RNA–Protein interactions for RNA: ENST00000258499.7

USP44-201, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 4,022 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-201ENST00000258499 SLC39A7Q92504 469 aa4.61□□□□□ -1.67
USP44-201ENST00000258499 CLP1Q92989 425 aaKnown RBP4.61□□□□□ -1.67
USP44-201ENST00000258499 RHBDF1Q96CC6 855 aa4.61□□□□□ -1.67
USP44-201ENST00000258499 RHNO1Q9BSD3 238 aa4.61□□□□□ -1.67
USP44-201ENST00000258499 ACPTQ9BZG2 426 aa4.61□□□□□ -1.67
USP44-201ENST00000258499 RNF38Q9H0F5 515 aa4.61□□□□□ -1.67
USP44-201ENST00000258499 SMG9Q9H0W8 520 aaKnown RBP4.61□□□□□ -1.67
USP44-201ENST00000258499 CARS2Q9HA77 564 aaKnown RBP4.61□□□□□ -1.67
USP44-201ENST00000258499 NTN4Q9HB63 628 aa4.61□□□□□ -1.67
USP44-201ENST00000258499 DCAF13Q9NV06 445 aaKnown RBP4.61□□□□□ -1.67
USP44-201ENST00000258499 PAK1IP1Q9NWT1 392 aaPredicted RBP4.61□□□□□ -1.67
USP44-201ENST00000258499 ELOVL2Q9NXB9 296 aa4.61□□□□□ -1.67
USP44-201ENST00000258499 VPS29Q9UBQ0 182 aa4.61□□□□□ -1.67
USP44-201ENST00000258499 BTBD3Q9Y2F9 522 aa4.61□□□□□ -1.67
USP44-201ENST00000258499 DYRK1BQ9Y463 629 aa4.61□□□□□ -1.67
USP44-201ENST00000258499 OARD1Q9Y530 152 aa4.61□□□□□ -1.67
USP44-201ENST00000258499 DNAH12Q6ZR08 3092 aa4.61□□□□□ -1.67
USP44-201ENST00000258499 TRIP12Q14669 1992 aaPredicted RBP4.61□□□□□ -1.67
USP44-201ENST00000258499 IGLV3-10A0A075B6K4 115 aa4.61□□□□□ -1.67
USP44-201ENST00000258499 A0A096LPI6 279 aa4.61□□□□□ -1.67
USP44-201ENST00000258499 PRR23AA6NEV1 266 aa4.61□□□□□ -1.67
USP44-201ENST00000258499 PSMD11O00231 422 aa4.61□□□□□ -1.67
USP44-201ENST00000258499 ARNTLO00327 626 aa4.61□□□□□ -1.67
USP44-201ENST00000258499 HOXA2O43364 376 aa4.61□□□□□ -1.67
USP44-201ENST00000258499 TPST2O60704 377 aa4.61□□□□□ -1.67
USP44-201ENST00000258499 TGFB1P01137 390 aa4.61□□□□□ -1.67
USP44-201ENST00000258499 GALTP07902 379 aa4.61□□□□□ -1.67
USP44-201ENST00000258499 ALOX5P09917 674 aa4.61□□□□□ -1.67
USP44-201ENST00000258499 C21orf33P30042 268 aaPredicted RBP4.61□□□□□ -1.67
USP44-201ENST00000258499 GRK3P35626 688 aa4.61□□□□□ -1.67
USP44-201ENST00000258499 CDKN2CP42773 168 aa4.61□□□□□ -1.67
USP44-201ENST00000258499 PREPP48147 710 aa4.61□□□□□ -1.67
USP44-201ENST00000258499 CLCN7P51798 805 aa4.61□□□□□ -1.67
USP44-201ENST00000258499 TIAL1Q01085 375 aaKnown RBP eCLIP4.61□□□□□ -1.67
USP44-201ENST00000258499 CAMK2GQ13555 558 aaPredicted RBP4.61□□□□□ -1.67
USP44-201ENST00000258499 KRT33BQ14525 404 aa4.61□□□□□ -1.67
USP44-201ENST00000258499 VMACQ2NL98 169 aa4.61□□□□□ -1.67
USP44-201ENST00000258499 KIAA1614Q5VZ46 1190 aa4.61□□□□□ -1.67
USP44-201ENST00000258499 ATG9BQ674R7 924 aa4.61□□□□□ -1.67
USP44-201ENST00000258499 TYW3Q6IPR3 259 aaKnown RBP4.61□□□□□ -1.67
USP44-201ENST00000258499 RFLNAQ6ZTI6 216 aa4.61□□□□□ -1.67
USP44-201ENST00000258499 PTCHD4Q6ZW05 846 aa4.61□□□□□ -1.67
USP44-201ENST00000258499 AKAP14Q86UN6 197 aa4.61□□□□□ -1.67
USP44-201ENST00000258499 KBTBD8Q8NFY9 601 aa4.61□□□□□ -1.67
USP44-201ENST00000258499 OR10G2Q8NGC3 310 aa4.61□□□□□ -1.67
USP44-201ENST00000258499 ASZ1Q8WWH4 475 aa4.61□□□□□ -1.67
USP44-201ENST00000258499 DPF3Q92784 378 aa4.61□□□□□ -1.67
USP44-201ENST00000258499 PLD4Q96BZ4 506 aa4.61□□□□□ -1.67
USP44-201ENST00000258499 RDH12Q96NR8 316 aa4.61□□□□□ -1.67
USP44-201ENST00000258499 CORO1BQ9BR76 489 aa4.61□□□□□ -1.67
USP44-201ENST00000258499 EMILIN2Q9BXX0 1053 aa4.61□□□□□ -1.67
USP44-201ENST00000258499 MRPL9Q9BYD2 267 aaKnown RBP4.61□□□□□ -1.67
USP44-201ENST00000258499 KCNH6Q9H252 994 aa4.61□□□□□ -1.67
USP44-201ENST00000258499 CTPS2Q9NRF8 586 aa4.61□□□□□ -1.67
USP44-201ENST00000258499 MRPL17Q9NRX2 175 aaKnown RBP4.61□□□□□ -1.67
USP44-201ENST00000258499 INTS6Q9UL03 887 aaKnown RBP4.61□□□□□ -1.67
USP44-201ENST00000258499 MED16Q9Y2X0 877 aa4.61□□□□□ -1.67
USP44-201ENST00000258499 YIPF1Q9Y548 306 aa4.61□□□□□ -1.67
USP44-201ENST00000258499 KCNE2Q9Y6J6 123 aa4.61□□□□□ -1.67
USP44-201ENST00000258499 MYO9BQ13459 2157 aa4.61□□□□□ -1.67
USP44-201ENST00000258499 SMIM30A4D0T7 59 aa4.6□□□□□ -1.67
USP44-201ENST00000258499 NEDD8-MDP1E9PL57 170 aa4.6□□□□□ -1.67
USP44-201ENST00000258499 M0QX08 132 aa4.6□□□□□ -1.67
USP44-201ENST00000258499 OR10H3O60404 316 aa4.6□□□□□ -1.67
USP44-201ENST00000258499 SEC14L2O76054 403 aa4.6□□□□□ -1.67
USP44-201ENST00000258499 TSPAN12O95859 305 aa4.6□□□□□ -1.67
USP44-201ENST00000258499 HPRP00739 348 aa4.6□□□□□ -1.67
USP44-201ENST00000258499 CCDC159P0C7I6 412 aa4.6□□□□□ -1.67
USP44-201ENST00000258499 LAMP1P11279 417 aa4.6□□□□□ -1.67
USP44-201ENST00000258499 ATF6P18850 670 aa4.6□□□□□ -1.67
USP44-201ENST00000258499 TGFBR1P36897 503 aa4.6□□□□□ -1.67
USP44-201ENST00000258499 MAPK8P45983 427 aa4.6□□□□□ -1.67
USP44-201ENST00000258499 CD97P48960 835 aa4.6□□□□□ -1.67
USP44-201ENST00000258499 CDC42P60953 191 aa4.6□□□□□ -1.67
USP44-201ENST00000258499 ACVR1Q04771 509 aa4.6□□□□□ -1.67
USP44-201ENST00000258499 CD300CQ08708 224 aa4.6□□□□□ -1.67
USP44-201ENST00000258499 BTG3Q14201 252 aaPredicted RBP4.6□□□□□ -1.67
USP44-201ENST00000258499 TCEA2Q15560 299 aa4.6□□□□□ -1.67
USP44-201ENST00000258499 DUOXA1Q1HG43 343 aa4.6□□□□□ -1.67
USP44-201ENST00000258499 RUNDC3AQ59EK9 446 aa4.6□□□□□ -1.67
USP44-201ENST00000258499 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.6□□□□□ -1.67
USP44-201ENST00000258499 LYPLAL1Q5VWZ2 237 aa4.6□□□□□ -1.67
USP44-201ENST00000258499 NCEH1Q6PIU2 408 aa4.6□□□□□ -1.67
USP44-201ENST00000258499 SERPINA13PQ6UXR4 307 aa4.6□□□□□ -1.67
USP44-201ENST00000258499 DEF8Q6ZN54 512 aa4.6□□□□□ -1.67
USP44-201ENST00000258499 Q6ZVU0 165 aa4.6□□□□□ -1.67
USP44-201ENST00000258499 CEP68Q76N32 757 aa4.6□□□□□ -1.67
USP44-201ENST00000258499 EIF3MQ7L2H7 374 aaKnown RBP4.6□□□□□ -1.67
USP44-201ENST00000258499 TMEM179BQ7Z7N9 219 aa4.6□□□□□ -1.67
USP44-201ENST00000258499 RTN4RL1Q86UN2 441 aaPredicted RBP4.6□□□□□ -1.67
USP44-201ENST00000258499 GPR65Q8IYL9 337 aa4.6□□□□□ -1.67
USP44-201ENST00000258499 LGI4Q8N135 537 aa4.6□□□□□ -1.67
USP44-201ENST00000258499 ZNF513Q8N8E2 541 aaPredicted RBP4.6□□□□□ -1.67
USP44-201ENST00000258499 UBASH3BQ8TF42 649 aa4.6□□□□□ -1.67
USP44-201ENST00000258499 MYLIPQ8WY64 445 aa4.6□□□□□ -1.67
USP44-201ENST00000258499 BARD1Q99728 777 aaKnown RBP4.6□□□□□ -1.67
USP44-201ENST00000258499 HTATIP2Q9BUP3 242 aa4.6□□□□□ -1.67
USP44-201ENST00000258499 C11orf16Q9NQ32 467 aa4.6□□□□□ -1.67
USP44-201ENST00000258499 TOR4AQ9NXH8 423 aa4.6□□□□□ -1.67
USP44-201ENST00000258499 SLC25A37Q9NYZ2 338 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms