RNA–Protein interactions for RNA: ENST00000292808.5

ABCF3-201, Transcript of ATP binding cassette subfamily F member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene ABCF3, Length 2,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-201ENST00000292808 SLC13A3Q8WWT9 602 aa13.61□□□□□ -0.23
ABCF3-201ENST00000292808 C9orf16Q9BUW7 83 aa13.61□□□□□ -0.23
ABCF3-201ENST00000292808 RBM38Q9H0Z9 239 aaKnown RBP13.61□□□□□ -0.23
ABCF3-201ENST00000292808 OLAHQ9NV23 265 aa13.61□□□□□ -0.23
ABCF3-201ENST00000292808 LMCD1Q9NZU5 365 aa13.61□□□□□ -0.23
ABCF3-201ENST00000292808 C17orf113A0A1B0GUU1 675 aa13.6□□□□□ -0.23
ABCF3-201ENST00000292808 E7EQ34 232 aa13.6□□□□□ -0.23
ABCF3-201ENST00000292808 VILLO15195 856 aa13.6□□□□□ -0.23
ABCF3-201ENST00000292808 DFNA5O60443 496 aa13.6□□□□□ -0.23
ABCF3-201ENST00000292808 BCKDHAP12694 445 aa13.6□□□□□ -0.23
ABCF3-201ENST00000292808 HALP42357 657 aa13.6□□□□□ -0.23
ABCF3-201ENST00000292808 GTF2H3Q13889 308 aa13.6□□□□□ -0.23
ABCF3-201ENST00000292808 COL13A1Q5TAT6 717 aaPredicted RBP13.6□□□□□ -0.23
ABCF3-201ENST00000292808 DNAJC14Q6Y2X3 702 aaPredicted RBP13.6□□□□□ -0.23
ABCF3-201ENST00000292808 TBC1D21Q8IYX1 336 aa13.6□□□□□ -0.23
ABCF3-201ENST00000292808 ZNF514Q96K75 400 aaPredicted RBP13.6□□□□□ -0.23
ABCF3-201ENST00000292808 HAUS8Q9BT25 410 aa13.6□□□□□ -0.23
ABCF3-201ENST00000292808 TM7SF3Q9NS93 570 aa13.6□□□□□ -0.23
ABCF3-201ENST00000292808 ASIC5Q9NY37 505 aa13.6□□□□□ -0.23
ABCF3-201ENST00000292808 SNX6Q9UNH7 406 aa13.6□□□□□ -0.23
ABCF3-201ENST00000292808 TNRC18O15417 2968 aaPredicted RBP13.6□□□□□ -0.23
ABCF3-201ENST00000292808 ARHGAP10A1A4S6 786 aa13.59□□□□□ -0.23
ABCF3-201ENST00000292808 MGAT4DA6NG13 374 aa13.59□□□□□ -0.23
ABCF3-201ENST00000292808 H3BNH8 94 aa13.59□□□□□ -0.23
ABCF3-201ENST00000292808 DLGAP1O14490 977 aa13.59□□□□□ -0.23
ABCF3-201ENST00000292808 KCNH1O95259 989 aa13.59□□□□□ -0.23
ABCF3-201ENST00000292808 JUPP14923 745 aa13.59□□□□□ -0.23
ABCF3-201ENST00000292808 ATP6V1B1P15313 513 aa13.59□□□□□ -0.23
ABCF3-201ENST00000292808 HRH2P25021 359 aa13.59□□□□□ -0.23
ABCF3-201ENST00000292808 NTSR1P30989 418 aa13.59□□□□□ -0.23
ABCF3-201ENST00000292808 PON2Q15165 354 aa13.59□□□□□ -0.23
ABCF3-201ENST00000292808 IRF4Q15306 451 aa13.59□□□□□ -0.23
ABCF3-201ENST00000292808 ATP6AP1Q15904 470 aa13.59□□□□□ -0.23
ABCF3-201ENST00000292808 USP39Q53GS9 565 aaKnown RBP13.59□□□□□ -0.23
ABCF3-201ENST00000292808 RBM44Q6ZP01 1051 aaKnown RBP13.59□□□□□ -0.23
ABCF3-201ENST00000292808 EPHX4Q8IUS5 362 aa13.59□□□□□ -0.23
ABCF3-201ENST00000292808 CBR4Q8N4T8 237 aa13.59□□□□□ -0.23
ABCF3-201ENST00000292808 TP53I13Q8NBR0 393 aaPredicted RBP13.59□□□□□ -0.23
ABCF3-201ENST00000292808 HM13Q8TCT9 377 aa13.59□□□□□ -0.23
ABCF3-201ENST00000292808 ZNF480Q8WV37 535 aa13.59□□□□□ -0.23
ABCF3-201ENST00000292808 KLK6Q92876 244 aa13.59□□□□□ -0.23
ABCF3-201ENST00000292808 SH3GL3Q99963 347 aa13.59□□□□□ -0.23
ABCF3-201ENST00000292808 TEX101Q9BY14 249 aa13.59□□□□□ -0.23
ABCF3-201ENST00000292808 ZDHHC5Q9C0B5 715 aa13.59□□□□□ -0.23
ABCF3-201ENST00000292808 OR52A5Q9H2C5 316 aa13.59□□□□□ -0.23
ABCF3-201ENST00000292808 TTYH1Q9H313 450 aaPredicted RBP13.59□□□□□ -0.23
ABCF3-201ENST00000292808 VAPAQ9P0L0 249 aa13.59□□□□□ -0.23
ABCF3-201ENST00000292808 ANAPC2Q9UJX6 822 aa13.59□□□□□ -0.23
ABCF3-201ENST00000292808 MYRFQ9Y2G1 1151 aa13.59□□□□□ -0.23
ABCF3-201ENST00000292808 DLGAP4Q9Y2H0 992 aa13.59□□□□□ -0.23
ABCF3-201ENST00000292808 NEUROG3Q9Y4Z2 214 aa13.59□□□□□ -0.23
ABCF3-201ENST00000292808 MT-ND1P03886 318 aa13.59□□□□□ -0.23
ABCF3-201ENST00000292808 DYNC1I2Q13409 638 aaKnown RBP13.59□□□□□ -0.23
ABCF3-201ENST00000292808 MAPKAPK3Q16644 382 aa13.59□□□□□ -0.23
ABCF3-201ENST00000292808 TMTC4Q5T4D3 741 aa13.59□□□□□ -0.23
ABCF3-201ENST00000292808 LRRC56Q8IYG6 542 aaPredicted RBP13.59□□□□□ -0.23
ABCF3-201ENST00000292808 ALDH16A1Q8IZ83 802 aa13.59□□□□□ -0.23
ABCF3-201ENST00000292808 TSPAN14Q8NG11 270 aa13.59□□□□□ -0.23
ABCF3-201ENST00000292808 ATL1Q8WXF7 558 aa13.59□□□□□ -0.23
ABCF3-201ENST00000292808 MED8Q96G25 268 aa13.59□□□□□ -0.23
ABCF3-201ENST00000292808 SEPHS2Q99611 448 aa13.59□□□□□ -0.23
ABCF3-201ENST00000292808 GRIP2Q9C0E4 1043 aa13.59□□□□□ -0.23
ABCF3-201ENST00000292808 RPF2Q9H7B2 306 aaKnown RBP13.59□□□□□ -0.23
ABCF3-201ENST00000292808 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.59□□□□□ -0.23
ABCF3-201ENST00000292808 SH2B3Q9UQQ2 575 aa13.59□□□□□ -0.23
ABCF3-201ENST00000292808 PCDHB3Q9Y5E6 796 aa13.59□□□□□ -0.23
ABCF3-201ENST00000292808 MYOCOSA0A1B0GUC4 107 aa13.58□□□□□ -0.23
ABCF3-201ENST00000292808 PDLIM1O00151 329 aa13.58□□□□□ -0.23
ABCF3-201ENST00000292808 ACOX3O15254 700 aa13.58□□□□□ -0.23
ABCF3-201ENST00000292808 PGRP06401 933 aa13.58□□□□□ -0.23
ABCF3-201ENST00000292808 PRPH2P23942 346 aa13.58□□□□□ -0.23
ABCF3-201ENST00000292808 MAPK9P45984 424 aa13.58□□□□□ -0.23
ABCF3-201ENST00000292808 PCDH1Q08174 1060 aa13.58□□□□□ -0.23
ABCF3-201ENST00000292808 DOC2AQ14183 400 aa13.58□□□□□ -0.23
ABCF3-201ENST00000292808 GLYATQ6IB77 296 aa13.58□□□□□ -0.23
ABCF3-201ENST00000292808 ADNP2Q6IQ32 1131 aa13.58□□□□□ -0.23
ABCF3-201ENST00000292808 KRT80Q6KB66 452 aa13.58□□□□□ -0.23
ABCF3-201ENST00000292808 GTF2H4Q92759 462 aa13.58□□□□□ -0.23
ABCF3-201ENST00000292808 BIRC7Q96CA5 298 aa13.58□□□□□ -0.23
ABCF3-201ENST00000292808 FOPNLQ96NB1 174 aa13.58□□□□□ -0.23
ABCF3-201ENST00000292808 NECTIN4Q96NY8 510 aa13.58□□□□□ -0.23
ABCF3-201ENST00000292808 TSSK3Q96PN8 268 aa13.58□□□□□ -0.23
ABCF3-201ENST00000292808 FBXL12Q9NXK8 326 aa13.58□□□□□ -0.23
ABCF3-201ENST00000292808 PTTG2Q9NZH5 202 aa13.58□□□□□ -0.23
ABCF3-201ENST00000292808 DMTF1Q9Y222 760 aa13.58□□□□□ -0.23
ABCF3-201ENST00000292808 OR1A2Q9Y585 309 aa13.58□□□□□ -0.23
ABCF3-201ENST00000292808 SERTM1A2A2V5 107 aa13.58□□□□□ -0.24
ABCF3-201ENST00000292808 NPIPB8E9PQR5 432 aa13.58□□□□□ -0.24
ABCF3-201ENST00000292808 PLRG1O43660 514 aaKnown RBP13.58□□□□□ -0.24
ABCF3-201ENST00000292808 RASAL1O95294 804 aa13.58□□□□□ -0.24
ABCF3-201ENST00000292808 KLF8O95600 359 aaPredicted RBP13.58□□□□□ -0.24
ABCF3-201ENST00000292808 FUCA1P04066 466 aa13.58□□□□□ -0.24
ABCF3-201ENST00000292808 ZNF23P17027 643 aa13.58□□□□□ -0.24
ABCF3-201ENST00000292808 TUBA4AP68366 448 aa13.58□□□□□ -0.24
ABCF3-201ENST00000292808 TMEM259Q4ZIN3 620 aa13.58□□□□□ -0.24
ABCF3-201ENST00000292808 FRG2Q64ET8 278 aa13.58□□□□□ -0.24
ABCF3-201ENST00000292808 TRMT11Q7Z4G4 463 aaKnown RBP13.58□□□□□ -0.24
ABCF3-201ENST00000292808 OXR1Q8N573 874 aa13.58□□□□□ -0.24
ABCF3-201ENST00000292808 ZFP28Q8NHY6 868 aa13.58□□□□□ -0.24
ABCF3-201ENST00000292808 WDR20Q8TBZ3 569 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms