RNA–Protein interactions for RNA: ENST00000225696.8

NUP88-201, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 2,194 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-201ENST00000225696 TMEM229AB2RXF0 380 aa12.03□□□□□ -0.48
NUP88-201ENST00000225696 CLIC1O00299 241 aa12.03□□□□□ -0.48
NUP88-201ENST00000225696 STK16O75716 305 aa12.03□□□□□ -0.48
NUP88-201ENST00000225696 ZDHHC11BP0C7U3 371 aa12.03□□□□□ -0.48
NUP88-201ENST00000225696 ATF6P18850 670 aa12.03□□□□□ -0.48
NUP88-201ENST00000225696 TNFRSF1BP20333 461 aa12.03□□□□□ -0.48
NUP88-201ENST00000225696 MAGEA11P43364 429 aa12.03□□□□□ -0.48
NUP88-201ENST00000225696 VMACQ2NL98 169 aa12.03□□□□□ -0.48
NUP88-201ENST00000225696 CXorf57Q6NSI4 855 aaKnown RBP12.03□□□□□ -0.48
NUP88-201ENST00000225696 RGMBQ6NW40 437 aa12.03□□□□□ -0.48
NUP88-201ENST00000225696 FAHD1Q6P587 224 aa12.03□□□□□ -0.48
NUP88-201ENST00000225696 GDPD3Q7L5L3 318 aa12.03□□□□□ -0.48
NUP88-201ENST00000225696 FAM124AQ86V42 546 aa12.03□□□□□ -0.48
NUP88-201ENST00000225696 HORMAD1Q86X24 394 aa12.03□□□□□ -0.48
NUP88-201ENST00000225696 LACC1Q8IV20 430 aa12.03□□□□□ -0.48
NUP88-201ENST00000225696 METTL4Q8N3J2 472 aa12.03□□□□□ -0.48
NUP88-201ENST00000225696 CARNMT1Q8N4J0 409 aa12.03□□□□□ -0.48
NUP88-201ENST00000225696 SELENOMQ8WWX9 145 aa12.03□□□□□ -0.48
NUP88-201ENST00000225696 BHMTQ93088 406 aa12.03□□□□□ -0.48
NUP88-201ENST00000225696 MAL2Q969L2 176 aa12.03□□□□□ -0.48
NUP88-201ENST00000225696 EFHD2Q96C19 240 aaPredicted RBP12.03□□□□□ -0.48
NUP88-201ENST00000225696 Q96MT0 163 aa12.03□□□□□ -0.48
NUP88-201ENST00000225696 CENPOQ9BU64 300 aa12.03□□□□□ -0.48
NUP88-201ENST00000225696 TM6SF2Q9BZW4 377 aa12.03□□□□□ -0.48
NUP88-201ENST00000225696 REXO4Q9GZR2 422 aaKnown RBP12.03□□□□□ -0.48
NUP88-201ENST00000225696 TP63Q9H3D4 680 aaPredicted RBP12.03□□□□□ -0.48
NUP88-201ENST00000225696 TPK1Q9H3S4 243 aa12.03□□□□□ -0.48
NUP88-201ENST00000225696 SP140LQ9H930 580 aa12.03□□□□□ -0.48
NUP88-201ENST00000225696 RLIMQ9NVW2 624 aa12.03□□□□□ -0.48
NUP88-201ENST00000225696 LHX3Q9UBR4 397 aa12.03□□□□□ -0.48
NUP88-201ENST00000225696 TRPS1Q9UHF7 1281 aa12.03□□□□□ -0.48
NUP88-201ENST00000225696 ERVW-1Q9UQF0 538 aa12.03□□□□□ -0.48
NUP88-201ENST00000225696 BTBD3Q9Y2F9 522 aa12.03□□□□□ -0.48
NUP88-201ENST00000225696 Q9Y3F1 56 aa12.03□□□□□ -0.48
NUP88-201ENST00000225696 NOX1Q9Y5S8 564 aa12.03□□□□□ -0.48
NUP88-201ENST00000225696 HSPE1-MOB4S4R3N1 261 aa12.03□□□□□ -0.48
NUP88-201ENST00000225696 E9PQ18 207 aa12.03□□□□□ -0.48
NUP88-201ENST00000225696 TLL1O43897 1013 aa12.03□□□□□ -0.48
NUP88-201ENST00000225696 NUAK1O60285 661 aa12.03□□□□□ -0.48
NUP88-201ENST00000225696 FZD6O60353 706 aa12.03□□□□□ -0.48
NUP88-201ENST00000225696 CLDN9O95484 217 aa12.03□□□□□ -0.48
NUP88-201ENST00000225696 IRF1P10914 325 aa12.03□□□□□ -0.48
NUP88-201ENST00000225696 GJA8P48165 433 aa12.03□□□□□ -0.48
NUP88-201ENST00000225696 ARHGDIAP52565 204 aa12.03□□□□□ -0.48
NUP88-201ENST00000225696 HNRNPFP52597 415 aaKnown RBP12.03□□□□□ -0.48
NUP88-201ENST00000225696 CASP9P55211 416 aa12.03□□□□□ -0.48
NUP88-201ENST00000225696 CYP4F2P78329 520 aa12.03□□□□□ -0.48
NUP88-201ENST00000225696 NFATC2Q13469 925 aa12.03□□□□□ -0.48
NUP88-201ENST00000225696 TP53BP2Q13625 1128 aa12.03□□□□□ -0.48
NUP88-201ENST00000225696 TIGD6Q17RP2 521 aa12.03□□□□□ -0.48
NUP88-201ENST00000225696 TPRG1LQ5T0D9 272 aa12.03□□□□□ -0.48
NUP88-201ENST00000225696 ZNF621Q6ZSS3 439 aa12.03□□□□□ -0.48
NUP88-201ENST00000225696 HEATR4Q86WZ0 1026 aa12.03□□□□□ -0.48
NUP88-201ENST00000225696 STK40Q8N2I9 435 aa12.03□□□□□ -0.48
NUP88-201ENST00000225696 ZBTB2Q8N680 514 aa12.03□□□□□ -0.48
NUP88-201ENST00000225696 ATL1Q8WXF7 558 aa12.03□□□□□ -0.48
NUP88-201ENST00000225696 TBC1D20Q96BZ9 403 aa12.03□□□□□ -0.48
NUP88-201ENST00000225696 C7orf34Q96L11 122 aa12.03□□□□□ -0.48
NUP88-201ENST00000225696 TTPALQ9BTX7 342 aa12.03□□□□□ -0.48
NUP88-201ENST00000225696 RAD18Q9NS91 495 aa12.03□□□□□ -0.48
NUP88-201ENST00000225696 GPR83Q9NYM4 423 aa12.03□□□□□ -0.48
NUP88-201ENST00000225696 PCDHB1Q9Y5F3 818 aa12.03□□□□□ -0.48
NUP88-201ENST00000225696 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.02□□□□□ -0.48
NUP88-201ENST00000225696 ILVBLA1L0T0 632 aa12.02□□□□□ -0.48
NUP88-201ENST00000225696 SCN2BO60939 215 aa12.02□□□□□ -0.48
NUP88-201ENST00000225696 WDR47O94967 919 aa12.02□□□□□ -0.48
NUP88-201ENST00000225696 CLDN7O95471 211 aa12.02□□□□□ -0.48
NUP88-201ENST00000225696 ZNF7P17097 686 aaPredicted RBP12.02□□□□□ -0.48
NUP88-201ENST00000225696 WNT3P56703 355 aa12.02□□□□□ -0.48
NUP88-201ENST00000225696 FOXD4Q12950 439 aaPredicted RBP12.02□□□□□ -0.48
NUP88-201ENST00000225696 ZNF177Q13360 481 aaPredicted RBP12.02□□□□□ -0.48
NUP88-201ENST00000225696 SMU1Q2TAY7 513 aa12.02□□□□□ -0.48
NUP88-201ENST00000225696 GLB1LQ6UWU2 654 aa12.02□□□□□ -0.48
NUP88-201ENST00000225696 SERPINA11Q86U17 422 aa12.02□□□□□ -0.48
NUP88-201ENST00000225696 LINC01599Q8WXQ3 324 aa12.02□□□□□ -0.48
NUP88-201ENST00000225696 GGHQ92820 318 aa12.02□□□□□ -0.48
NUP88-201ENST00000225696 PANX1Q96RD7 426 aa12.02□□□□□ -0.48
NUP88-201ENST00000225696 PITX2Q99697 317 aa12.02□□□□□ -0.48
NUP88-201ENST00000225696 MMP27Q9H306 513 aa12.02□□□□□ -0.48
NUP88-201ENST00000225696 RMI1Q9H9A7 625 aa12.02□□□□□ -0.48
NUP88-201ENST00000225696 TESMINQ9Y4I5 508 aa12.02□□□□□ -0.48
NUP88-201ENST00000225696 MICAL3Q7RTP6 2002 aa12.02□□□□□ -0.49
NUP88-201ENST00000225696 NT5C1B-RDH14C9J2C7 533 aa12.02□□□□□ -0.49
NUP88-201ENST00000225696 GFRA2O00451 464 aa12.02□□□□□ -0.49
NUP88-201ENST00000225696 FPGTO14772 594 aa12.02□□□□□ -0.49
NUP88-201ENST00000225696 DUSP11O75319 330 aaKnown RBP12.02□□□□□ -0.49
NUP88-201ENST00000225696 CLDN11O75508 207 aa12.02□□□□□ -0.49
NUP88-201ENST00000225696 CPSF4O95639 269 aaKnown RBP12.02□□□□□ -0.49
NUP88-201ENST00000225696 PTHP01270 115 aa12.02□□□□□ -0.49
NUP88-201ENST00000225696 IGHA2P01877 340 aa12.02□□□□□ -0.49
NUP88-201ENST00000225696 NTRK1P04629 796 aa12.02□□□□□ -0.49
NUP88-201ENST00000225696 STSP08842 583 aa12.02□□□□□ -0.49
NUP88-201ENST00000225696 AKR1A1P14550 325 aa12.02□□□□□ -0.49
NUP88-201ENST00000225696 ALOX12P18054 663 aa12.02□□□□□ -0.49
NUP88-201ENST00000225696 DGKAP23743 735 aa12.02□□□□□ -0.49
NUP88-201ENST00000225696 CORO1AP31146 461 aaKnown RBP12.02□□□□□ -0.49
NUP88-201ENST00000225696 CASP3P42574 277 aa12.02□□□□□ -0.49
NUP88-201ENST00000225696 CTSKP43235 329 aa12.02□□□□□ -0.49
NUP88-201ENST00000225696 RGS4P49798 205 aa12.02□□□□□ -0.49
NUP88-201ENST00000225696 CHRNA6Q15825 494 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms