RNA–Protein interactions for RNA: ENST00000258772.9

DDX56-201, Transcript of DEAD-box helicase 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX56, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-201ENST00000258772 ITPKAP23677 461 aa14.78□□□□□ -0.04
DDX56-201ENST00000258772 DNAJA1P31689 397 aaKnown RBP14.78□□□□□ -0.04
DDX56-201ENST00000258772 KDELR2P33947 212 aa14.78□□□□□ -0.04
DDX56-201ENST00000258772 IDUAP35475 653 aa14.78□□□□□ -0.04
DDX56-201ENST00000258772 CTSOP43234 321 aaPredicted RBP14.78□□□□□ -0.04
DDX56-201ENST00000258772 STK19P49842 368 aaPredicted RBP14.78□□□□□ -0.04
DDX56-201ENST00000258772 BCAP31P51572 246 aa14.78□□□□□ -0.04
DDX56-201ENST00000258772 VLDLRP98155 873 aa14.78□□□□□ -0.04
DDX56-201ENST00000258772 KCNC4Q03721 635 aa14.78□□□□□ -0.04
DDX56-201ENST00000258772 OCA2Q04671 838 aa14.78□□□□□ -0.04
DDX56-201ENST00000258772 CHIT1Q13231 466 aa14.78□□□□□ -0.04
DDX56-201ENST00000258772 UGT8Q16880 541 aa14.78□□□□□ -0.04
DDX56-201ENST00000258772 USP45Q70EL2 814 aa14.78□□□□□ -0.04
DDX56-201ENST00000258772 VTCN1Q7Z7D3 282 aa14.78□□□□□ -0.04
DDX56-201ENST00000258772 BBS7Q8IWZ6 715 aa14.78□□□□□ -0.04
DDX56-201ENST00000258772 ZZZ3Q8IYH5 903 aa14.78□□□□□ -0.04
DDX56-201ENST00000258772 TMCO5AQ8N6Q1 288 aa14.78□□□□□ -0.04
DDX56-201ENST00000258772 ECHDC3Q96DC8 303 aa14.78□□□□□ -0.04
DDX56-201ENST00000258772 BCL7BQ9BQE9 202 aa14.78□□□□□ -0.04
DDX56-201ENST00000258772 RPS6KA6Q9UK32 745 aa14.78□□□□□ -0.04
DDX56-201ENST00000258772 LSM7Q9UK45 103 aaKnown RBP14.78□□□□□ -0.04
DDX56-201ENST00000258772 TMPRSS11EQ9UL52 423 aa14.78□□□□□ -0.04
DDX56-201ENST00000258772 ABT1Q9ULW3 272 aaKnown RBP14.78□□□□□ -0.04
DDX56-201ENST00000258772 SH3BP1Q9Y3L3 701 aa14.78□□□□□ -0.04
DDX56-201ENST00000258772 GMPPBQ9Y5P6 360 aa14.78□□□□□ -0.04
DDX56-201ENST00000258772 PABPN1LA6NDY0 278 aaKnown RBP14.78□□□□□ -0.04
DDX56-201ENST00000258772 FABP3P05413 133 aa14.78□□□□□ -0.04
DDX56-201ENST00000258772 MPC1LP0DKB6 136 aa14.78□□□□□ -0.04
DDX56-201ENST00000258772 JUPP14923 745 aa14.78□□□□□ -0.04
DDX56-201ENST00000258772 PORP16435 677 aaPredicted RBP14.78□□□□□ -0.04
DDX56-201ENST00000258772 FPR1P21462 350 aa14.78□□□□□ -0.04
DDX56-201ENST00000258772 HALP42357 657 aa14.78□□□□□ -0.04
DDX56-201ENST00000258772 MAP2K4P45985 399 aa14.78□□□□□ -0.04
DDX56-201ENST00000258772 WNT3P56703 355 aa14.78□□□□□ -0.04
DDX56-201ENST00000258772 RELAQ04206 551 aa14.78□□□□□ -0.04
DDX56-201ENST00000258772 SRSF11Q05519 484 aaKnown RBP14.78□□□□□ -0.04
DDX56-201ENST00000258772 ABRQ12979 859 aa14.78□□□□□ -0.04
DDX56-201ENST00000258772 ZNF846Q147U1 533 aa14.78□□□□□ -0.04
DDX56-201ENST00000258772 ZNF621Q6ZSS3 439 aa14.78□□□□□ -0.04
DDX56-201ENST00000258772 GALNT10Q86SR1 603 aa14.78□□□□□ -0.04
DDX56-201ENST00000258772 RAET1EQ8TD07 263 aa14.78□□□□□ -0.04
DDX56-201ENST00000258772 FCRL1Q96LA6 429 aa14.78□□□□□ -0.04
DDX56-201ENST00000258772 ZNF641Q96N77 438 aaPredicted RBP14.78□□□□□ -0.04
DDX56-201ENST00000258772 ATG10Q9H0Y0 220 aa14.78□□□□□ -0.04
DDX56-201ENST00000258772 PDP1Q9P0J1 537 aaPredicted RBP14.78□□□□□ -0.04
DDX56-201ENST00000258772 DOLKQ9UPQ8 538 aa14.78□□□□□ -0.04
DDX56-201ENST00000258772 MYOFQ9NZM1 2061 aa14.78□□□□□ -0.04
DDX56-201ENST00000258772 UPK3BL1B0FP48 263 aa14.77□□□□□ -0.04
DDX56-201ENST00000258772 UPK3BL2E5RIL1 263 aa14.77□□□□□ -0.04
DDX56-201ENST00000258772 EPN2O95208 641 aa14.77□□□□□ -0.04
DDX56-201ENST00000258772 ATP1B2P14415 290 aaPredicted RBP14.77□□□□□ -0.04
DDX56-201ENST00000258772 CCR3P51677 355 aa14.77□□□□□ -0.04
DDX56-201ENST00000258772 RAB33AQ14088 237 aa14.77□□□□□ -0.04
DDX56-201ENST00000258772 MPPE1Q53F39 396 aa14.77□□□□□ -0.04
DDX56-201ENST00000258772 MPP7Q5T2T1 576 aa14.77□□□□□ -0.04
DDX56-201ENST00000258772 EGFLAMQ63HQ2 1017 aa14.77□□□□□ -0.04
DDX56-201ENST00000258772 ERICH5Q6P6B1 374 aa14.77□□□□□ -0.04
DDX56-201ENST00000258772 SLCO6A1Q86UG4 719 aa14.77□□□□□ -0.04
DDX56-201ENST00000258772 PTOV1Q86YD1 416 aa14.77□□□□□ -0.04
DDX56-201ENST00000258772 SYT12Q8IV01 421 aa14.77□□□□□ -0.04
DDX56-201ENST00000258772 CPXM2Q8N436 756 aa14.77□□□□□ -0.04
DDX56-201ENST00000258772 TTC29Q8NA56 475 aaPredicted RBP14.77□□□□□ -0.04
DDX56-201ENST00000258772 VMP1Q96GC9 406 aa14.77□□□□□ -0.04
DDX56-201ENST00000258772 MCCC1Q96RQ3 725 aaPredicted RBP14.77□□□□□ -0.04
DDX56-201ENST00000258772 SCN3BQ9NY72 215 aa14.77□□□□□ -0.04
DDX56-201ENST00000258772 NDRG4Q9ULP0 352 aaKnown RBP14.77□□□□□ -0.04
DDX56-201ENST00000258772 INSL5Q9Y5Q6 135 aa14.77□□□□□ -0.04
DDX56-201ENST00000258772 SLC22A1O15245 554 aa14.77□□□□□ -0.05
DDX56-201ENST00000258772 SLC16A5O15375 505 aa14.77□□□□□ -0.05
DDX56-201ENST00000258772 PRMT3O60678 531 aa14.77□□□□□ -0.05
DDX56-201ENST00000258772 JRKO75564 520 aa14.77□□□□□ -0.05
DDX56-201ENST00000258772 C1SP09871 688 aa14.77□□□□□ -0.05
DDX56-201ENST00000258772 CYP2A7P20853 494 aa14.77□□□□□ -0.05
DDX56-201ENST00000258772 HOXA9P31269 272 aa14.77□□□□□ -0.05
DDX56-201ENST00000258772 PFN3P60673 137 aa14.77□□□□□ -0.05
DDX56-201ENST00000258772 ADPRMQ3LIE5 342 aa14.77□□□□□ -0.05
DDX56-201ENST00000258772 SYT6Q5T7P8 510 aaPredicted RBP14.77□□□□□ -0.05
DDX56-201ENST00000258772 NIPAL1Q6NVV3 410 aa14.77□□□□□ -0.05
DDX56-201ENST00000258772 SERPINA13PQ6UXR4 307 aa14.77□□□□□ -0.05
DDX56-201ENST00000258772 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.77□□□□□ -0.05
DDX56-201ENST00000258772 HTR3DQ70Z44 454 aa14.77□□□□□ -0.05
DDX56-201ENST00000258772 CBLL1Q75N03 491 aa14.77□□□□□ -0.05
DDX56-201ENST00000258772 EIF3MQ7L2H7 374 aaKnown RBP14.77□□□□□ -0.05
DDX56-201ENST00000258772 BTLAQ7Z6A9 289 aa14.77□□□□□ -0.05
DDX56-201ENST00000258772 TCEAL8Q8IYN2 117 aa14.77□□□□□ -0.05
DDX56-201ENST00000258772 YIPF6Q96EC8 236 aa14.77□□□□□ -0.05
DDX56-201ENST00000258772 APOL4Q9BPW4 351 aa14.77□□□□□ -0.05
DDX56-201ENST00000258772 HMG20AQ9NP66 347 aa14.77□□□□□ -0.05
DDX56-201ENST00000258772 CFAP97Q9P2B7 532 aa14.77□□□□□ -0.05
DDX56-201ENST00000258772 MAGEB17A8MXT2 336 aa14.76□□□□□ -0.05
DDX56-201ENST00000258772 FKBP9O95302 570 aa14.76□□□□□ -0.05
DDX56-201ENST00000258772 CPSF4O95639 269 aaKnown RBP14.76□□□□□ -0.05
DDX56-201ENST00000258772 HOXD10P28358 340 aa14.76□□□□□ -0.05
DDX56-201ENST00000258772 EPHA2P29317 976 aa14.76□□□□□ -0.05
DDX56-201ENST00000258772 SPINT3P49223 89 aa14.76□□□□□ -0.05
DDX56-201ENST00000258772 AP1S2P56377 157 aa14.76□□□□□ -0.05
DDX56-201ENST00000258772 CYP4F8P98187 520 aa14.76□□□□□ -0.05
DDX56-201ENST00000258772 SP140Q13342 867 aa14.76□□□□□ -0.05
DDX56-201ENST00000258772 PLEKHS1Q5SXH7 462 aa14.76□□□□□ -0.05
DDX56-201ENST00000258772 LINC00299Q6ZSB3 139 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms