ELOA3BQ3SY89 546 aa17.22■□□□□ 0.35
CDC42EP3-201ENST00000295324 ZC3H14Q6PJT7 736 aaKnown RBP17.22■□□□□ 0.35
CDC42EP3-201ENST00000295324 SUSD1Q6UWL2 747 aa17.22■□□□□ 0.35
CDC42EP3-201ENST00000295324 SLC36A4Q6YBV0 504 aa17.22■□□□□ 0.35
CDC42EP3-201ENST00000295324 ELOA3Q8NG57 546 aa17.22■□□□□ 0.35
CDC42EP3-201ENST00000295324 PGAP3Q96FM1 320 aaPredicted RBP17.22■□□□□ 0.35
CDC42EP3-201ENST00000295324 SLC17A9Q9BYT1 436 aa17.22■□□□□ 0.35
CDC42EP3-201ENST00000295324 TPSD1Q9BZJ3 242 aa17.22■□□□□ 0.35
CDC42EP3-201ENST00000295324 ZIM2Q9NZV7 527 aa17.22■□□□□ 0.35
CDC42EP3-201ENST00000295324 SSR3Q9UNL2 185 aa17.22■□□□□ 0.35
CDC42EP3-201ENST00000295324 RHAGQ02094 409 aa17.22■□□□□ 0.35
CDC42EP3-201ENST00000295324 ZCCHC12Q6PEW1 402 aa17.22■□□□□ 0.35
CDC42EP3-201ENST00000295324 ADGRG6Q86SQ4 1221 aa17.22■□□□□ 0.35
CDC42EP3-201ENST00000295324 IPCEF1Q8WWN9 437 aaPredicted RBP17.22■□□□□ 0.35
CDC42EP3-201ENST00000295324 ZNF347Q96SE7 839 aa17.22■□□□□ 0.35
CDC42EP3-201ENST00000295324 NHSL1Q5SYE7 1610 aa17.22■□□□□ 0.35
CDC42EP3-201ENST00000295324 MID1O15344 667 aa17.22■□□□□ 0.35
CDC42EP3-201ENST00000295324 MPC1LP0DKB6 136 aa17.22■□□□□ 0.35
CDC42EP3-201ENST00000295324 MED22Q15528 200 aa17.22■□□□□ 0.35
CDC42EP3-201ENST00000295324 SLC34A3Q8N130 599 aa17.22■□□□□ 0.35
CDC42EP3-201ENST00000295324 OR4C6Q8NH72 309 aa17.22■□□□□ 0.35
CDC42EP3-201ENST00000295324 SLC35A5Q9BS91 424 aa17.22■□□□□ 0.35
CDC42EP3-201ENST00000295324 NEUROD4Q9HD90 331 aa17.22■□□□□ 0.35
CDC42EP3-201ENST00000295324 RBM7Q9Y580 266 aaKnown RBP17.22■□□□□ 0.35
CDC42EP3-201ENST00000295324 A8MUI8 341 aa17.22■□□□□ 0.35
CDC42EP3-201ENST00000295324 CDH1P12830 882 aa17.22■□□□□ 0.35
CDC42EP3-201ENST00000295324 GPX6P59796 221 aa17.22■□□□□ 0.35
CDC42EP3-201ENST00000295324 OLR1P78380 273 aa17.22■□□□□ 0.35
CDC42EP3-201ENST00000295324 ENKURQ8TC29 256 aa17.22■□□□□ 0.35
CDC42EP3-201ENST00000295324 MR1Q95460 341 aa17.22■□□□□ 0.35
CDC42EP3-201ENST00000295324 CLPTM1LQ96KA5 538 aa17.22■□□□□ 0.35
CDC42EP3-201ENST00000295324 MRPL39Q9NYK5 338 aaKnown RBP17.22■□□□□ 0.35
CDC42EP3-201ENST00000295324 CKLFQ9UBR5 152 aa17.22■□□□□ 0.35
CDC42EP3-201ENST00000295324 AHCYP23526 432 aa17.22■□□□□ 0.35
CDC42EP3-201ENST00000295324 IL12RB1P42701 662 aa17.22■□□□□ 0.35
CDC42EP3-201ENST00000295324 DSTNP60981 165 aa17.22■□□□□ 0.35
CDC42EP3-201ENST00000295324 NCEH1Q6PIU2 408 aa17.22■□□□□ 0.35
CDC42EP3-201ENST00000295324 TIFABQ6ZNK6 161 aa17.22■□□□□ 0.35
CDC42EP3-201ENST00000295324 ZSCAN1Q8NBB4 408 aa17.22■□□□□ 0.35
CDC42EP3-201ENST00000295324 PDE7BQ9NP56 450 aa17.22■□□□□ 0.35
CDC42EP3-201ENST00000295324 LYARQ9NX58 379 aaKnown RBP17.22■□□□□ 0.35
CDC42EP3-201ENST00000295324 FADS3Q9Y5Q0 445 aa17.22■□□□□ 0.35
CDC42EP3-201ENST00000295324 K7ERQ8 282 aa17.21■□□□□ 0.35
CDC42EP3-201ENST00000295324 KCNJ13O60928 360 aa17.21■□□□□ 0.35
CDC42EP3-201ENST00000295324 OR5F1O95221 314 aa17.21■□□□□ 0.35
CDC42EP3-201ENST00000295324 ACRV1P26436 265 aa17.21■□□□□ 0.35
CDC42EP3-201ENST00000295324 PCDH1Q08174 1060 aa17.21■□□□□ 0.35
CDC42EP3-201ENST00000295324 DECR1Q16698 335 aa17.21■□□□□ 0.35
CDC42EP3-201ENST00000295324 MSS51Q4VC12 460 aa17.21■□□□□ 0.35
CDC42EP3-201ENST00000295324 RANBP9Q96S59 729 aa17.21■□□□□ 0.35
CDC42EP3-201ENST00000295324 AP4B1Q9Y6B7 739 aa17.21■□□□□ 0.35
CDC42EP3-201ENST00000295324 CREB1P16220 341 aa17.21■□□□□ 0.35
CDC42EP3-201ENST00000295324 MAPK10P53779 464 aa17.21■□□□□ 0.35
CDC42EP3-201ENST00000295324 ABATP80404 500 aa17.21■□□□□ 0.35
CDC42EP3-201ENST00000295324 RABEPKQ7Z6M1 372 aa17.21■□□□□ 0.35
CDC42EP3-201ENST00000295324 OR4K17Q8NGC6 315 aa17.21■□□□□ 0.35
CDC42EP3-201ENST00000295324 KLHL6Q8WZ60 621 aa17.21■□□□□ 0.35
CDC42EP3-201ENST00000295324 TMEM125Q96AQ2 219 aa17.21■□□□□ 0.35
CDC42EP3-201ENST00000295324 PLEKHG4BQ96PX9 1271 aa17.21■□□□□ 0.35
CDC42EP3-201ENST00000295324 PAIP1Q9H074 479 aaKnown RBP17.21■□□□□ 0.35
CDC42EP3-201ENST00000295324 LINC00597Q9H2U6 94 aa17.21■□□□□ 0.35
CDC42EP3-201ENST00000295324 OR51B5Q9H339 312 aa17.21■□□□□ 0.35
CDC42EP3-201ENST00000295324 AKTIPQ9H8T0 292 aa17.21■□□□□ 0.35
CDC42EP3-201ENST00000295324 CMTM6Q9NX76 183 aa17.21■□□□□ 0.35
CDC42EP3-201ENST00000295324 SNTA1Q13424 505 aa17.21■□□□□ 0.35
CDC42EP3-201ENST00000295324 SCARB2Q14108 478 aa17.21■□□□□ 0.35
CDC42EP3-201ENST00000295324 P4HA3Q7Z4N8 544 aa17.21■□□□□ 0.35
CDC42EP3-201ENST00000295324 CDH24Q86UP0 819 aa17.21■□□□□ 0.35
CDC42EP3-201ENST00000295324 C12orf40Q86WS4 652 aa17.21■□□□□ 0.35
CDC42EP3-201ENST00000295324 FAM81AQ8TBF8 368 aa17.21■□□□□ 0.35
CDC42EP3-201ENST00000295324 RFKQ969G6 155 aa17.21■□□□□ 0.35
CDC42EP3-201ENST00000295324 LRRC3Q9BY71 257 aa17.21■□□□□ 0.35
CDC42EP3-201ENST00000295324 EPB41L1Q9H4G0 881 aa17.21■□□□□ 0.35
CDC42EP3-201ENST00000295324 MS4A12Q9NXJ0 267 aa17.21■□□□□ 0.35
CDC42EP3-201ENST00000295324 SCDO00767 359 aa17.21■□□□□ 0.35
CDC42EP3-201ENST00000295324 MPZL2O60487 215 aa17.21■□□□□ 0.35
CDC42EP3-201ENST00000295324 GADD45GO95257 159 aa17.21■□□□□ 0.35
CDC42EP3-201ENST00000295324 APBB3O95704 486 aa17.21■□□□□ 0.35
CDC42EP3-201ENST00000295324 CEBPBP17676 345 aa17.21■□□□□ 0.35
CDC42EP3-201ENST00000295324 CXCR1P25024 350 aa17.21■□□□□ 0.35
CDC42EP3-201ENST00000295324 SIM2Q14190 667 aaPredicted RBP17.21■□□□□ 0.35
CDC42EP3-201ENST00000295324 FAM110BQ8TC76 370 aa17.21■□□□□ 0.35
CDC42EP3-201ENST00000295324 FGF13Q92913 245 aa17.21■□□□□ 0.35
CDC42EP3-201ENST00000295324 EFHD2Q96C19 240 aaPredicted RBP17.21■□□□□ 0.35
CDC42EP3-201ENST00000295324 HSFX1Q9UBD0 423 aa17.21■□□□□ 0.35
CDC42EP3-201ENST00000295324 MRPS7Q9Y2R9 242 aaKnown RBP17.21■□□□□ 0.35
CDC42EP3-201ENST00000295324 TESMINQ9Y4I5 508 aa17.21■□□□□ 0.35
CDC42EP3-201ENST00000295324 CHST10O43529 356 aa17.2■□□□□ 0.34
CDC42EP3-201ENST00000295324 CHRM1P11229 460 aaPredicted RBP17.2■□□□□ 0.34
CDC42EP3-201ENST00000295324 RABIFP47224 123 aa17.2■□□□□ 0.34
CDC42EP3-201ENST00000295324 MTPNP58546 118 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms