RNA–Protein interactions for RNA: ENST00000238616.9

NEK9-201, Transcript of NIMA related kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEK9, Length 8,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-201ENST00000238616 SMIM30A4D0T7 59 aa12.91□□□□□ -0.34
NEK9-201ENST00000238616 NSG1P42857 185 aa12.91□□□□□ -0.34
NEK9-201ENST00000238616 S100A12P80511 92 aa12.91□□□□□ -0.34
NEK9-201ENST00000238616 GAD2Q05329 585 aa12.91□□□□□ -0.34
NEK9-201ENST00000238616 LRRC37A5PQ49AS3 106 aa12.91□□□□□ -0.34
NEK9-201ENST00000238616 PLPPR4Q7Z2D5 763 aa12.91□□□□□ -0.34
NEK9-201ENST00000238616 AGAP2Q99490 1192 aa12.91□□□□□ -0.34
NEK9-201ENST00000238616 TREX2Q9BQ50 279 aaPredicted RBP12.91□□□□□ -0.34
NEK9-201ENST00000238616 GRHPRQ9UBQ7 328 aa12.91□□□□□ -0.34
NEK9-201ENST00000238616 FXYD6-FXYD2A0A087WZ82 144 aa12.91□□□□□ -0.34
NEK9-201ENST00000238616 CCNE2O96020 404 aa12.91□□□□□ -0.34
NEK9-201ENST00000238616 UGT1A1P22309 533 aa12.91□□□□□ -0.34
NEK9-201ENST00000238616 AIMP2Q13155 320 aaKnown RBP12.91□□□□□ -0.34
NEK9-201ENST00000238616 TOP6BLQ8N6T0 577 aa12.91□□□□□ -0.34
NEK9-201ENST00000238616 OR1F2PQ96R84 312 aa12.91□□□□□ -0.34
NEK9-201ENST00000238616 ASPNQ9BXN1 380 aa12.91□□□□□ -0.34
NEK9-201ENST00000238616 FXYD6Q9H0Q3 95 aa12.91□□□□□ -0.34
NEK9-201ENST00000238616 CARD8Q9Y2G2 431 aa12.91□□□□□ -0.34
NEK9-201ENST00000238616 PCDHGA10Q9Y5H3 936 aa12.91□□□□□ -0.34
NEK9-201ENST00000238616 CLDN25C9JDP6 229 aa12.9□□□□□ -0.34
NEK9-201ENST00000238616 UNC5CO95185 931 aa12.9□□□□□ -0.34
NEK9-201ENST00000238616 PDYNP01213 254 aa12.9□□□□□ -0.34
NEK9-201ENST00000238616 KLHL22Q53GT1 634 aa12.9□□□□□ -0.34
NEK9-201ENST00000238616 FIGNQ5HY92 759 aa12.9□□□□□ -0.34
NEK9-201ENST00000238616 SLC26A9Q7LBE3 791 aa12.9□□□□□ -0.34
NEK9-201ENST00000238616 OR5T1Q8NG75 326 aa12.9□□□□□ -0.34
NEK9-201ENST00000238616 TLR10Q9BXR5 811 aa12.9□□□□□ -0.34
NEK9-201ENST00000238616 ATXN7L1Q9ULK2 861 aaPredicted RBP12.9□□□□□ -0.34
NEK9-201ENST00000238616 CDC14AQ9UNH5 594 aa12.9□□□□□ -0.34
NEK9-201ENST00000238616 REXO2Q9Y3B8 237 aaKnown RBP12.9□□□□□ -0.34
NEK9-201ENST00000238616 GLOD5A6NK44 160 aa12.9□□□□□ -0.34
NEK9-201ENST00000238616 CSKP41240 450 aa12.9□□□□□ -0.34
NEK9-201ENST00000238616 DCDC1P59894 354 aa12.9□□□□□ -0.34
NEK9-201ENST00000238616 TUSC3Q13454 348 aa12.9□□□□□ -0.34
NEK9-201ENST00000238616 CCSER2Q9H7U1 834 aa12.9□□□□□ -0.34
NEK9-201ENST00000238616 PHLPP1O60346 1717 aa12.9□□□□□ -0.34
NEK9-201ENST00000238616 VILLO15195 856 aa12.9□□□□□ -0.34
NEK9-201ENST00000238616 SH3PXD2AQ5TCZ1 1133 aa12.9□□□□□ -0.34
NEK9-201ENST00000238616 THAP6Q8TBB0 222 aa12.9□□□□□ -0.34
NEK9-201ENST00000238616 TMEM41AQ96HV5 264 aa12.9□□□□□ -0.34
NEK9-201ENST00000238616 PDLIM2Q96JY6 352 aa12.9□□□□□ -0.34
NEK9-201ENST00000238616 COL5A2P05997 1499 aaPredicted RBP12.9□□□□□ -0.34
NEK9-201ENST00000238616 A0A1B0GVM2 712 aa12.9□□□□□ -0.34
NEK9-201ENST00000238616 HTR3EA5X5Y0 456 aa12.9□□□□□ -0.34
NEK9-201ENST00000238616 TCAF2A6NFQ2 919 aa12.9□□□□□ -0.34
NEK9-201ENST00000238616 SOX1O00570 391 aaPredicted RBP12.9□□□□□ -0.34
NEK9-201ENST00000238616 IFNGR1P15260 489 aa12.9□□□□□ -0.34
NEK9-201ENST00000238616 CD53P19397 219 aa12.9□□□□□ -0.34
NEK9-201ENST00000238616 TMEM35AQ53FP2 167 aa12.9□□□□□ -0.34
NEK9-201ENST00000238616 GRHL2Q6ISB3 625 aa12.9□□□□□ -0.34
NEK9-201ENST00000238616 TUBGCP5Q96RT8 1024 aa12.9□□□□□ -0.34
NEK9-201ENST00000238616 SPATA6Q9NWH7 488 aaPredicted RBP12.9□□□□□ -0.34
NEK9-201ENST00000238616 C1orf167Q5SNV9 1468 aa12.9□□□□□ -0.34
NEK9-201ENST00000238616 FRMPD1Q5SYB0 1578 aa12.9□□□□□ -0.34
NEK9-201ENST00000238616 SMIM35A0A1B0GVV1 85 aa12.9□□□□□ -0.34
NEK9-201ENST00000238616 CIB4A0PJX0 185 aa12.9□□□□□ -0.34
NEK9-201ENST00000238616 C8orf89P0DMQ9 161 aa12.9□□□□□ -0.34
NEK9-201ENST00000238616 LEPRP48357 1165 aaKnown RBP12.9□□□□□ -0.34
NEK9-201ENST00000238616 ZNF550Q7Z398 422 aa12.9□□□□□ -0.34
NEK9-201ENST00000238616 PRR18Q8N4B5 295 aa12.9□□□□□ -0.34
NEK9-201ENST00000238616 IL4I1Q96RQ9 567 aa12.9□□□□□ -0.34
NEK9-201ENST00000238616 ETAA1Q9NY74 926 aa12.9□□□□□ -0.34
NEK9-201ENST00000238616 ICKQ9UPZ9 632 aa12.9□□□□□ -0.34
NEK9-201ENST00000238616 PCDH7O60245 1069 aa12.9□□□□□ -0.34
NEK9-201ENST00000238616 MTX2O75431 263 aa12.9□□□□□ -0.34
NEK9-201ENST00000238616 APOBEC3HQ6NTF7 200 aaKnown RBP12.9□□□□□ -0.34
NEK9-201ENST00000238616 PAQR7Q86WK9 346 aa12.9□□□□□ -0.34
NEK9-201ENST00000238616 SPAG16Q8N0X2 631 aa12.9□□□□□ -0.34
NEK9-201ENST00000238616 SPPL2BQ8TCT7 592 aa12.9□□□□□ -0.34
NEK9-201ENST00000238616 SCGB3A2Q96PL1 93 aa12.9□□□□□ -0.34
NEK9-201ENST00000238616 POLR2J2Q9GZM3 115 aaKnown RBP12.9□□□□□ -0.34
NEK9-201ENST00000238616 RCOR3Q9P2K3 495 aaPredicted RBP12.9□□□□□ -0.34
NEK9-201ENST00000238616 A0A1B0GV50 99 aa12.9□□□□□ -0.35
NEK9-201ENST00000238616 B8ZZF3 427 aa12.9□□□□□ -0.35
NEK9-201ENST00000238616 SCGB2A2Q13296 93 aa12.9□□□□□ -0.35
NEK9-201ENST00000238616 ARL9Q6T311 187 aa12.9□□□□□ -0.35
NEK9-201ENST00000238616 LRRN4CLQ8ND94 238 aa12.9□□□□□ -0.35
NEK9-201ENST00000238616 DENND2DQ9H6A0 471 aaPredicted RBP12.9□□□□□ -0.35
NEK9-201ENST00000238616 MTMR10Q9NXD2 777 aa12.9□□□□□ -0.35
NEK9-201ENST00000238616 PRPF19Q9UMS4 504 aaKnown RBP12.9□□□□□ -0.35
NEK9-201ENST00000238616 RGPD5Q99666 1765 aa12.89□□□□□ -0.35
NEK9-201ENST00000238616 SEC16AO15027 2179 aa12.89□□□□□ -0.35
NEK9-201ENST00000238616 HHLA1C9JL84 531 aa12.89□□□□□ -0.35
NEK9-201ENST00000238616 ITGA10O75578 1167 aa12.89□□□□□ -0.35
NEK9-201ENST00000238616 CREB5Q02930 508 aa12.89□□□□□ -0.35
NEK9-201ENST00000238616 BBS12Q6ZW61 710 aa12.89□□□□□ -0.35
NEK9-201ENST00000238616 OR8K3Q8NH51 312 aa12.89□□□□□ -0.35
NEK9-201ENST00000238616 WDR18Q9BV38 432 aa12.89□□□□□ -0.35
NEK9-201ENST00000238616 OR51B6Q9H340 312 aa12.89□□□□□ -0.35
NEK9-201ENST00000238616 ERI3O43414 337 aaKnown RBP12.89□□□□□ -0.35
NEK9-201ENST00000238616 BCHEP06276 602 aa12.89□□□□□ -0.35
NEK9-201ENST00000238616 CYP3A5P20815 502 aa12.89□□□□□ -0.35
NEK9-201ENST00000238616 RBM34P42696 430 aaKnown RBP12.89□□□□□ -0.35
NEK9-201ENST00000238616 SCARB2Q14108 478 aa12.89□□□□□ -0.35
NEK9-201ENST00000238616 PDSS1Q5T2R2 415 aa12.89□□□□□ -0.35
NEK9-201ENST00000238616 SYCE2Q6PIF2 218 aa12.89□□□□□ -0.35
NEK9-201ENST00000238616 PYROXD2Q8N2H3 581 aa12.89□□□□□ -0.35
NEK9-201ENST00000238616 SCLYQ96I15 445 aa12.89□□□□□ -0.35
NEK9-201ENST00000238616 TDP1Q9NUW8 608 aa12.89□□□□□ -0.35
NEK9-201ENST00000238616 P2RX2Q9UBL9 471 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms