RNA–Protein interactions for RNA: ENST00000288599.9

NCOA1-201, Transcript of nuclear receptor coactivator 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCOA1, Length 6,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCOA1-201ENST00000288599 COMTD1Q86VU5 262 aa4.28□□□□□ -1.72
NCOA1-201ENST00000288599 SPPL2CQ8IUH8 684 aa4.28□□□□□ -1.72
NCOA1-201ENST00000288599 UEVLDQ8IX04 471 aa4.28□□□□□ -1.72
NCOA1-201ENST00000288599 GPR137CQ8N3F9 429 aa4.28□□□□□ -1.72
NCOA1-201ENST00000288599 TMEM132CQ8N3T6 1108 aa4.28□□□□□ -1.72
NCOA1-201ENST00000288599 SPERTQ8NA61 448 aa4.28□□□□□ -1.72
NCOA1-201ENST00000288599 TTLQ8NG68 377 aa4.28□□□□□ -1.72
NCOA1-201ENST00000288599 GDPD5Q8WTR4 605 aa4.28□□□□□ -1.72
NCOA1-201ENST00000288599 NKD2Q969F2 451 aaPredicted RBP4.28□□□□□ -1.72
NCOA1-201ENST00000288599 NT5C3BQ969T7 300 aa4.28□□□□□ -1.72
NCOA1-201ENST00000288599 KLHDC7BQ96G42 594 aa4.28□□□□□ -1.72
NCOA1-201ENST00000288599 LIN37Q96GY3 246 aaPredicted RBP4.28□□□□□ -1.72
NCOA1-201ENST00000288599 FAM20AQ96MK3 541 aa4.28□□□□□ -1.72
NCOA1-201ENST00000288599 TMEM43Q9BTV4 400 aa4.28□□□□□ -1.72
NCOA1-201ENST00000288599 FNDC11Q9BVV2 318 aa4.28□□□□□ -1.72
NCOA1-201ENST00000288599 ABCD2Q9UBJ2 740 aa4.28□□□□□ -1.72
NCOA1-201ENST00000288599 PRODH2Q9UF12 536 aa4.28□□□□□ -1.72
NCOA1-201ENST00000288599 NEU2Q9Y3R4 380 aa4.28□□□□□ -1.72
NCOA1-201ENST00000288599 RPL36Q9Y3U8 105 aaKnown RBP4.28□□□□□ -1.72
NCOA1-201ENST00000288599 BCL9LQ86UU0 1499 aa4.28□□□□□ -1.72
NCOA1-201ENST00000288599 ECM29Q5VYK3 1845 aa4.28□□□□□ -1.72
NCOA1-201ENST00000288599 ILVBLA1L0T0 632 aa4.28□□□□□ -1.72
NCOA1-201ENST00000288599 A8MVM7 634 aa4.28□□□□□ -1.72
NCOA1-201ENST00000288599 KCNU1A8MYU2 1149 aa4.28□□□□□ -1.72
NCOA1-201ENST00000288599 SSX5O60225 188 aa4.28□□□□□ -1.72
NCOA1-201ENST00000288599 PTHP01270 115 aa4.28□□□□□ -1.72
NCOA1-201ENST00000288599 NELFEP18615 380 aaKnown RBP4.28□□□□□ -1.72
NCOA1-201ENST00000288599 FUT4P22083 530 aa4.28□□□□□ -1.72
NCOA1-201ENST00000288599 ADCYAP1R1P41586 468 aa4.28□□□□□ -1.72
NCOA1-201ENST00000288599 ERVFC1-1P60608 527 aa4.28□□□□□ -1.72
NCOA1-201ENST00000288599 RPS23P62266 143 aaKnown RBP4.28□□□□□ -1.72
NCOA1-201ENST00000288599 MTF1Q14872 753 aa4.28□□□□□ -1.72
NCOA1-201ENST00000288599 DRAP1Q14919 205 aaPredicted RBP4.28□□□□□ -1.72
NCOA1-201ENST00000288599 C9orf64Q5T6V5 341 aa4.28□□□□□ -1.72
NCOA1-201ENST00000288599 ZNF852Q6ZMS4 543 aa4.28□□□□□ -1.72
NCOA1-201ENST00000288599 DNAAF5Q86Y56 855 aa4.28□□□□□ -1.72
NCOA1-201ENST00000288599 ADGRF2Q8IZF7 708 aa4.28□□□□□ -1.72
NCOA1-201ENST00000288599 LRRC17Q8N6Y2 441 aa4.28□□□□□ -1.72
NCOA1-201ENST00000288599 REPS2Q8NFH8 660 aa4.28□□□□□ -1.72
NCOA1-201ENST00000288599 OR8H1Q8NGG4 311 aa4.28□□□□□ -1.72
NCOA1-201ENST00000288599 PCNPQ8WW12 178 aaKnown RBP4.28□□□□□ -1.72
NCOA1-201ENST00000288599 TIFAQ96CG3 184 aa4.28□□□□□ -1.72
NCOA1-201ENST00000288599 DYNLL2Q96FJ2 89 aa4.28□□□□□ -1.72
NCOA1-201ENST00000288599 TSPAN18Q96SJ8 248 aa4.28□□□□□ -1.72
NCOA1-201ENST00000288599 CMKLR1Q99788 373 aa4.28□□□□□ -1.72
NCOA1-201ENST00000288599 PELOQ9BRX2 385 aaKnown RBP4.28□□□□□ -1.72
NCOA1-201ENST00000288599 MXD3Q9BW11 206 aa4.28□□□□□ -1.72
NCOA1-201ENST00000288599 TMLHEQ9NVH6 421 aa4.28□□□□□ -1.72
NCOA1-201ENST00000288599 P4HTMQ9NXG6 502 aa4.28□□□□□ -1.72
NCOA1-201ENST00000288599 ZMAT5Q9UDW3 170 aaKnown RBP4.28□□□□□ -1.72
NCOA1-201ENST00000288599 PRELID1Q9Y255 219 aa4.28□□□□□ -1.72
NCOA1-201ENST00000288599 ZNF451Q9Y4E5 1061 aa4.28□□□□□ -1.72
NCOA1-201ENST00000288599 FRMPD4Q14CM0 1322 aa4.28□□□□□ -1.72
NCOA1-201ENST00000288599 A0A087X0B3 334 aa4.28□□□□□ -1.72
NCOA1-201ENST00000288599 FUOMA2VDF0 154 aa4.28□□□□□ -1.72
NCOA1-201ENST00000288599 A8MX80 341 aa4.28□□□□□ -1.72
NCOA1-201ENST00000288599 H3BNX3 289 aa4.28□□□□□ -1.72
NCOA1-201ENST00000288599 TRAFD1O14545 582 aaPredicted RBP4.28□□□□□ -1.72
NCOA1-201ENST00000288599 EIF3HO15372 352 aaKnown RBP eCLIP4.28□□□□□ -1.72
NCOA1-201ENST00000288599 CYP26A1O43174 497 aa4.28□□□□□ -1.72
NCOA1-201ENST00000288599 RNF13O43567 381 aa4.28□□□□□ -1.72
NCOA1-201ENST00000288599 UGT2B11O75310 529 aa4.28□□□□□ -1.72
NCOA1-201ENST00000288599 CNIH1O95406 144 aa4.28□□□□□ -1.72
NCOA1-201ENST00000288599 FGF3P11487 239 aaPredicted RBP4.28□□□□□ -1.72
NCOA1-201ENST00000288599 LAMP2P13473 410 aa4.28□□□□□ -1.72
NCOA1-201ENST00000288599 DGKAP23743 735 aa4.28□□□□□ -1.72
NCOA1-201ENST00000288599 TIE1P35590 1138 aa4.28□□□□□ -1.72
NCOA1-201ENST00000288599 GGT2P36268 569 aa4.28□□□□□ -1.72
NCOA1-201ENST00000288599 LIFRP42702 1097 aa4.28□□□□□ -1.72
NCOA1-201ENST00000288599 MGAT5Q09328 741 aa4.28□□□□□ -1.72
NCOA1-201ENST00000288599 LRRC37A5PQ49AS3 106 aa4.28□□□□□ -1.72
NCOA1-201ENST00000288599 SLC39A12Q504Y0 691 aa4.28□□□□□ -1.72
NCOA1-201ENST00000288599 ADGRF1Q5T601 910 aa4.28□□□□□ -1.72
NCOA1-201ENST00000288599 UBAP2Q5T6F2 1119 aaKnown RBP4.28□□□□□ -1.72
NCOA1-201ENST00000288599 SIGIRRQ6IA17 410 aa4.28□□□□□ -1.72
NCOA1-201ENST00000288599 NANOGP8Q6NSW7 305 aa4.28□□□□□ -1.72
NCOA1-201ENST00000288599 FUT10Q6P4F1 479 aa4.28□□□□□ -1.72
NCOA1-201ENST00000288599 CNKSR3Q6P9H4 555 aa4.28□□□□□ -1.72
NCOA1-201ENST00000288599 FRRS1Q6ZNA5 592 aa4.28□□□□□ -1.72
NCOA1-201ENST00000288599 EIF3MQ7L2H7 374 aaKnown RBP4.28□□□□□ -1.72
NCOA1-201ENST00000288599 PTF1AQ7RTS3 328 aa4.28□□□□□ -1.72
NCOA1-201ENST00000288599 PIWIL3Q7Z3Z3 882 aaKnown RBP4.28□□□□□ -1.72
NCOA1-201ENST00000288599 C17orf64Q86WR6 236 aa4.28□□□□□ -1.72
NCOA1-201ENST00000288599 STK40Q8N2I9 435 aa4.28□□□□□ -1.72
NCOA1-201ENST00000288599 FBXO39Q8N4B4 442 aa4.28□□□□□ -1.72
NCOA1-201ENST00000288599 BPIFB6Q8NFQ5 453 aa4.28□□□□□ -1.72
NCOA1-201ENST00000288599 RORBQ92753 470 aa4.28□□□□□ -1.72
NCOA1-201ENST00000288599 GRAMD1AQ96CP6 724 aa4.28□□□□□ -1.72
NCOA1-201ENST00000288599 SLC25A36Q96CQ1 311 aa4.28□□□□□ -1.72
NCOA1-201ENST00000288599 ITPKCQ96DU7 683 aa4.28□□□□□ -1.72
NCOA1-201ENST00000288599 RBM15Q96T37 977 aaKnown RBP eCLIP4.28□□□□□ -1.72
NCOA1-201ENST00000288599 MAPKAP1Q9BPZ7 522 aa4.28□□□□□ -1.72
NCOA1-201ENST00000288599 SH2D3AQ9BRG2 576 aa4.28□□□□□ -1.72
NCOA1-201ENST00000288599 SEMA4CQ9C0C4 833 aa4.28□□□□□ -1.72
NCOA1-201ENST00000288599 ABCG8Q9H221 673 aa4.28□□□□□ -1.72
NCOA1-201ENST00000288599 GJB4Q9NTQ9 266 aa4.28□□□□□ -1.72
NCOA1-201ENST00000288599 CCM2LQ9NUG4 571 aaPredicted RBP4.28□□□□□ -1.72
NCOA1-201ENST00000288599 POLR3BQ9NW08 1133 aaPredicted RBP4.28□□□□□ -1.72
NCOA1-201ENST00000288599 SIRT5Q9NXA8 310 aa4.28□□□□□ -1.72
NCOA1-201ENST00000288599 GDAP2Q9NXN4 497 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms