RNA–Protein interactions for RNA: ENST00000162749.6

TNFRSF1A-201, Transcript of TNF receptor superfamily member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1A, Length 2,223 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-201ENST00000162749 SEC22BO75396 215 aa19.01■□□□□ 0.63
TNFRSF1A-201ENST00000162749 SLC22A3O75751 556 aa19.01■□□□□ 0.63
TNFRSF1A-201ENST00000162749 SMNDC1O75940 238 aaKnown RBP eCLIP19.01■□□□□ 0.63
TNFRSF1A-201ENST00000162749 RSL1D1O76021 490 aaKnown RBP19.01■□□□□ 0.63
TNFRSF1A-201ENST00000162749 VPS26BQ4G0F5 336 aa19.01■□□□□ 0.63
TNFRSF1A-201ENST00000162749 THEMIS2Q5TEJ8 643 aa19.01■□□□□ 0.63
TNFRSF1A-201ENST00000162749 CYP20A1Q6UW02 462 aa19.01■□□□□ 0.63
TNFRSF1A-201ENST00000162749 DHDDSQ86SQ9 333 aa19.01■□□□□ 0.63
TNFRSF1A-201ENST00000162749 PGAM4Q8N0Y7 254 aa19.01■□□□□ 0.63
TNFRSF1A-201ENST00000162749 SLC22A18ASQ8N1D0 253 aa19.01■□□□□ 0.63
TNFRSF1A-201ENST00000162749 OR13H1Q8NG92 308 aa19.01■□□□□ 0.63
TNFRSF1A-201ENST00000162749 FERD3LQ96RJ6 166 aa19.01■□□□□ 0.63
TNFRSF1A-201ENST00000162749 WDR41Q9HAD4 459 aa19.01■□□□□ 0.63
TNFRSF1A-201ENST00000162749 ZBTB32Q9Y2Y4 487 aaPredicted RBP19.01■□□□□ 0.63
TNFRSF1A-201ENST00000162749 DYRK1BQ9Y463 629 aa19.01■□□□□ 0.63
TNFRSF1A-201ENST00000162749 IGHV1OR15-9A0A0B4J2B8 117 aa19■□□□□ 0.63
TNFRSF1A-201ENST00000162749 H3BNX3 289 aa19■□□□□ 0.63
TNFRSF1A-201ENST00000162749 PRPH2P23942 346 aa19■□□□□ 0.63
TNFRSF1A-201ENST00000162749 CTBSQ01459 385 aa19■□□□□ 0.63
TNFRSF1A-201ENST00000162749 MAD2L1Q13257 205 aaPredicted RBP19■□□□□ 0.63
TNFRSF1A-201ENST00000162749 TCEA2Q15560 299 aa19■□□□□ 0.63
TNFRSF1A-201ENST00000162749 CYP2A13Q16696 494 aa19■□□□□ 0.63
TNFRSF1A-201ENST00000162749 PIGGQ5H8A4 983 aa19■□□□□ 0.63
TNFRSF1A-201ENST00000162749 PRAMEF14Q5SWL7 426 aa19■□□□□ 0.63
TNFRSF1A-201ENST00000162749 PRAMEF13Q5VWM6 474 aa19■□□□□ 0.63
TNFRSF1A-201ENST00000162749 ADNP2Q6IQ32 1131 aa19■□□□□ 0.63
TNFRSF1A-201ENST00000162749 RETREG3Q86VR2 466 aa19■□□□□ 0.63
TNFRSF1A-201ENST00000162749 ZFAND4Q86XD8 727 aa19■□□□□ 0.63
TNFRSF1A-201ENST00000162749 SLC5A11Q8WWX8 675 aa19■□□□□ 0.63
TNFRSF1A-201ENST00000162749 MIEF2Q96C03 454 aa19■□□□□ 0.63
TNFRSF1A-201ENST00000162749 WDR34Q96EX3 536 aa19■□□□□ 0.63
TNFRSF1A-201ENST00000162749 MTERF1Q99551 399 aaKnown RBP19■□□□□ 0.63
TNFRSF1A-201ENST00000162749 TBC1D17Q9HA65 648 aa19■□□□□ 0.63
TNFRSF1A-201ENST00000162749 TBC1D29Q9UFV1 150 aa19■□□□□ 0.63
TNFRSF1A-201ENST00000162749 DMTF1Q9Y222 760 aa19■□□□□ 0.63
TNFRSF1A-201ENST00000162749 A0A0C4DFX4 3053 aa19■□□□□ 0.63
TNFRSF1A-201ENST00000162749 NPIPB8E9PQR5 432 aa19■□□□□ 0.63
TNFRSF1A-201ENST00000162749 AK4P27144 223 aaPredicted RBP19■□□□□ 0.63
TNFRSF1A-201ENST00000162749 IL12AP29459 219 aa19■□□□□ 0.63
TNFRSF1A-201ENST00000162749 HSD17B2P37059 387 aa19■□□□□ 0.63
TNFRSF1A-201ENST00000162749 PXNP49023 591 aaPredicted RBP19■□□□□ 0.63
TNFRSF1A-201ENST00000162749 ZNF33BQ06732 778 aa19■□□□□ 0.63
TNFRSF1A-201ENST00000162749 PTGR1Q14914 329 aa19■□□□□ 0.63
TNFRSF1A-201ENST00000162749 ZNF423Q2M1K9 1284 aa19■□□□□ 0.63
TNFRSF1A-201ENST00000162749 ATG9BQ674R7 924 aa19■□□□□ 0.63
TNFRSF1A-201ENST00000162749 IZUMO2Q6UXV1 221 aa19■□□□□ 0.63
TNFRSF1A-201ENST00000162749 OR7G3Q8NG95 312 aa19■□□□□ 0.63
TNFRSF1A-201ENST00000162749 CCL4L1Q8NHW4 92 aa19■□□□□ 0.63
TNFRSF1A-201ENST00000162749 SETD7Q8WTS6 366 aaKnown RBP19■□□□□ 0.63
TNFRSF1A-201ENST00000162749 TMEM168Q9H0V1 697 aa19■□□□□ 0.63
TNFRSF1A-201ENST00000162749 EHD1Q9H4M9 534 aa19■□□□□ 0.63
TNFRSF1A-201ENST00000162749 SCHIP1Q9P0W5 487 aaPredicted RBP19■□□□□ 0.63
TNFRSF1A-201ENST00000162749 PCDHGA11Q9Y5H2 935 aa19■□□□□ 0.63
TNFRSF1A-201ENST00000162749 MYO15AQ9UKN7 3530 aa18.99■□□□□ 0.63
TNFRSF1A-201ENST00000162749 C19orf67A6NJJ6 358 aa18.99■□□□□ 0.63
TNFRSF1A-201ENST00000162749 BBIP1A8MTZ0 92 aa18.99■□□□□ 0.63
TNFRSF1A-201ENST00000162749 MRASO14807 208 aa18.99■□□□□ 0.63
TNFRSF1A-201ENST00000162749 RABIFP47224 123 aa18.99■□□□□ 0.63
TNFRSF1A-201ENST00000162749 CEACAM7Q14002 265 aa18.99■□□□□ 0.63
TNFRSF1A-201ENST00000162749 ALG11Q2TAA5 492 aa18.99■□□□□ 0.63
TNFRSF1A-201ENST00000162749 LCTLQ6UWM7 567 aa18.99■□□□□ 0.63
TNFRSF1A-201ENST00000162749 BNC2Q6ZN30 1099 aaPredicted RBP18.99■□□□□ 0.63
TNFRSF1A-201ENST00000162749 LINC01555Q8NAE3 123 aa18.99■□□□□ 0.63
TNFRSF1A-201ENST00000162749 SPDL1Q96EA4 605 aa18.99■□□□□ 0.63
TNFRSF1A-201ENST00000162749 ACAT2Q9BWD1 397 aa18.99■□□□□ 0.63
TNFRSF1A-201ENST00000162749 ASIC5Q9NY37 505 aa18.99■□□□□ 0.63
TNFRSF1A-201ENST00000162749 SPATA7Q9P0W8 599 aa18.99■□□□□ 0.63
TNFRSF1A-201ENST00000162749 EIF3LQ9Y262 564 aaKnown RBP18.99■□□□□ 0.63
TNFRSF1A-201ENST00000162749 SPAG17Q6Q759 2223 aa18.99■□□□□ 0.63
TNFRSF1A-201ENST00000162749 NUP214P35658 2090 aaPredicted RBP18.99■□□□□ 0.63
TNFRSF1A-201ENST00000162749 MDC1Q14676 2089 aaKnown RBP18.99■□□□□ 0.63
TNFRSF1A-201ENST00000162749 A6NHS1 94 aa18.98■□□□□ 0.63
TNFRSF1A-201ENST00000162749 TOR1BO14657 336 aa18.98■□□□□ 0.63
TNFRSF1A-201ENST00000162749 KIF1CO43896 1103 aaKnown RBP18.98■□□□□ 0.63
TNFRSF1A-201ENST00000162749 EML2O95834 649 aa18.98■□□□□ 0.63
TNFRSF1A-201ENST00000162749 SRP54P61011 504 aaKnown RBP18.98■□□□□ 0.63
TNFRSF1A-201ENST00000162749 YBX1P67809 324 aaKnown RBP18.98■□□□□ 0.63
TNFRSF1A-201ENST00000162749 KLC1Q07866 573 aa18.98■□□□□ 0.63
TNFRSF1A-201ENST00000162749 CSTF3Q12996 717 aaKnown RBP18.98■□□□□ 0.63
TNFRSF1A-201ENST00000162749 DDX39BQ13838 428 aaKnown RBP18.98■□□□□ 0.63
TNFRSF1A-201ENST00000162749 IRGCQ6NXR0 463 aa18.98■□□□□ 0.63
TNFRSF1A-201ENST00000162749 MAFAQ8NHW3 353 aaPredicted RBP18.98■□□□□ 0.63
TNFRSF1A-201ENST00000162749 TSPEARQ8WU66 669 aa18.98■□□□□ 0.63
TNFRSF1A-201ENST00000162749 CAMK1GQ96NX5 476 aa18.98■□□□□ 0.63
TNFRSF1A-201ENST00000162749 ECSITQ9BQ95 431 aa18.98■□□□□ 0.63
TNFRSF1A-201ENST00000162749 ORAI3Q9BRQ5 295 aa18.98■□□□□ 0.63
TNFRSF1A-201ENST00000162749 CHRDQ9H2X0 955 aa18.98■□□□□ 0.63
TNFRSF1A-201ENST00000162749 TMEM45AQ9NWC5 275 aa18.98■□□□□ 0.63
TNFRSF1A-201ENST00000162749 SLCO1B1Q9Y6L6 691 aa18.98■□□□□ 0.63
TNFRSF1A-201ENST00000162749 A0A1W2PPC4 97 aa18.98■□□□□ 0.63
TNFRSF1A-201ENST00000162749 ANGPT2O15123 496 aa18.98■□□□□ 0.63
TNFRSF1A-201ENST00000162749 CFLARO15519 480 aa18.98■□□□□ 0.63
TNFRSF1A-201ENST00000162749 C1GALT1C1LP0DN25 315 aa18.98■□□□□ 0.63
TNFRSF1A-201ENST00000162749 JAK1P23458 1154 aa18.98■□□□□ 0.63
TNFRSF1A-201ENST00000162749 POLR2JP52435 117 aaKnown RBP18.98■□□□□ 0.63
TNFRSF1A-201ENST00000162749 KCNK10P57789 538 aa18.98■□□□□ 0.63
TNFRSF1A-201ENST00000162749 RPE65Q16518 533 aa18.98■□□□□ 0.63
TNFRSF1A-201ENST00000162749 PJA1Q8NG27 643 aa18.98■□□□□ 0.63
TNFRSF1A-201ENST00000162749 VPS33AQ96AX1 596 aa18.98■□□□□ 0.63
TNFRSF1A-201ENST00000162749 SERPINI1Q99574 410 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms