RNA–Protein interactions for RNA: ENST00000262544.6

SEC23B-201, Transcript of Sec23 homolog B, coat complex II component, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SEC23B, Length 3,176 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23B-201ENST00000262544 EPS8Q12929 822 aa12.57□□□□□ -0.4
SEC23B-201ENST00000262544 MAD2L1Q13257 205 aaPredicted RBP12.57□□□□□ -0.4
SEC23B-201ENST00000262544 GANABQ14697 944 aaKnown RBP12.57□□□□□ -0.4
SEC23B-201ENST00000262544 CRTC1Q6UUV9 634 aa12.57□□□□□ -0.4
SEC23B-201ENST00000262544 HMGN2P46Q86SG4 172 aa12.57□□□□□ -0.4
SEC23B-201ENST00000262544 NLGN4XQ8N0W4 816 aa12.57□□□□□ -0.4
SEC23B-201ENST00000262544 LEMD2Q8NC56 503 aa12.57□□□□□ -0.4
SEC23B-201ENST00000262544 CHST14Q8NCH0 376 aa12.57□□□□□ -0.4
SEC23B-201ENST00000262544 HDAC2Q92769 488 aaKnown RBP12.57□□□□□ -0.4
SEC23B-201ENST00000262544 SPATA17Q96L03 361 aa12.57□□□□□ -0.4
SEC23B-201ENST00000262544 DACH2Q96NX9 599 aa12.57□□□□□ -0.4
SEC23B-201ENST00000262544 ASPSCR1Q9BZE9 553 aa12.57□□□□□ -0.4
SEC23B-201ENST00000262544 TAS2R16Q9NYV7 291 aa12.57□□□□□ -0.4
SEC23B-201ENST00000262544 TMEFF2Q9UIK5 374 aaPredicted RBP12.57□□□□□ -0.4
SEC23B-201ENST00000262544 TMED5Q9Y3A6 229 aa12.57□□□□□ -0.4
SEC23B-201ENST00000262544 SOBPA7XYQ1 873 aa12.56□□□□□ -0.4
SEC23B-201ENST00000262544 SCELO95171 688 aa12.56□□□□□ -0.4
SEC23B-201ENST00000262544 EPN2O95208 641 aa12.56□□□□□ -0.4
SEC23B-201ENST00000262544 SERPINA4P29622 427 aa12.56□□□□□ -0.4
SEC23B-201ENST00000262544 HPCAL1P37235 193 aa12.56□□□□□ -0.4
SEC23B-201ENST00000262544 NKX2-5P52952 324 aaPredicted RBP12.56□□□□□ -0.4
SEC23B-201ENST00000262544 ACSM2AQ08AH3 577 aa12.56□□□□□ -0.4
SEC23B-201ENST00000262544 STARD3Q14849 445 aa12.56□□□□□ -0.4
SEC23B-201ENST00000262544 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.56□□□□□ -0.4
SEC23B-201ENST00000262544 GPRC6AQ5T6X5 926 aa12.56□□□□□ -0.4
SEC23B-201ENST00000262544 CPZQ66K79 652 aa12.56□□□□□ -0.4
SEC23B-201ENST00000262544 ACSM2BQ68CK6 577 aa12.56□□□□□ -0.4
SEC23B-201ENST00000262544 OR2T5Q6IEZ7 315 aa12.56□□□□□ -0.4
SEC23B-201ENST00000262544 NOXRED1Q6NXP6 359 aa12.56□□□□□ -0.4
SEC23B-201ENST00000262544 P2RY8Q86VZ1 359 aa12.56□□□□□ -0.4
SEC23B-201ENST00000262544 SYTL1Q8IYJ3 562 aa12.56□□□□□ -0.4
SEC23B-201ENST00000262544 OR2T29Q8NH02 315 aa12.56□□□□□ -0.4
SEC23B-201ENST00000262544 TMEM169Q96HH4 297 aa12.56□□□□□ -0.4
SEC23B-201ENST00000262544 SH3YL1Q96HL8 342 aaPredicted RBP12.56□□□□□ -0.4
SEC23B-201ENST00000262544 C1QTNF3Q9BXJ4 246 aa12.56□□□□□ -0.4
SEC23B-201ENST00000262544 SLC32A1Q9H598 525 aa12.56□□□□□ -0.4
SEC23B-201ENST00000262544 REEP1Q9H902 201 aa12.56□□□□□ -0.4
SEC23B-201ENST00000262544 MAGEE1Q9HCI5 957 aa12.56□□□□□ -0.4
SEC23B-201ENST00000262544 ZNF334Q9HCZ1 680 aaPredicted RBP12.56□□□□□ -0.4
SEC23B-201ENST00000262544 INPPL1O15357 1258 aa12.56□□□□□ -0.4
SEC23B-201ENST00000262544 CPNE6O95741 557 aa12.56□□□□□ -0.4
SEC23B-201ENST00000262544 SELPP16109 830 aa12.56□□□□□ -0.4
SEC23B-201ENST00000262544 CD36P16671 472 aa12.56□□□□□ -0.4
SEC23B-201ENST00000262544 LHCGRP22888 699 aa12.56□□□□□ -0.4
SEC23B-201ENST00000262544 SOAT1P35610 550 aa12.56□□□□□ -0.4
SEC23B-201ENST00000262544 CREMQ03060 361 aa12.56□□□□□ -0.4
SEC23B-201ENST00000262544 RBM48Q5RL73 367 aaKnown RBP12.56□□□□□ -0.4
SEC23B-201ENST00000262544 ALG1LQ6GMV1 187 aa12.56□□□□□ -0.4
SEC23B-201ENST00000262544 SLC16A12Q6ZSM3 486 aa12.56□□□□□ -0.4
SEC23B-201ENST00000262544 Q6ZVL8 140 aa12.56□□□□□ -0.4
SEC23B-201ENST00000262544 CHPT1Q8WUD6 406 aa12.56□□□□□ -0.4
SEC23B-201ENST00000262544 FATE1Q969F0 183 aa12.56□□□□□ -0.4
SEC23B-201ENST00000262544 GTPBP3Q969Y2 492 aaKnown RBP12.56□□□□□ -0.4
SEC23B-201ENST00000262544 GORASP2Q9H8Y8 452 aa12.56□□□□□ -0.4
SEC23B-201ENST00000262544 ZDHHC4Q9NPG8 344 aa12.56□□□□□ -0.4
SEC23B-201ENST00000262544 THG1LQ9NWX6 298 aaKnown RBP12.56□□□□□ -0.4
SEC23B-201ENST00000262544 KIAA1522Q9P206 1035 aaPredicted RBP12.56□□□□□ -0.4
SEC23B-201ENST00000262544 ITGB1BP2Q9UKP3 347 aa12.56□□□□□ -0.4
SEC23B-201ENST00000262544 SNX6Q9UNH7 406 aa12.56□□□□□ -0.4
SEC23B-201ENST00000262544 ERVK-11Q9UQG0 969 aa12.56□□□□□ -0.4
SEC23B-201ENST00000262544 FAM32AQ9Y421 112 aaKnown RBP12.56□□□□□ -0.4
SEC23B-201ENST00000262544 TBX1O43435 398 aa12.55□□□□□ -0.4
SEC23B-201ENST00000262544 PRAMEF4O60810 478 aa12.55□□□□□ -0.4
SEC23B-201ENST00000262544 DNTTP04053 509 aa12.55□□□□□ -0.4
SEC23B-201ENST00000262544 FABP3P05413 133 aa12.55□□□□□ -0.4
SEC23B-201ENST00000262544 EBLN1P0CF75 366 aa12.55□□□□□ -0.4
SEC23B-201ENST00000262544 CLK3P49761 638 aaKnown RBP12.55□□□□□ -0.4
SEC23B-201ENST00000262544 DMC1Q14565 340 aa12.55□□□□□ -0.4
SEC23B-201ENST00000262544 COLEC12Q5KU26 742 aa12.55□□□□□ -0.4
SEC23B-201ENST00000262544 PRAMEF9Q5VWM5 478 aa12.55□□□□□ -0.4
SEC23B-201ENST00000262544 CCSAPQ6IQ19 270 aaPredicted RBP12.55□□□□□ -0.4
SEC23B-201ENST00000262544 DPY19L3Q6ZPD9 716 aa12.55□□□□□ -0.4
SEC23B-201ENST00000262544 NPAS4Q8IUM7 802 aa12.55□□□□□ -0.4
SEC23B-201ENST00000262544 ADAMTS16Q8TE57 1224 aa12.55□□□□□ -0.4
SEC23B-201ENST00000262544 CYB5D2Q8WUJ1 264 aa12.55□□□□□ -0.4
SEC23B-201ENST00000262544 SERHLQ9NQF3 203 aa12.55□□□□□ -0.4
SEC23B-201ENST00000262544 SIRT5Q9NXA8 310 aa12.55□□□□□ -0.4
SEC23B-201ENST00000262544 THUMPD1Q9NXG2 353 aaKnown RBP12.55□□□□□ -0.4
SEC23B-201ENST00000262544 SPASTQ9UBP0 616 aa12.55□□□□□ -0.4
SEC23B-201ENST00000262544 ZNF639Q9UID6 485 aa12.55□□□□□ -0.4
SEC23B-201ENST00000262544 PNMA8CA0A1B0GUJ8 204 aa12.55□□□□□ -0.4
SEC23B-201ENST00000262544 KRBA1A5PL33 1030 aa12.55□□□□□ -0.4
SEC23B-201ENST00000262544 TRIM64CA6NLI5 447 aa12.55□□□□□ -0.4
SEC23B-201ENST00000262544 MAGEB17A8MXT2 336 aa12.55□□□□□ -0.4
SEC23B-201ENST00000262544 E7EQ34 232 aa12.55□□□□□ -0.4
SEC23B-201ENST00000262544 NEDD8-MDP1E9PL57 170 aa12.55□□□□□ -0.4
SEC23B-201ENST00000262544 CA12O43570 354 aa12.55□□□□□ -0.4
SEC23B-201ENST00000262544 IGSF6O95976 241 aa12.55□□□□□ -0.4
SEC23B-201ENST00000262544 EPORP19235 508 aa12.55□□□□□ -0.4
SEC23B-201ENST00000262544 RRM2P31350 389 aa12.55□□□□□ -0.4
SEC23B-201ENST00000262544 BDKRB1P46663 353 aa12.55□□□□□ -0.4
SEC23B-201ENST00000262544 ST13P50502 369 aaKnown RBP12.55□□□□□ -0.4
SEC23B-201ENST00000262544 RPS3AP61247 264 aaKnown RBP12.55□□□□□ -0.4
SEC23B-201ENST00000262544 NIPAL1Q6NVV3 410 aa12.55□□□□□ -0.4
SEC23B-201ENST00000262544 TRAF7Q6Q0C0 670 aa12.55□□□□□ -0.4
SEC23B-201ENST00000262544 GOLM1Q8NBJ4 401 aa12.55□□□□□ -0.4
SEC23B-201ENST00000262544 HJURPQ8NCD3 748 aaPredicted RBP12.55□□□□□ -0.4
SEC23B-201ENST00000262544 ZNF461Q8TAF7 563 aa12.55□□□□□ -0.4
SEC23B-201ENST00000262544 FAR1Q8WVX9 515 aa12.55□□□□□ -0.4
SEC23B-201ENST00000262544 PLD4Q96BZ4 506 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms