RNA–Protein interactions for RNA: ENST00000204961.4

EFNB1-201, Transcript of ephrin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1-201ENST00000204961 LHCGRP22888 699 aa14.64□□□□□ -0.07
EFNB1-201ENST00000204961 GTF2E2P29084 291 aaKnown RBP14.64□□□□□ -0.07
EFNB1-201ENST00000204961 ARHGDIAP52565 204 aa14.64□□□□□ -0.07
EFNB1-201ENST00000204961 CDK5R2Q13319 367 aa14.64□□□□□ -0.07
EFNB1-201ENST00000204961 DMC1Q14565 340 aa14.64□□□□□ -0.07
EFNB1-201ENST00000204961 LAIR2Q6ISS4 152 aa14.64□□□□□ -0.07
EFNB1-201ENST00000204961 HSH2DQ96JZ2 352 aa14.64□□□□□ -0.07
EFNB1-201ENST00000204961 SIRT5Q9NXA8 310 aa14.64□□□□□ -0.07
EFNB1-201ENST00000204961 PLAGL1Q9UM63 463 aa14.64□□□□□ -0.07
EFNB1-201ENST00000204961 FAM92AA1XBS5 289 aa14.64□□□□□ -0.07
EFNB1-201ENST00000204961 J3KTA2 159 aa14.64□□□□□ -0.07
EFNB1-201ENST00000204961 CLPXO76031 633 aa14.64□□□□□ -0.07
EFNB1-201ENST00000204961 SERPIND1P05546 499 aa14.64□□□□□ -0.07
EFNB1-201ENST00000204961 SELPP16109 830 aa14.64□□□□□ -0.07
EFNB1-201ENST00000204961 ACRV1P26436 265 aa14.64□□□□□ -0.07
EFNB1-201ENST00000204961 DCKP27707 260 aa14.64□□□□□ -0.07
EFNB1-201ENST00000204961 DAPP51397 102 aa14.64□□□□□ -0.07
EFNB1-201ENST00000204961 DAB2P98082 770 aa14.64□□□□□ -0.07
EFNB1-201ENST00000204961 SP3Q02447 781 aa14.64□□□□□ -0.07
EFNB1-201ENST00000204961 ADPRMQ3LIE5 342 aa14.64□□□□□ -0.07
EFNB1-201ENST00000204961 RUNDC3AQ59EK9 446 aa14.64□□□□□ -0.07
EFNB1-201ENST00000204961 COLEC12Q5KU26 742 aa14.64□□□□□ -0.07
EFNB1-201ENST00000204961 MMP21Q8N119 569 aa14.64□□□□□ -0.07
EFNB1-201ENST00000204961 UBE2J2Q8N2K1 259 aa14.64□□□□□ -0.07
EFNB1-201ENST00000204961 NXPE1Q8N323 547 aa14.64□□□□□ -0.07
EFNB1-201ENST00000204961 C7orf57Q8NEG2 295 aa14.64□□□□□ -0.07
EFNB1-201ENST00000204961 NELL1Q92832 810 aa14.64□□□□□ -0.07
EFNB1-201ENST00000204961 LINC00597Q9H2U6 94 aa14.64□□□□□ -0.07
EFNB1-201ENST00000204961 TPK1Q9H3S4 243 aa14.64□□□□□ -0.07
EFNB1-201ENST00000204961 KAT8Q9H7Z6 458 aaKnown RBP14.64□□□□□ -0.07
EFNB1-201ENST00000204961 POPDC3Q9HBV1 291 aa14.64□□□□□ -0.07
EFNB1-201ENST00000204961 B4GALT6Q9UBX8 382 aa14.64□□□□□ -0.07
EFNB1-201ENST00000204961 CA12O43570 354 aa14.64□□□□□ -0.07
EFNB1-201ENST00000204961 NME6O75414 186 aaPredicted RBP14.64□□□□□ -0.07
EFNB1-201ENST00000204961 XPAP23025 273 aaPredicted RBP14.64□□□□□ -0.07
EFNB1-201ENST00000204961 CREMQ03060 361 aa14.64□□□□□ -0.07
EFNB1-201ENST00000204961 ACSM2AQ08AH3 577 aa14.64□□□□□ -0.07
EFNB1-201ENST00000204961 ACSM2BQ68CK6 577 aa14.64□□□□□ -0.07
EFNB1-201ENST00000204961 ZNF852Q6ZMS4 543 aa14.64□□□□□ -0.07
EFNB1-201ENST00000204961 HEATR4Q86WZ0 1026 aa14.64□□□□□ -0.07
EFNB1-201ENST00000204961 P3H2Q8IVL5 708 aa14.64□□□□□ -0.07
EFNB1-201ENST00000204961 C1orf52Q8N6N3 182 aaKnown RBP14.64□□□□□ -0.07
EFNB1-201ENST00000204961 ISG20Q96AZ6 181 aaKnown RBP14.64□□□□□ -0.07
EFNB1-201ENST00000204961 DUS3LQ96G46 650 aaKnown RBP14.64□□□□□ -0.07
EFNB1-201ENST00000204961 SAMD11Q96NU1 681 aa14.64□□□□□ -0.07
EFNB1-201ENST00000204961 RBM4BQ9BQ04 359 aaKnown RBP14.64□□□□□ -0.07
EFNB1-201ENST00000204961 NEURL2Q9BR09 285 aa14.64□□□□□ -0.07
EFNB1-201ENST00000204961 C2orf49Q9BVC5 232 aaPredicted RBP14.64□□□□□ -0.07
EFNB1-201ENST00000204961 RBM4Q9BWF3 364 aaKnown RBP14.64□□□□□ -0.07
EFNB1-201ENST00000204961 HEBP1Q9NRV9 189 aa14.64□□□□□ -0.07
EFNB1-201ENST00000204961 INTS6Q9UL03 887 aaKnown RBP14.64□□□□□ -0.07
EFNB1-201ENST00000204961 E7EQ34 232 aa14.63□□□□□ -0.07
EFNB1-201ENST00000204961 H7C4K7 107 aa14.63□□□□□ -0.07
EFNB1-201ENST00000204961 CCL16O15467 120 aa14.63□□□□□ -0.07
EFNB1-201ENST00000204961 TBX1O43435 398 aa14.63□□□□□ -0.07
EFNB1-201ENST00000204961 ACRP10323 421 aa14.63□□□□□ -0.07
EFNB1-201ENST00000204961 SPAM1P38567 509 aa14.63□□□□□ -0.07
EFNB1-201ENST00000204961 CRISP3P54108 245 aa14.63□□□□□ -0.07
EFNB1-201ENST00000204961 FOXM1Q08050 763 aa14.63□□□□□ -0.07
EFNB1-201ENST00000204961 STK40Q8N2I9 435 aa14.63□□□□□ -0.07
EFNB1-201ENST00000204961 PYURFQ96I23 114 aa14.63□□□□□ -0.07
EFNB1-201ENST00000204961 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.63□□□□□ -0.07
EFNB1-201ENST00000204961 TBCCD1Q9NVR7 557 aa14.63□□□□□ -0.07
EFNB1-201ENST00000204961 NEUROG3Q9Y4Z2 214 aa14.63□□□□□ -0.07
EFNB1-201ENST00000204961 CACNA1CQ13936 2221 aa14.63□□□□□ -0.07
EFNB1-201ENST00000204961 SCN2AQ99250 2005 aa14.63□□□□□ -0.07
EFNB1-201ENST00000204961 PRR23AA6NEV1 266 aa14.63□□□□□ -0.07
EFNB1-201ENST00000204961 APOL3O95236 402 aa14.63□□□□□ -0.07
EFNB1-201ENST00000204961 INHAP05111 366 aa14.63□□□□□ -0.07
EFNB1-201ENST00000204961 RCVRNP35243 200 aa14.63□□□□□ -0.07
EFNB1-201ENST00000204961 FEN1P39748 380 aaKnown RBP14.63□□□□□ -0.07
EFNB1-201ENST00000204961 ALDH9A1P49189 494 aa14.63□□□□□ -0.07
EFNB1-201ENST00000204961 GPNMBQ14956 572 aa14.63□□□□□ -0.07
EFNB1-201ENST00000204961 B3GNT8Q7Z7M8 397 aa14.63□□□□□ -0.07
EFNB1-201ENST00000204961 TMEM25Q86YD3 366 aa14.63□□□□□ -0.07
EFNB1-201ENST00000204961 Q8N9G6 341 aaPredicted RBP14.63□□□□□ -0.07
EFNB1-201ENST00000204961 OR51B5Q9H339 312 aa14.63□□□□□ -0.07
EFNB1-201ENST00000204961 ZBTB20Q9HC78 741 aaPredicted RBP14.63□□□□□ -0.07
EFNB1-201ENST00000204961 CACNA1IQ9P0X4 2223 aa14.63□□□□□ -0.07
EFNB1-201ENST00000204961 HTR3EA5X5Y0 456 aa14.63□□□□□ -0.07
EFNB1-201ENST00000204961 MAGEB17A8MXT2 336 aa14.63□□□□□ -0.07
EFNB1-201ENST00000204961 ZNF99A8MXY4 864 aaPredicted RBP14.63□□□□□ -0.07
EFNB1-201ENST00000204961 PDHA2P29803 388 aa14.63□□□□□ -0.07
EFNB1-201ENST00000204961 CDH12P55289 794 aa14.63□□□□□ -0.07
EFNB1-201ENST00000204961 ISL1P61371 349 aa14.63□□□□□ -0.07
EFNB1-201ENST00000204961 B4GALNT1Q00973 533 aa14.63□□□□□ -0.07
EFNB1-201ENST00000204961 BTG3Q14201 252 aaPredicted RBP14.63□□□□□ -0.07
EFNB1-201ENST00000204961 CATSPEREQ5SY80 951 aa14.63□□□□□ -0.07
EFNB1-201ENST00000204961 GPRC6AQ5T6X5 926 aa14.63□□□□□ -0.07
EFNB1-201ENST00000204961 TMPRSS11BQ86T26 416 aa14.63□□□□□ -0.07
EFNB1-201ENST00000204961 NPAS4Q8IUM7 802 aa14.63□□□□□ -0.07
EFNB1-201ENST00000204961 ING5Q8WYH8 240 aa14.63□□□□□ -0.07
EFNB1-201ENST00000204961 CHCHD6Q9BRQ6 235 aa14.63□□□□□ -0.07
EFNB1-201ENST00000204961 ATP13A3Q9H7F0 1226 aa14.63□□□□□ -0.07
EFNB1-201ENST00000204961 BRD9Q9H8M2 597 aa14.63□□□□□ -0.07
EFNB1-201ENST00000204961 MAGEE1Q9HCI5 957 aa14.63□□□□□ -0.07
EFNB1-201ENST00000204961 TMEM184CQ9NVA4 438 aa14.63□□□□□ -0.07
EFNB1-201ENST00000204961 RLIMQ9NVW2 624 aa14.63□□□□□ -0.07
EFNB1-201ENST00000204961 PATJQ8NI35 1801 aa14.62□□□□□ -0.07
EFNB1-201ENST00000204961 TULP3O75386 442 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms