RNA–Protein interactions for RNA: ENST00000243082.4

HOXC11-201, Transcript of homeobox C11, humanhuman

TSL 3 BASIC

Gene HOXC11, Length 2,039 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-201ENST00000243082 CROCCQ5TZA2 2017 aa17.87■□□□□ 0.45
HOXC11-201ENST00000243082 A0A096LPI6 279 aa17.86■□□□□ 0.45
HOXC11-201ENST00000243082 KANSL1LA0AUZ9 987 aa17.86■□□□□ 0.45
HOXC11-201ENST00000243082 CKMT2P17540 419 aa17.86■□□□□ 0.45
HOXC11-201ENST00000243082 PRPS1L1P21108 318 aa17.86■□□□□ 0.45
HOXC11-201ENST00000243082 HSPA13P48723 471 aa17.86■□□□□ 0.45
HOXC11-201ENST00000243082 PNLIPRP1P54315 467 aa17.86■□□□□ 0.45
HOXC11-201ENST00000243082 MTAPQ13126 283 aa17.86■□□□□ 0.45
HOXC11-201ENST00000243082 RPA4Q13156 261 aa17.86■□□□□ 0.45
HOXC11-201ENST00000243082 SF1Q15637 639 aaKnown RBP17.86■□□□□ 0.45
HOXC11-201ENST00000243082 UGT2A3Q6UWM9 527 aa17.86■□□□□ 0.45
HOXC11-201ENST00000243082 PDZD3Q86UT5 571 aa17.86■□□□□ 0.45
HOXC11-201ENST00000243082 LRRTM4Q86VH4 590 aa17.86■□□□□ 0.45
HOXC11-201ENST00000243082 PHC3Q8NDX5 983 aa17.86■□□□□ 0.45
HOXC11-201ENST00000243082 METTL2AQ96IZ6 378 aaKnown RBP17.86■□□□□ 0.45
HOXC11-201ENST00000243082 NSMCE2Q96MF7 247 aa17.86■□□□□ 0.45
HOXC11-201ENST00000243082 CCDC115Q96NT0 180 aa17.86■□□□□ 0.45
HOXC11-201ENST00000243082 INPP5KQ9BT40 448 aa17.86■□□□□ 0.45
HOXC11-201ENST00000243082 ANAPC2Q9UJX6 822 aa17.86■□□□□ 0.45
HOXC11-201ENST00000243082 RUVBL1Q9Y265 456 aaKnown RBP17.86■□□□□ 0.45
HOXC11-201ENST00000243082 ASF1AQ9Y294 204 aa17.86■□□□□ 0.45
HOXC11-201ENST00000243082 FAM149AA5PLN7 773 aa17.86■□□□□ 0.45
HOXC11-201ENST00000243082 TPST1O60507 370 aa17.86■□□□□ 0.45
HOXC11-201ENST00000243082 PCNAP12004 261 aa17.86■□□□□ 0.45
HOXC11-201ENST00000243082 FASP25445 335 aa17.86■□□□□ 0.45
HOXC11-201ENST00000243082 RAE1P78406 368 aaKnown RBP17.86■□□□□ 0.45
HOXC11-201ENST00000243082 TSTA3Q13630 321 aaPredicted RBP17.86■□□□□ 0.45
HOXC11-201ENST00000243082 C6orf52Q5T4I8 152 aa17.86■□□□□ 0.45
HOXC11-201ENST00000243082 ZNF776Q68DI1 518 aaPredicted RBP17.86■□□□□ 0.45
HOXC11-201ENST00000243082 OR52E8Q6IFG1 317 aa17.86■□□□□ 0.45
HOXC11-201ENST00000243082 MED27Q6P2C8 311 aa17.86■□□□□ 0.45
HOXC11-201ENST00000243082 ANKRD46Q86W74 232 aa17.86■□□□□ 0.45
HOXC11-201ENST00000243082 SYT12Q8IV01 421 aa17.86■□□□□ 0.45
HOXC11-201ENST00000243082 OXR1Q8N573 874 aa17.86■□□□□ 0.45
HOXC11-201ENST00000243082 ZNF548Q8NEK5 533 aaPredicted RBP17.86■□□□□ 0.45
HOXC11-201ENST00000243082 OR2T12Q8NG77 320 aa17.86■□□□□ 0.45
HOXC11-201ENST00000243082 OR5AR1Q8NGP9 310 aa17.86■□□□□ 0.45
HOXC11-201ENST00000243082 ITCHQ96J02 903 aa17.86■□□□□ 0.45
HOXC11-201ENST00000243082 RIPOR3Q96MK2 946 aa17.86■□□□□ 0.45
HOXC11-201ENST00000243082 SH3GL1Q99961 368 aa17.86■□□□□ 0.45
HOXC11-201ENST00000243082 Q9H521 79 aa17.86■□□□□ 0.45
HOXC11-201ENST00000243082 RMND5AQ9H871 391 aa17.86■□□□□ 0.45
HOXC11-201ENST00000243082 UBAP1Q9NZ09 502 aa17.86■□□□□ 0.45
HOXC11-201ENST00000243082 DYRK1BQ9Y463 629 aa17.86■□□□□ 0.45
HOXC11-201ENST00000243082 PRMT3O60678 531 aa17.85■□□□□ 0.45
HOXC11-201ENST00000243082 PAK4O96013 591 aaPredicted RBP17.85■□□□□ 0.45
HOXC11-201ENST00000243082 C1GALT1C1LP0DN25 315 aa17.85■□□□□ 0.45
HOXC11-201ENST00000243082 TRIM23P36406 574 aa17.85■□□□□ 0.45
HOXC11-201ENST00000243082 CDKN2CP42773 168 aa17.85■□□□□ 0.45
HOXC11-201ENST00000243082 ACSM2AQ08AH3 577 aa17.85■□□□□ 0.45
HOXC11-201ENST00000243082 IRF4Q15306 451 aa17.85■□□□□ 0.45
HOXC11-201ENST00000243082 UGT8Q16880 541 aa17.85■□□□□ 0.45
HOXC11-201ENST00000243082 ATG9BQ674R7 924 aa17.85■□□□□ 0.45
HOXC11-201ENST00000243082 ACSM2BQ68CK6 577 aa17.85■□□□□ 0.45
HOXC11-201ENST00000243082 OR4F3Q6IEY1 312 aa17.85■□□□□ 0.45
HOXC11-201ENST00000243082 PPP4R4Q6NUP7 873 aa17.85■□□□□ 0.45
HOXC11-201ENST00000243082 MSANTD1Q6ZTZ1 278 aa17.85■□□□□ 0.45
HOXC11-201ENST00000243082 GPR180Q86V85 440 aa17.85■□□□□ 0.45
HOXC11-201ENST00000243082 CHTF18Q8WVB6 975 aa17.85■□□□□ 0.45
HOXC11-201ENST00000243082 CPPED1Q9BRF8 314 aaPredicted RBP17.85■□□□□ 0.45
HOXC11-201ENST00000243082 MKRN2Q9H000 416 aaKnown RBP17.85■□□□□ 0.45
HOXC11-201ENST00000243082 KAT8Q9H7Z6 458 aaKnown RBP17.85■□□□□ 0.45
HOXC11-201ENST00000243082 OR1A2Q9Y585 309 aa17.85■□□□□ 0.45
HOXC11-201ENST00000243082 SPTBN5Q9NRC6 3674 aaKnown RBP17.85■□□□□ 0.45
HOXC11-201ENST00000243082 SH3BGRLO75368 114 aa17.84■□□□□ 0.45
HOXC11-201ENST00000243082 C21orf58P58505 322 aa17.84■□□□□ 0.45
HOXC11-201ENST00000243082 METRNLQ641Q3 311 aa17.84■□□□□ 0.45
HOXC11-201ENST00000243082 ZBTB49Q6ZSB9 765 aa17.84■□□□□ 0.45
HOXC11-201ENST00000243082 PHACTR4Q8IZ21 702 aa17.84■□□□□ 0.45
HOXC11-201ENST00000243082 TP53I13Q8NBR0 393 aaPredicted RBP17.84■□□□□ 0.45
HOXC11-201ENST00000243082 OR7A2PQ8NGA2 310 aa17.84■□□□□ 0.45
HOXC11-201ENST00000243082 AURKBQ96GD4 344 aaPredicted RBP17.84■□□□□ 0.45
HOXC11-201ENST00000243082 CENPNQ96H22 339 aaPredicted RBP17.84■□□□□ 0.45
HOXC11-201ENST00000243082 IL17FQ96PD4 163 aa17.84■□□□□ 0.45
HOXC11-201ENST00000243082 EFCAB11Q9BUY7 163 aa17.84■□□□□ 0.45
HOXC11-201ENST00000243082 OSBPL6Q9BZF3 934 aa17.84■□□□□ 0.45
HOXC11-201ENST00000243082 EHD1Q9H4M9 534 aa17.84■□□□□ 0.45
HOXC11-201ENST00000243082 GEMIN8Q9NWZ8 242 aaKnown RBP17.84■□□□□ 0.45
HOXC11-201ENST00000243082 DNMT3AQ9Y6K1 912 aaPredicted RBP17.84■□□□□ 0.45
HOXC11-201ENST00000243082 DOCK9Q9BZ29 2069 aa17.84■□□□□ 0.45
HOXC11-201ENST00000243082 SOCS2O14508 198 aa17.84■□□□□ 0.45
HOXC11-201ENST00000243082 SCN2BO60939 215 aa17.84■□□□□ 0.45
HOXC11-201ENST00000243082 GSNP06396 782 aa17.84■□□□□ 0.45
HOXC11-201ENST00000243082 ANXA6P08133 673 aa17.84■□□□□ 0.45
HOXC11-201ENST00000243082 TEAD1P28347 426 aa17.84■□□□□ 0.45
HOXC11-201ENST00000243082 KIR3DL1P43629 444 aa17.84■□□□□ 0.45
HOXC11-201ENST00000243082 CCT8P50990 548 aa17.84■□□□□ 0.45
HOXC11-201ENST00000243082 GZMMP51124 257 aa17.84■□□□□ 0.45
HOXC11-201ENST00000243082 WNT3P56703 355 aa17.84■□□□□ 0.45
HOXC11-201ENST00000243082 RPS13P62277 151 aaKnown RBP17.84■□□□□ 0.45
HOXC11-201ENST00000243082 SLBPQ14493 270 aaKnown RBP eCLIP17.84■□□□□ 0.45
HOXC11-201ENST00000243082 TMEM196Q5HYL7 178 aa17.84■□□□□ 0.45
HOXC11-201ENST00000243082 EPHX4Q8IUS5 362 aa17.84■□□□□ 0.45
HOXC11-201ENST00000243082 LAS2Q8IYD9 372 aa17.84■□□□□ 0.45
HOXC11-201ENST00000243082 TBC1D21Q8IYX1 336 aa17.84■□□□□ 0.45
HOXC11-201ENST00000243082 C1orf52Q8N6N3 182 aaKnown RBP17.84■□□□□ 0.45
HOXC11-201ENST00000243082 SLC5A11Q8WWX8 675 aa17.84■□□□□ 0.45
HOXC11-201ENST00000243082 TFGQ92734 400 aaPredicted RBP17.84■□□□□ 0.45
HOXC11-201ENST00000243082 KLK6Q92876 244 aa17.84■□□□□ 0.45
HOXC11-201ENST00000243082 RAD51AP1Q96B01 352 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms