RNA–Protein interactions for RNA: ENST00000283254.11

SCN3A-201, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN3A, Length 9,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-201ENST00000283254 DNAJC19Q96DA6 116 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 COPS4Q9BT78 406 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 B3GNT4Q9C0J1 378 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 RABL2AQ9UBK7 228 aaPredicted RBP3.97□□□□□ -1.77
SCN3A-201ENST00000283254 FKBPLQ9UIM3 349 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 RABL2BQ9UNT1 228 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 KCNIP3Q9Y2W7 256 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 LAMTOR5O43504 91 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 C9P02748 559 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 RPLP0P05388 317 aaKnown RBP3.97□□□□□ -1.77
SCN3A-201ENST00000283254 GSTM2P28161 218 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 TNFSF9P41273 254 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 MAGEA11P43364 429 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 AKR1D1P51857 326 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 TARDBPQ13148 414 aaKnown RBP eCLIP3.97□□□□□ -1.77
SCN3A-201ENST00000283254 SEMA5AQ13591 1074 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 TREML2Q5T2D2 321 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 UBAP2Q5T6F2 1119 aaKnown RBP3.97□□□□□ -1.77
SCN3A-201ENST00000283254 DRICH1Q6PGQ1 229 aaPredicted RBP3.97□□□□□ -1.77
SCN3A-201ENST00000283254 SHQ1Q6PI26 577 aaKnown RBP3.97□□□□□ -1.77
SCN3A-201ENST00000283254 ZNF783Q6ZMS7 281 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 CMC1Q7Z7K0 106 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 TAC4Q86UU9 113 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 ZNF100Q8IYN0 542 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 ZNF101Q8IZC7 436 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 CFAP52Q8N1V2 620 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 ARL14EPQ8N8R7 260 aaPredicted RBP3.97□□□□□ -1.77
SCN3A-201ENST00000283254 DCAF4L2Q8NA75 395 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 MINDY2Q8NBR6 621 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 GSTCDQ8NEC7 633 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 BPIFB1Q8TDL5 484 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 PPP1R13LQ8WUF5 828 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 SUSD3Q96L08 255 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 ZNF570Q96NI8 536 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 NELL2Q99435 816 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 MAPKAP1Q9BPZ7 522 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 UCK2Q9BZX2 261 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 MVB12BQ9H7P6 319 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 PNO1Q9NRX1 252 aaKnown RBP3.97□□□□□ -1.77
SCN3A-201ENST00000283254 ZFP57Q9NU63 452 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 TNFRSF10DQ9UBN6 386 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 GPR160Q9UJ42 338 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 FER1L4A9Z1Z3 1794 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 IRS2Q9Y4H2 1338 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP3.97□□□□□ -1.77
SCN3A-201ENST00000283254 KANTRA0A1W2PQU2 76 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 CPSF4LA6NMK7 179 aaKnown RBP3.97□□□□□ -1.77
SCN3A-201ENST00000283254 CXCR6O00574 342 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 LPLP06858 475 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 HCKP08631 526 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 RBMXP38159 391 aaKnown RBP3.97□□□□□ -1.77
SCN3A-201ENST00000283254 EFR3AQ14156 821 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 USP43Q70EL4 1123 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 LIX1LQ8IVB5 337 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 FUKQ8N0W3 1084 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 YIPF7Q8N8F6 280 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 PPP1R14BQ96C90 147 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 PIWIL1Q96J94 861 aaKnown RBP3.97□□□□□ -1.77
SCN3A-201ENST00000283254 KCTD15Q96SI1 283 aaPredicted RBP3.97□□□□□ -1.77
SCN3A-201ENST00000283254 ZNF471Q9BX82 626 aaPredicted RBP3.97□□□□□ -1.77
SCN3A-201ENST00000283254 FAM120CQ9NX05 1096 aaKnown RBP3.97□□□□□ -1.77
SCN3A-201ENST00000283254 ABCD2Q9UBJ2 740 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 VPS29Q9UBQ0 182 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 PRKAB1Q9Y478 270 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 MAFBQ9Y5Q3 323 aaPredicted RBP3.97□□□□□ -1.77
SCN3A-201ENST00000283254 BCL9LQ86UU0 1499 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 INTS1Q8N201 2190 aaKnown RBP3.97□□□□□ -1.77
SCN3A-201ENST00000283254 A0A0G2JPF8 293 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 HNRNPCL3B7ZW38 293 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 KCNJ13O60928 360 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 ABCB7O75027 752 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 IFNA7P01567 189 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 GALTP07902 379 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 GSTT2P0CG29 244 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 HNRNPCL4P0DMR1 293 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 RAP2AP10114 183 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 BMP8BP34820 402 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 CLCN4P51793 760 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 CLCNKBP51801 687 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 EEFSECP57772 596 aaKnown RBP3.97□□□□□ -1.77
SCN3A-201ENST00000283254 IRF5Q13568 498 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 SLBPQ14493 270 aaKnown RBP eCLIP3.97□□□□□ -1.77
SCN3A-201ENST00000283254 CRTC2Q53ET0 693 aaPredicted RBP3.97□□□□□ -1.77
SCN3A-201ENST00000283254 CRB2Q5IJ48 1285 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 C22orf39Q6P5X5 142 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 TUBA3EQ6PEY2 450 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 ZNF550Q7Z398 422 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 BMP8AQ7Z5Y6 402 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 JAGN1Q8N5M9 183 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 OR7D4Q8NG98 312 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 THAP6Q8TBB0 222 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 HAVCR2Q8TDQ0 301 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 PCED1BQ96HM7 432 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 CEP295NLQ96MC4 621 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 WDR92Q96MX6 357 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 CPXM1Q96SM3 734 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 P2RY13Q9BPV8 354 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 DNTTIP1Q9H147 329 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 SYT4Q9H2B2 425 aa3.97□□□□□ -1.77
SCN3A-201ENST00000283254 SMOC2Q9H3U7 446 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms