RNA–Protein interactions for RNA: ENST00000287008.7

PCDH1-201, Transcript of protocadherin 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PCDH1, Length 4,793 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-201ENST00000287008 DMTF1Q9Y222 760 aa18.04■□□□□ 0.48
PCDH1-201ENST00000287008 A8MUI8 341 aa18.04■□□□□ 0.48
PCDH1-201ENST00000287008 STATHP02808 62 aa18.04■□□□□ 0.48
PCDH1-201ENST00000287008 F7P08709 466 aaPredicted RBP18.04■□□□□ 0.48
PCDH1-201ENST00000287008 MYCLP1P12525 358 aaPredicted RBP18.04■□□□□ 0.48
PCDH1-201ENST00000287008 HNF1BP35680 557 aa18.04■□□□□ 0.48
PCDH1-201ENST00000287008 PLGLB1Q02325 96 aa18.04■□□□□ 0.48
PCDH1-201ENST00000287008 ZNF852Q6ZMS4 543 aa18.04■□□□□ 0.48
PCDH1-201ENST00000287008 FAM156AQ8NDB6 213 aa18.04■□□□□ 0.48
PCDH1-201ENST00000287008 MS4A4AQ96JQ5 239 aa18.04■□□□□ 0.48
PCDH1-201ENST00000287008 EBF4Q9BQW3 602 aa18.04■□□□□ 0.48
PCDH1-201ENST00000287008 SMURF2Q9HAU4 748 aa18.04■□□□□ 0.48
PCDH1-201ENST00000287008 LRP6O75581 1613 aa18.04■□□□□ 0.48
PCDH1-201ENST00000287008 JUNP05412 331 aaKnown RBP18.04■□□□□ 0.48
PCDH1-201ENST00000287008 CXCR1P25024 350 aa18.04■□□□□ 0.48
PCDH1-201ENST00000287008 ARCN1P48444 511 aaKnown RBP18.04■□□□□ 0.48
PCDH1-201ENST00000287008 KLF1Q13351 362 aaPredicted RBP18.04■□□□□ 0.48
PCDH1-201ENST00000287008 SCARB2Q14108 478 aa18.04■□□□□ 0.48
PCDH1-201ENST00000287008 ZNF800Q2TB10 664 aaPredicted RBP eCLIP18.04■□□□□ 0.48
PCDH1-201ENST00000287008 RELTQ969Z4 430 aa18.04■□□□□ 0.48
PCDH1-201ENST00000287008 CHID1Q9BWS9 393 aa18.04■□□□□ 0.48
PCDH1-201ENST00000287008 POLR2J3Q9H1A7 115 aaKnown RBP18.04■□□□□ 0.48
PCDH1-201ENST00000287008 NOL6Q9H6R4 1146 aaKnown RBP18.04■□□□□ 0.48
PCDH1-201ENST00000287008 SESN1Q9Y6P5 492 aa18.04■□□□□ 0.48
PCDH1-201ENST00000287008 ENPP2Q13822 863 aa18.04■□□□□ 0.48
PCDH1-201ENST00000287008 TBC1D25Q3MII6 688 aa18.04■□□□□ 0.48
PCDH1-201ENST00000287008 OR4F3Q6IEY1 312 aa18.04■□□□□ 0.48
PCDH1-201ENST00000287008 TCEAL8Q8IYN2 117 aa18.04■□□□□ 0.48
PCDH1-201ENST00000287008 COX4I2Q96KJ9 171 aa18.04■□□□□ 0.48
PCDH1-201ENST00000287008 STRADBQ9C0K7 418 aa18.04■□□□□ 0.48
PCDH1-201ENST00000287008 ZIM2Q9NZV7 527 aa18.04■□□□□ 0.48
PCDH1-201ENST00000287008 GPC6Q9Y625 555 aaPredicted RBP18.04■□□□□ 0.48
PCDH1-201ENST00000287008 PACS2Q86VP3 889 aa18.03■□□□□ 0.48
PCDH1-201ENST00000287008 SVOPLQ8N434 492 aa18.03■□□□□ 0.48
PCDH1-201ENST00000287008 OR4K17Q8NGC6 315 aa18.03■□□□□ 0.48
PCDH1-201ENST00000287008 ZNF570Q96NI8 536 aa18.03■□□□□ 0.48
PCDH1-201ENST00000287008 GINS4Q9BRT9 223 aa18.03■□□□□ 0.48
PCDH1-201ENST00000287008 NEUROD4Q9HD90 331 aa18.03■□□□□ 0.48
PCDH1-201ENST00000287008 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP18.03■□□□□ 0.48
PCDH1-201ENST00000287008 PCDHGA2Q9Y5H1 932 aa18.03■□□□□ 0.48
PCDH1-201ENST00000287008 RSL1D1O76021 490 aaKnown RBP18.03■□□□□ 0.48
PCDH1-201ENST00000287008 CD2P06729 351 aa18.03■□□□□ 0.48
PCDH1-201ENST00000287008 CLCN4P51793 760 aa18.03■□□□□ 0.48
PCDH1-201ENST00000287008 PDX1P52945 283 aa18.03■□□□□ 0.48
PCDH1-201ENST00000287008 ITGADQ13349 1161 aa18.03■□□□□ 0.48
PCDH1-201ENST00000287008 DCTN2Q13561 401 aaKnown RBP18.03■□□□□ 0.48
PCDH1-201ENST00000287008 SLC9B1Q4ZJI4 515 aa18.03■□□□□ 0.48
PCDH1-201ENST00000287008 PYDC2Q56P42 97 aa18.03■□□□□ 0.48
PCDH1-201ENST00000287008 DDX59Q5T1V6 619 aaKnown RBP eCLIP18.03■□□□□ 0.48
PCDH1-201ENST00000287008 IQCHQ86VS3 1027 aa18.03■□□□□ 0.48
PCDH1-201ENST00000287008 TXNDC5Q8NBS9 432 aaKnown RBP18.03■□□□□ 0.48
PCDH1-201ENST00000287008 ZDHHC12Q96GR4 267 aa18.03■□□□□ 0.48
PCDH1-201ENST00000287008 COMMD9Q9P000 198 aa18.03■□□□□ 0.48
PCDH1-201ENST00000287008 ZNF142P52746 1687 aaPredicted RBP18.03■□□□□ 0.48
PCDH1-201ENST00000287008 RNGTTO60942 597 aaKnown RBP18.03■□□□□ 0.48
PCDH1-201ENST00000287008 NTHL1P78549 312 aa18.03■□□□□ 0.48
PCDH1-201ENST00000287008 TMEM126BQ8IUX1 230 aa18.03■□□□□ 0.48
PCDH1-201ENST00000287008 TRAM1L1Q8N609 369 aa18.03■□□□□ 0.48
PCDH1-201ENST00000287008 CDCA3Q99618 268 aaPredicted RBP18.03■□□□□ 0.48
PCDH1-201ENST00000287008 RGS17Q9UGC6 210 aaPredicted RBP18.03■□□□□ 0.48
PCDH1-201ENST00000287008 DHRS7Q9Y394 339 aa18.03■□□□□ 0.48
PCDH1-201ENST00000287008 MANBAO00462 879 aa18.03■□□□□ 0.48
PCDH1-201ENST00000287008 TARDBPQ13148 414 aaKnown RBP eCLIP18.03■□□□□ 0.48
PCDH1-201ENST00000287008 TMEM214Q6NUQ4 689 aaKnown RBP18.03■□□□□ 0.48
PCDH1-201ENST00000287008 GOLGA7Q7Z5G4 137 aa18.03■□□□□ 0.48
PCDH1-201ENST00000287008 SLC22A15Q8IZD6 547 aa18.03■□□□□ 0.48
PCDH1-201ENST00000287008 SDHAF3Q9NRP4 125 aa18.03■□□□□ 0.48
PCDH1-201ENST00000287008 ATXN10Q9UBB4 475 aa18.03■□□□□ 0.48
PCDH1-201ENST00000287008 MED31Q9Y3C7 131 aa18.03■□□□□ 0.48
PCDH1-201ENST00000287008 FOXN2P32314 431 aa18.02■□□□□ 0.48
PCDH1-201ENST00000287008 IL12RB1P42701 662 aa18.02■□□□□ 0.48
PCDH1-201ENST00000287008 CCDC92Q53HC0 331 aaPredicted RBP18.02■□□□□ 0.48
PCDH1-201ENST00000287008 UBAP2Q5T6F2 1119 aaKnown RBP18.02■□□□□ 0.48
PCDH1-201ENST00000287008 LCN1P1Q5VSP4 162 aa18.02■□□□□ 0.48
PCDH1-201ENST00000287008 SORCS1Q8WY21 1168 aa18.02■□□□□ 0.48
PCDH1-201ENST00000287008 SLC25A36Q96CQ1 311 aa18.02■□□□□ 0.48
PCDH1-201ENST00000287008 CA14Q9ULX7 337 aa18.02■□□□□ 0.48
PCDH1-201ENST00000287008 NPC1O15118 1278 aa18.02■□□□□ 0.48
PCDH1-201ENST00000287008 CYB5AP00167 134 aa18.02■□□□□ 0.48
PCDH1-201ENST00000287008 RAP2AP10114 183 aa18.02■□□□□ 0.48
PCDH1-201ENST00000287008 SUOXP51687 545 aa18.02■□□□□ 0.48
PCDH1-201ENST00000287008 DECR1Q16698 335 aa18.02■□□□□ 0.48
PCDH1-201ENST00000287008 MSS51Q4VC12 460 aa18.02■□□□□ 0.48
PCDH1-201ENST00000287008 C15orf39Q6ZRI6 1047 aa18.02■□□□□ 0.48
PCDH1-201ENST00000287008 AHSA2Q719I0 299 aa18.02■□□□□ 0.48
PCDH1-201ENST00000287008 OR5AK3PQ8NH89 298 aa18.02■□□□□ 0.48
PCDH1-201ENST00000287008 CGREF1Q99674 301 aa18.02■□□□□ 0.48
PCDH1-201ENST00000287008 ZDHHC7Q9NXF8 308 aa18.02■□□□□ 0.48
PCDH1-201ENST00000287008 ZNF726A6NNF4 738 aa18.02■□□□□ 0.47
PCDH1-201ENST00000287008 SCDO00767 359 aa18.02■□□□□ 0.47
PCDH1-201ENST00000287008 ANXA8P13928 327 aa18.02■□□□□ 0.47
PCDH1-201ENST00000287008 C1orf61Q13536 156 aa18.02■□□□□ 0.47
PCDH1-201ENST00000287008 TICAM1Q8IUC6 712 aa18.02■□□□□ 0.47
PCDH1-201ENST00000287008 C2CD4AQ8NCU7 369 aaPredicted RBP18.02■□□□□ 0.47
PCDH1-201ENST00000287008 HIST1H2AAQ96QV6 131 aa18.02■□□□□ 0.47
PCDH1-201ENST00000287008 ABCB10Q9NRK6 738 aa18.02■□□□□ 0.47
PCDH1-201ENST00000287008 FZD4Q9ULV1 537 aa18.02■□□□□ 0.47
PCDH1-201ENST00000287008 KHDRBS3O75525 346 aaKnown RBP18.02■□□□□ 0.47
PCDH1-201ENST00000287008 GNALP38405 381 aa18.02■□□□□ 0.47
PCDH1-201ENST00000287008 DNASE1L1P49184 302 aa18.02■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms