RNA–Protein interactions for RNA: ENST00000275036.11

HMGN3-201, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 1 (best) BASIC

Gene HMGN3, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-201ENST00000275036 PSAT1Q9Y617 370 aa13.8□□□□□ -0.2
HMGN3-201ENST00000275036 A0A1B0GX78 115 aa13.79□□□□□ -0.2
HMGN3-201ENST00000275036 DSCR3O14972 297 aa13.79□□□□□ -0.2
HMGN3-201ENST00000275036 RAD51CO43502 376 aa13.79□□□□□ -0.2
HMGN3-201ENST00000275036 ZBTB14O43829 449 aa13.79□□□□□ -0.2
HMGN3-201ENST00000275036 SRPX2O60687 465 aaPredicted RBP13.79□□□□□ -0.2
HMGN3-201ENST00000275036 TSPAN12O95859 305 aa13.79□□□□□ -0.2
HMGN3-201ENST00000275036 ONECUT2O95948 504 aa13.79□□□□□ -0.2
HMGN3-201ENST00000275036 UMODP07911 640 aa13.79□□□□□ -0.2
HMGN3-201ENST00000275036 OTX2P32243 289 aa13.79□□□□□ -0.2
HMGN3-201ENST00000275036 ARSFP54793 590 aa13.79□□□□□ -0.2
HMGN3-201ENST00000275036 ETF1P62495 437 aaKnown RBP13.79□□□□□ -0.2
HMGN3-201ENST00000275036 PRDX1Q06830 199 aaKnown RBP13.79□□□□□ -0.2
HMGN3-201ENST00000275036 PDIA2Q13087 525 aaKnown RBP13.79□□□□□ -0.2
HMGN3-201ENST00000275036 FRG1Q14331 258 aaKnown RBP13.79□□□□□ -0.2
HMGN3-201ENST00000275036 GRM7Q14831 915 aa13.79□□□□□ -0.2
HMGN3-201ENST00000275036 NADK2Q4G0N4 442 aa13.79□□□□□ -0.2
HMGN3-201ENST00000275036 ZNF425Q6IV72 752 aa13.79□□□□□ -0.2
HMGN3-201ENST00000275036 UGT3A1Q6NUS8 523 aa13.79□□□□□ -0.2
HMGN3-201ENST00000275036 SYT10Q6XYQ8 523 aa13.79□□□□□ -0.2
HMGN3-201ENST00000275036 MRGPREQ86SM8 312 aa13.79□□□□□ -0.2
HMGN3-201ENST00000275036 METTL27Q8N6F8 245 aaPredicted RBP13.79□□□□□ -0.2
HMGN3-201ENST00000275036 FBXO36Q8NEA4 188 aa13.79□□□□□ -0.2
HMGN3-201ENST00000275036 MIB2Q96AX9 1013 aa13.79□□□□□ -0.2
HMGN3-201ENST00000275036 OLFM1Q99784 485 aa13.79□□□□□ -0.2
HMGN3-201ENST00000275036 ZFYVE21Q9BQ24 234 aa13.79□□□□□ -0.2
HMGN3-201ENST00000275036 C17orf62Q9BQA9 187 aa13.79□□□□□ -0.2
HMGN3-201ENST00000275036 PLCD4Q9BRC7 762 aa13.79□□□□□ -0.2
HMGN3-201ENST00000275036 SLC25A23Q9BV35 468 aa13.79□□□□□ -0.2
HMGN3-201ENST00000275036 DPH5Q9H2P9 285 aa13.79□□□□□ -0.2
HMGN3-201ENST00000275036 ABCF3Q9NUQ8 709 aa13.79□□□□□ -0.2
HMGN3-201ENST00000275036 CUEDC1Q9NWM3 386 aaPredicted RBP13.79□□□□□ -0.2
HMGN3-201ENST00000275036 STOX2Q9P2F5 926 aaPredicted RBP13.79□□□□□ -0.2
HMGN3-201ENST00000275036 NDOR1Q9UHB4 597 aa13.79□□□□□ -0.2
HMGN3-201ENST00000275036 GPN3Q9UHW5 284 aaPredicted RBP13.79□□□□□ -0.2
HMGN3-201ENST00000275036 PDE10AQ9Y233 779 aa13.79□□□□□ -0.2
HMGN3-201ENST00000275036 PTRH2Q9Y3E5 179 aaKnown RBP13.79□□□□□ -0.2
HMGN3-201ENST00000275036 PTPN13Q12923 2485 aa13.79□□□□□ -0.2
HMGN3-201ENST00000275036 RP1L1Q8IWN7 2480 aaPredicted RBP13.79□□□□□ -0.2
HMGN3-201ENST00000275036 H0YGG7 62 aa13.78□□□□□ -0.2
HMGN3-201ENST00000275036 FDXRP22570 491 aa13.78□□□□□ -0.2
HMGN3-201ENST00000275036 CASQ1P31415 396 aa13.78□□□□□ -0.2
HMGN3-201ENST00000275036 HSD17B2P37059 387 aa13.78□□□□□ -0.2
HMGN3-201ENST00000275036 OR1D4P47884 311 aa13.78□□□□□ -0.2
HMGN3-201ENST00000275036 ARF3P61204 181 aaPredicted RBP13.78□□□□□ -0.2
HMGN3-201ENST00000275036 SRSF1Q07955 248 aaKnown RBP eCLIP13.78□□□□□ -0.2
HMGN3-201ENST00000275036 CBLBQ13191 982 aa13.78□□□□□ -0.2
HMGN3-201ENST00000275036 RAPSNQ13702 412 aa13.78□□□□□ -0.2
HMGN3-201ENST00000275036 PHKG1Q16816 387 aa13.78□□□□□ -0.2
HMGN3-201ENST00000275036 HECTD2Q5U5R9 776 aa13.78□□□□□ -0.2
HMGN3-201ENST00000275036 PPP1R32Q7Z5V6 425 aa13.78□□□□□ -0.2
HMGN3-201ENST00000275036 GPATCH11Q8N954 259 aa13.78□□□□□ -0.2
HMGN3-201ENST00000275036 TTC29Q8NA56 475 aaPredicted RBP13.78□□□□□ -0.2
HMGN3-201ENST00000275036 TEX19Q8NA77 164 aa13.78□□□□□ -0.2
HMGN3-201ENST00000275036 OR2Y1Q8NGV0 311 aa13.78□□□□□ -0.2
HMGN3-201ENST00000275036 GABPB2Q8TAK5 448 aaPredicted RBP13.78□□□□□ -0.2
HMGN3-201ENST00000275036 LINGO1Q96FE5 620 aa13.78□□□□□ -0.2
HMGN3-201ENST00000275036 C10orf90Q96M02 699 aa13.78□□□□□ -0.2
HMGN3-201ENST00000275036 ERP44Q9BS26 406 aa13.78□□□□□ -0.2
HMGN3-201ENST00000275036 MOCS1Q9NZB8 636 aa13.78□□□□□ -0.2
HMGN3-201ENST00000275036 GRHL1Q9NZI5 618 aa13.78□□□□□ -0.2
HMGN3-201ENST00000275036 ANKMY1Q9P2S6 941 aa13.78□□□□□ -0.2
HMGN3-201ENST00000275036 SH2B3Q9UQQ2 575 aa13.78□□□□□ -0.2
HMGN3-201ENST00000275036 PADI2Q9Y2J8 665 aa13.78□□□□□ -0.2
HMGN3-201ENST00000275036 SCN2AQ99250 2005 aa13.78□□□□□ -0.2
HMGN3-201ENST00000275036 HYKKA2RU49 373 aa13.77□□□□□ -0.21
HMGN3-201ENST00000275036 FAM187AA6NFU0 413 aa13.77□□□□□ -0.21
HMGN3-201ENST00000275036 A6NL46 340 aa13.77□□□□□ -0.21
HMGN3-201ENST00000275036 ZNF839A8K0R7 811 aa13.77□□□□□ -0.21
HMGN3-201ENST00000275036 HAT1O14929 419 aa13.77□□□□□ -0.21
HMGN3-201ENST00000275036 PIAS1O75925 651 aa13.77□□□□□ -0.21
HMGN3-201ENST00000275036 EIF2S1P05198 315 aaKnown RBP13.77□□□□□ -0.21
HMGN3-201ENST00000275036 FOLR3P41439 243 aa13.77□□□□□ -0.21
HMGN3-201ENST00000275036 RGS4P49798 205 aa13.77□□□□□ -0.21
HMGN3-201ENST00000275036 PGDP52209 483 aa13.77□□□□□ -0.21
HMGN3-201ENST00000275036 TBPL1P62380 186 aa13.77□□□□□ -0.21
HMGN3-201ENST00000275036 SSPNQ14714 243 aa13.77□□□□□ -0.21
HMGN3-201ENST00000275036 ZXDCQ2QGD7 858 aaPredicted RBP13.77□□□□□ -0.21
HMGN3-201ENST00000275036 HKDC1Q2TB90 917 aa13.77□□□□□ -0.21
HMGN3-201ENST00000275036 PRTGQ2VWP7 1150 aa13.77□□□□□ -0.21
HMGN3-201ENST00000275036 YOD1Q5VVQ6 348 aaPredicted RBP13.77□□□□□ -0.21
HMGN3-201ENST00000275036 DUPD1Q68J44 220 aa13.77□□□□□ -0.21
HMGN3-201ENST00000275036 LRRC8EQ6NSJ5 796 aa13.77□□□□□ -0.21
HMGN3-201ENST00000275036 TMEM207Q6UWW9 146 aa13.77□□□□□ -0.21
HMGN3-201ENST00000275036 OVCH1Q7RTY7 1134 aa13.77□□□□□ -0.21
HMGN3-201ENST00000275036 RAB43Q86YS6 212 aa13.77□□□□□ -0.21
HMGN3-201ENST00000275036 PLD3Q8IV08 490 aa13.77□□□□□ -0.21
HMGN3-201ENST00000275036 ZBED8Q8IZ13 594 aa13.77□□□□□ -0.21
HMGN3-201ENST00000275036 FKBP10Q96AY3 582 aa13.77□□□□□ -0.21
HMGN3-201ENST00000275036 OR2A5Q96R48 311 aa13.77□□□□□ -0.21
HMGN3-201ENST00000275036 SPSB2Q99619 263 aa13.77□□□□□ -0.21
HMGN3-201ENST00000275036 MESP1Q9BRJ9 268 aa13.77□□□□□ -0.21
HMGN3-201ENST00000275036 SMYD2Q9NRG4 433 aa13.77□□□□□ -0.21
HMGN3-201ENST00000275036 CTSFQ9UBX1 484 aa13.77□□□□□ -0.21
HMGN3-201ENST00000275036 IKZF3Q9UKT9 509 aa13.77□□□□□ -0.21
HMGN3-201ENST00000275036 VWA7Q9Y334 891 aa13.77□□□□□ -0.21
HMGN3-201ENST00000275036 MAU2Q9Y6X3 613 aa13.77□□□□□ -0.21
HMGN3-201ENST00000275036 SHANK1Q9Y566 2161 aa13.76□□□□□ -0.21
HMGN3-201ENST00000275036 P2RX6O15547 441 aa13.76□□□□□ -0.21
HMGN3-201ENST00000275036 SORBS2O94875 1100 aaKnown RBP13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms