RNA–Protein interactions for RNA: ENST00000225655.5

PFN1-201, Transcript of profilin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFN1, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFN1-201ENST00000225655 OR2B3O76000 313 aa17.31■□□□□ 0.36
PFN1-201ENST00000225655 AGXTP21549 392 aa17.31■□□□□ 0.36
PFN1-201ENST00000225655 CRABP2P29373 138 aa17.31■□□□□ 0.36
PFN1-201ENST00000225655 CCNFP41002 786 aa17.31■□□□□ 0.36
PFN1-201ENST00000225655 SERPINB8P50452 374 aa17.31■□□□□ 0.36
PFN1-201ENST00000225655 PGDP52209 483 aa17.31■□□□□ 0.36
PFN1-201ENST00000225655 CHAF1BQ13112 559 aa17.31■□□□□ 0.36
PFN1-201ENST00000225655 KIR2DS3Q14952 304 aa17.31■□□□□ 0.36
PFN1-201ENST00000225655 SLC5A12Q1EHB4 618 aa17.31■□□□□ 0.36
PFN1-201ENST00000225655 COLEC12Q5KU26 742 aa17.31■□□□□ 0.36
PFN1-201ENST00000225655 RAPH1Q70E73 1250 aa17.31■□□□□ 0.36
PFN1-201ENST00000225655 RAB42Q8N4Z0 105 aa17.31■□□□□ 0.36
PFN1-201ENST00000225655 MREGQ8N565 214 aa17.31■□□□□ 0.36
PFN1-201ENST00000225655 NKAPQ8N5F7 415 aaKnown RBP17.31■□□□□ 0.36
PFN1-201ENST00000225655 MYRIPQ8NFW9 859 aa17.31■□□□□ 0.36
PFN1-201ENST00000225655 MTBPQ96DY7 904 aa17.31■□□□□ 0.36
PFN1-201ENST00000225655 MCMBPQ9BTE3 642 aa17.31■□□□□ 0.36
PFN1-201ENST00000225655 SLC25A23Q9BV35 468 aa17.31■□□□□ 0.36
PFN1-201ENST00000225655 GPAMQ9HCL2 828 aa17.31■□□□□ 0.36
PFN1-201ENST00000225655 PSMC3IPQ9P2W1 217 aaPredicted RBP17.31■□□□□ 0.36
PFN1-201ENST00000225655 PLAGL1Q9UM63 463 aa17.31■□□□□ 0.36
PFN1-201ENST00000225655 CDYLQ9Y232 598 aa17.31■□□□□ 0.36
PFN1-201ENST00000225655 MTO1Q9Y2Z2 717 aaKnown RBP17.31■□□□□ 0.36
PFN1-201ENST00000225655 FER1L5A0AVI2 2057 aa17.31■□□□□ 0.36
PFN1-201ENST00000225655 IQANK1A0A1B0GTG1 560 aa17.3■□□□□ 0.36
PFN1-201ENST00000225655 C9J4A7 227 aa17.3■□□□□ 0.36
PFN1-201ENST00000225655 CTIFO43310 598 aaKnown RBP17.3■□□□□ 0.36
PFN1-201ENST00000225655 CEACAM4O75871 244 aa17.3■□□□□ 0.36
PFN1-201ENST00000225655 FAM155BO75949 473 aa17.3■□□□□ 0.36
PFN1-201ENST00000225655 CATP04040 527 aaKnown RBP17.3■□□□□ 0.36
PFN1-201ENST00000225655 MPC1LP0DKB6 136 aa17.3■□□□□ 0.36
PFN1-201ENST00000225655 PKLRP30613 574 aa17.3■□□□□ 0.36
PFN1-201ENST00000225655 RAB28P51157 221 aa17.3■□□□□ 0.36
PFN1-201ENST00000225655 CCL11P51671 97 aa17.3■□□□□ 0.36
PFN1-201ENST00000225655 TAS2R39P59534 338 aa17.3■□□□□ 0.36
PFN1-201ENST00000225655 RAB10P61026 200 aa17.3■□□□□ 0.36
PFN1-201ENST00000225655 ACSBG2Q5FVE4 666 aa17.3■□□□□ 0.36
PFN1-201ENST00000225655 UBAP2Q5T6F2 1119 aaKnown RBP17.3■□□□□ 0.36
PFN1-201ENST00000225655 MROH9Q5TGP6 573 aa17.3■□□□□ 0.36
PFN1-201ENST00000225655 VRK3Q8IV63 474 aa17.3■□□□□ 0.36
PFN1-201ENST00000225655 CPNE9Q8IYJ1 553 aa17.3■□□□□ 0.36
PFN1-201ENST00000225655 CFAP61Q8NHU2 1237 aa17.3■□□□□ 0.36
PFN1-201ENST00000225655 MIB2Q96AX9 1013 aa17.3■□□□□ 0.36
PFN1-201ENST00000225655 LINGO1Q96FE5 620 aa17.3■□□□□ 0.36
PFN1-201ENST00000225655 C17orf62Q9BQA9 187 aa17.3■□□□□ 0.36
PFN1-201ENST00000225655 DHRS4Q9BTZ2 278 aa17.3■□□□□ 0.36
PFN1-201ENST00000225655 PLAAQ9Y263 795 aa17.3■□□□□ 0.36
PFN1-201ENST00000225655 PADI2Q9Y2J8 665 aa17.3■□□□□ 0.36
PFN1-201ENST00000225655 MED16Q9Y2X0 877 aa17.3■□□□□ 0.36
PFN1-201ENST00000225655 ISM1B1AKI9 464 aa17.29■□□□□ 0.36
PFN1-201ENST00000225655 ZSCAN9O15535 394 aaPredicted RBP17.29■□□□□ 0.36
PFN1-201ENST00000225655 HCRTR1O43613 425 aa17.29■□□□□ 0.36
PFN1-201ENST00000225655 NUDT17P0C025 328 aa17.29■□□□□ 0.36
PFN1-201ENST00000225655 PEBP1P30086 187 aaKnown RBP17.29■□□□□ 0.36
PFN1-201ENST00000225655 CD97P48960 835 aa17.29■□□□□ 0.36
PFN1-201ENST00000225655 GBX1Q14549 363 aa17.29■□□□□ 0.36
PFN1-201ENST00000225655 DEFB110Q30KQ9 67 aa17.29■□□□□ 0.36
PFN1-201ENST00000225655 FAM69BQ5VUD6 431 aa17.29■□□□□ 0.36
PFN1-201ENST00000225655 RHBDD2Q6NTF9 364 aa17.29■□□□□ 0.36
PFN1-201ENST00000225655 PAQR3Q6TCH7 311 aa17.29■□□□□ 0.36
PFN1-201ENST00000225655 MED25Q71SY5 747 aa17.29■□□□□ 0.36
PFN1-201ENST00000225655 DCUN1D3Q8IWE4 304 aa17.29■□□□□ 0.36
PFN1-201ENST00000225655 DNAJC22Q8N4W6 341 aa17.29■□□□□ 0.36
PFN1-201ENST00000225655 GIMAP7Q8NHV1 300 aa17.29■□□□□ 0.36
PFN1-201ENST00000225655 OLFM1Q99784 485 aa17.29■□□□□ 0.36
PFN1-201ENST00000225655 MENTQ9BUN1 341 aa17.29■□□□□ 0.36
PFN1-201ENST00000225655 SPRTNQ9H040 489 aaPredicted RBP17.29■□□□□ 0.36
PFN1-201ENST00000225655 EPB41L4BQ9H329 900 aa17.29■□□□□ 0.36
PFN1-201ENST00000225655 GALPQ9UBC7 116 aa17.29■□□□□ 0.36
PFN1-201ENST00000225655 TSR3Q9UJK0 312 aaKnown RBP17.29■□□□□ 0.36
PFN1-201ENST00000225655 A0A087X1B8 175 aa17.28■□□□□ 0.36
PFN1-201ENST00000225655 KLF7O75840 302 aaPredicted RBP17.28■□□□□ 0.36
PFN1-201ENST00000225655 C8GP07360 202 aa17.28■□□□□ 0.36
PFN1-201ENST00000225655 SNRPAP09012 282 aaKnown RBP17.28■□□□□ 0.36
PFN1-201ENST00000225655 ZNF37AP17032 561 aaPredicted RBP17.28■□□□□ 0.36
PFN1-201ENST00000225655 TYK2P29597 1187 aa17.28■□□□□ 0.36
PFN1-201ENST00000225655 SP140Q13342 867 aa17.28■□□□□ 0.36
PFN1-201ENST00000225655 BMPR2Q13873 1038 aa17.28■□□□□ 0.36
PFN1-201ENST00000225655 TLDC1Q6P9B6 456 aa17.28■□□□□ 0.36
PFN1-201ENST00000225655 ADGRD1Q6QNK2 874 aa17.28■□□□□ 0.36
PFN1-201ENST00000225655 TBC1D1Q86TI0 1168 aaPredicted RBP17.28■□□□□ 0.36
PFN1-201ENST00000225655 TMEM102Q8N9M5 508 aaPredicted RBP17.28■□□□□ 0.36
PFN1-201ENST00000225655 PROKR1Q8TCW9 393 aa17.28■□□□□ 0.36
PFN1-201ENST00000225655 DCAKDQ8WVC6 231 aa17.28■□□□□ 0.36
PFN1-201ENST00000225655 TSNARE1Q96NA8 513 aa17.28■□□□□ 0.36
PFN1-201ENST00000225655 GBP5Q96PP8 586 aa17.28■□□□□ 0.36
PFN1-201ENST00000225655 RAB11FIP5Q9BXF6 653 aa17.28■□□□□ 0.36
PFN1-201ENST00000225655 TRIM54Q9BYV2 358 aa17.28■□□□□ 0.36
PFN1-201ENST00000225655 CAB39LQ9H9S4 337 aa17.28■□□□□ 0.36
PFN1-201ENST00000225655 SRPK3Q9UPE1 567 aa17.28■□□□□ 0.36
PFN1-201ENST00000225655 PLCL2Q9UPR0 1127 aa17.28■□□□□ 0.36
PFN1-201ENST00000225655 PCDHGB7Q9Y5F8 929 aa17.28■□□□□ 0.36
PFN1-201ENST00000225655 DOPEY2Q9Y3R5 2298 aa17.27■□□□□ 0.36
PFN1-201ENST00000225655 CLEC18AA5D8T8 446 aa17.27■□□□□ 0.36
PFN1-201ENST00000225655 ZBTB14O43829 449 aa17.27■□□□□ 0.36
PFN1-201ENST00000225655 SLC26A3P40879 764 aa17.27■□□□□ 0.36
PFN1-201ENST00000225655 RRADP55042 308 aa17.27■□□□□ 0.36
PFN1-201ENST00000225655 MLLT10P55197 1068 aa17.27■□□□□ 0.36
PFN1-201ENST00000225655 UBAP2LQ14157 1087 aaKnown RBP17.27■□□□□ 0.36
PFN1-201ENST00000225655 GRB7Q14451 532 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms