RNA–Protein interactions for RNA: ENST00000259043.11

TRA2B-201, Transcript of transformer 2 beta homolog, humanhuman

TSL 3

Gene TRA2B, Length 943 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-201ENST00000259043 ARSEP51690 589 aa4.53□□□□□ -1.68
TRA2B-201ENST00000259043 TIMM10P62072 90 aa4.53□□□□□ -1.68
TRA2B-201ENST00000259043 EEF1A1P68104 462 aaKnown RBP4.53□□□□□ -1.68
TRA2B-201ENST00000259043 KRT83P78385 493 aa4.53□□□□□ -1.68
TRA2B-201ENST00000259043 RPL24P83731 157 aaKnown RBP4.53□□□□□ -1.68
TRA2B-201ENST00000259043 TFCP2Q12800 502 aa4.53□□□□□ -1.68
TRA2B-201ENST00000259043 SNTB1Q13884 538 aaKnown RBP4.53□□□□□ -1.68
TRA2B-201ENST00000259043 COG2Q14746 738 aa4.53□□□□□ -1.68
TRA2B-201ENST00000259043 IGSF11Q5DX21 431 aa4.53□□□□□ -1.68
TRA2B-201ENST00000259043 DCST1Q5T197 706 aa4.53□□□□□ -1.68
TRA2B-201ENST00000259043 C1QTNF12Q5T7M4 302 aa4.53□□□□□ -1.68
TRA2B-201ENST00000259043 EEF1A1P5Q5VTE0 462 aa4.53□□□□□ -1.68
TRA2B-201ENST00000259043 LCN10Q6JVE6 187 aa4.53□□□□□ -1.68
TRA2B-201ENST00000259043 TATDN1Q6P1N9 297 aa4.53□□□□□ -1.68
TRA2B-201ENST00000259043 GALNTL5Q7Z4T8 443 aa4.53□□□□□ -1.68
TRA2B-201ENST00000259043 GALNT13Q8IUC8 556 aa4.53□□□□□ -1.68
TRA2B-201ENST00000259043 OR8K5Q8NH50 307 aa4.53□□□□□ -1.68
TRA2B-201ENST00000259043 SLC38A5Q8WUX1 472 aa4.53□□□□□ -1.68
TRA2B-201ENST00000259043 ZNF583Q96ND8 569 aa4.53□□□□□ -1.68
TRA2B-201ENST00000259043 DGAT2Q96PD7 388 aa4.53□□□□□ -1.68
TRA2B-201ENST00000259043 NEURL2Q9BR09 285 aa4.53□□□□□ -1.68
TRA2B-201ENST00000259043 POLR3CQ9BUI4 534 aaPredicted RBP4.53□□□□□ -1.68
TRA2B-201ENST00000259043 CCDC106Q9BWC9 280 aa4.53□□□□□ -1.68
TRA2B-201ENST00000259043 SPATC1LQ9H0A9 340 aa4.53□□□□□ -1.68
TRA2B-201ENST00000259043 MTIF3Q9H2K0 278 aaKnown RBP4.53□□□□□ -1.68
TRA2B-201ENST00000259043 RPAP3Q9H6T3 665 aaPredicted RBP4.53□□□□□ -1.68
TRA2B-201ENST00000259043 ZNF696Q9H7X3 374 aa4.53□□□□□ -1.68
TRA2B-201ENST00000259043 PFDN4Q9NQP4 134 aa4.53□□□□□ -1.68
TRA2B-201ENST00000259043 ARGLU1Q9NWB6 273 aaPredicted RBP4.53□□□□□ -1.68
TRA2B-201ENST00000259043 HMG20BQ9P0W2 317 aa4.53□□□□□ -1.68
TRA2B-201ENST00000259043 ANAPC2Q9UJX6 822 aa4.53□□□□□ -1.68
TRA2B-201ENST00000259043 PA2G4Q9UQ80 394 aaKnown RBP4.53□□□□□ -1.68
TRA2B-201ENST00000259043 VPS13AQ96RL7 3174 aa4.53□□□□□ -1.68
TRA2B-201ENST00000259043 KMT2BQ9UMN6 2715 aaPredicted RBP4.53□□□□□ -1.68
TRA2B-201ENST00000259043 ZNF292O60281 2723 aa4.52□□□□□ -1.69
TRA2B-201ENST00000259043 DCHS1Q96JQ0 3298 aa4.52□□□□□ -1.69
TRA2B-201ENST00000259043 RIF1Q5UIP0 2472 aaKnown RBP4.52□□□□□ -1.69
TRA2B-201ENST00000259043 MROH7Q68CQ1 1323 aa4.52□□□□□ -1.69
TRA2B-201ENST00000259043 FAM186AA6NE01 2351 aa4.52□□□□□ -1.69
TRA2B-201ENST00000259043 A0A1W2PP11 408 aa4.52□□□□□ -1.69
TRA2B-201ENST00000259043 KANSL1LA0AUZ9 987 aa4.52□□□□□ -1.69
TRA2B-201ENST00000259043 C1orf226A1L170 272 aa4.52□□□□□ -1.69
TRA2B-201ENST00000259043 FAM90A26D6RGX4 464 aa4.52□□□□□ -1.69
TRA2B-201ENST00000259043 ADAMDEC1O15204 470 aa4.52□□□□□ -1.69
TRA2B-201ENST00000259043 ZG16O60844 167 aa4.52□□□□□ -1.69
TRA2B-201ENST00000259043 SNAI1O95863 264 aaPredicted RBP4.52□□□□□ -1.69
TRA2B-201ENST00000259043 PGK2P07205 417 aa4.52□□□□□ -1.69
TRA2B-201ENST00000259043 VDRP11473 427 aa4.52□□□□□ -1.69
TRA2B-201ENST00000259043 UGT1A1P22309 533 aa4.52□□□□□ -1.69
TRA2B-201ENST00000259043 UBA1P22314 1058 aaKnown RBP4.52□□□□□ -1.69
TRA2B-201ENST00000259043 ACADLP28330 430 aa4.52□□□□□ -1.69
TRA2B-201ENST00000259043 DCTP40126 519 aa4.52□□□□□ -1.69
TRA2B-201ENST00000259043 ZNF41P51814 821 aaPredicted RBP4.52□□□□□ -1.69
TRA2B-201ENST00000259043 PPP5CP53041 499 aa4.52□□□□□ -1.69
TRA2B-201ENST00000259043 ALCAMQ13740 583 aa4.52□□□□□ -1.69
TRA2B-201ENST00000259043 CCDC6Q16204 474 aa4.52□□□□□ -1.69
TRA2B-201ENST00000259043 PNLIPRP3Q17RR3 467 aa4.52□□□□□ -1.69
TRA2B-201ENST00000259043 SIRPB2Q5JXA9 342 aa4.52□□□□□ -1.69
TRA2B-201ENST00000259043 CEP85LQ5SZL2 805 aa4.52□□□□□ -1.69
TRA2B-201ENST00000259043 CCNYL2Q5T2Q4 361 aa4.52□□□□□ -1.69
TRA2B-201ENST00000259043 PDSS1Q5T2R2 415 aa4.52□□□□□ -1.69
TRA2B-201ENST00000259043 LRIF1Q5T3J3 769 aa4.52□□□□□ -1.69
TRA2B-201ENST00000259043 FAM171BQ6P995 826 aa4.52□□□□□ -1.69
TRA2B-201ENST00000259043 IL27RAQ6UWB1 636 aa4.52□□□□□ -1.69
TRA2B-201ENST00000259043 TSPAN14Q8NG11 270 aa4.52□□□□□ -1.69
TRA2B-201ENST00000259043 TRPC4APQ8TEL6 797 aa4.52□□□□□ -1.69
TRA2B-201ENST00000259043 SLC44A1Q8WWI5 657 aa4.52□□□□□ -1.69
TRA2B-201ENST00000259043 VPS33AQ96AX1 596 aa4.52□□□□□ -1.69
TRA2B-201ENST00000259043 PTERQ96BW5 349 aa4.52□□□□□ -1.69
TRA2B-201ENST00000259043 FBXO17Q96EF6 278 aa4.52□□□□□ -1.69
TRA2B-201ENST00000259043 CEP295NLQ96MC4 621 aa4.52□□□□□ -1.69
TRA2B-201ENST00000259043 CFAP57Q96MR6 1250 aa4.52□□□□□ -1.69
TRA2B-201ENST00000259043 DUX3Q96PT4 197 aa4.52□□□□□ -1.69
TRA2B-201ENST00000259043 RAB3IPQ96QF0 476 aaPredicted RBP4.52□□□□□ -1.69
TRA2B-201ENST00000259043 GAD1Q99259 594 aa4.52□□□□□ -1.69
TRA2B-201ENST00000259043 MAGIXQ9H6Y5 334 aa4.52□□□□□ -1.69
TRA2B-201ENST00000259043 FBXL2Q9UKC9 423 aa4.52□□□□□ -1.69
TRA2B-201ENST00000259043 PLAGL1Q9UM63 463 aa4.52□□□□□ -1.69
TRA2B-201ENST00000259043 KLHL20Q9Y2M5 609 aa4.52□□□□□ -1.69
TRA2B-201ENST00000259043 DMXL1Q9Y485 3027 aa4.51□□□□□ -1.69
TRA2B-201ENST00000259043 DMDP11532 3685 aa4.51□□□□□ -1.69
TRA2B-201ENST00000259043 GRIN2DO15399 1336 aa4.51□□□□□ -1.69
TRA2B-201ENST00000259043 ELP1O95163 1332 aa4.51□□□□□ -1.69
TRA2B-201ENST00000259043 GVINP1Q7Z2Y8 2422 aa4.51□□□□□ -1.69
TRA2B-201ENST00000259043 ATG2AQ2TAZ0 1938 aa4.51□□□□□ -1.69
TRA2B-201ENST00000259043 LOC102723996A0A087X1L8 192 aa4.51□□□□□ -1.69
TRA2B-201ENST00000259043 A0A1B0GUL7 405 aa4.51□□□□□ -1.69
TRA2B-201ENST00000259043 TRBC2A0A5B9 178 aa4.51□□□□□ -1.69
TRA2B-201ENST00000259043 H3BQ06 376 aaPredicted RBP4.51□□□□□ -1.69
TRA2B-201ENST00000259043 M0QZ24 198 aa4.51□□□□□ -1.69
TRA2B-201ENST00000259043 KCNN4O15554 427 aa4.51□□□□□ -1.69
TRA2B-201ENST00000259043 IGHV4-39P01824 125 aa4.51□□□□□ -1.69
TRA2B-201ENST00000259043 ASGR1P07306 291 aa4.51□□□□□ -1.69
TRA2B-201ENST00000259043 CA3P07451 260 aa4.51□□□□□ -1.69
TRA2B-201ENST00000259043 MMP9P14780 707 aa4.51□□□□□ -1.69
TRA2B-201ENST00000259043 IL9P15248 144 aa4.51□□□□□ -1.69
TRA2B-201ENST00000259043 POLR2CP19387 275 aaPredicted RBP4.51□□□□□ -1.69
TRA2B-201ENST00000259043 HOXA1P49639 335 aaPredicted RBP4.51□□□□□ -1.69
TRA2B-201ENST00000259043 GPR143P51810 404 aa4.51□□□□□ -1.69
TRA2B-201ENST00000259043 CCL23P55773 120 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms