RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 NPRL3Q12980 569 aa13.62□□□□□ -0.23
USH1C-201ENST00000005226 KEAP1Q14145 624 aa13.62□□□□□ -0.23
USH1C-201ENST00000005226 CCDC92Q53HC0 331 aaPredicted RBP13.62□□□□□ -0.23
USH1C-201ENST00000005226 ATAD3BQ5T9A4 648 aa13.62□□□□□ -0.23
USH1C-201ENST00000005226 PTOV1Q86YD1 416 aa13.62□□□□□ -0.23
USH1C-201ENST00000005226 RAVER1Q8IY67 606 aaKnown RBP13.62□□□□□ -0.23
USH1C-201ENST00000005226 ZZZ3Q8IYH5 903 aa13.62□□□□□ -0.23
USH1C-201ENST00000005226 SCAIQ8N9R8 606 aa13.62□□□□□ -0.23
USH1C-201ENST00000005226 OR52J3Q8NH60 311 aa13.62□□□□□ -0.23
USH1C-201ENST00000005226 BBS2Q9BXC9 721 aa13.62□□□□□ -0.23
USH1C-201ENST00000005226 ATG10Q9H0Y0 220 aa13.62□□□□□ -0.23
USH1C-201ENST00000005226 RMND5AQ9H871 391 aa13.62□□□□□ -0.23
USH1C-201ENST00000005226 ZFYVE1Q9HBF4 777 aa13.62□□□□□ -0.23
USH1C-201ENST00000005226 PRM3Q9NNZ6 103 aa13.62□□□□□ -0.23
USH1C-201ENST00000005226 C2orf78A6NCI8 922 aa13.62□□□□□ -0.23
USH1C-201ENST00000005226 EVPLLA8MZ36 301 aa13.62□□□□□ -0.23
USH1C-201ENST00000005226 AGRPO00253 132 aa13.62□□□□□ -0.23
USH1C-201ENST00000005226 BNIP3LO60238 219 aa13.62□□□□□ -0.23
USH1C-201ENST00000005226 FZD6O60353 706 aa13.62□□□□□ -0.23
USH1C-201ENST00000005226 DDX39BQ13838 428 aaKnown RBP13.62□□□□□ -0.23
USH1C-201ENST00000005226 MRPL58Q14197 206 aaKnown RBP13.62□□□□□ -0.23
USH1C-201ENST00000005226 VMACQ2NL98 169 aa13.62□□□□□ -0.23
USH1C-201ENST00000005226 CYP27C1Q4G0S4 372 aa13.62□□□□□ -0.23
USH1C-201ENST00000005226 C6orf183Q5T699 404 aa13.62□□□□□ -0.23
USH1C-201ENST00000005226 MYO19Q96H55 970 aa13.62□□□□□ -0.23
USH1C-201ENST00000005226 COPS4Q9BT78 406 aa13.62□□□□□ -0.23
USH1C-201ENST00000005226 ARHGAP39Q9C0H5 1083 aa13.62□□□□□ -0.23
USH1C-201ENST00000005226 RNF6Q9Y252 685 aa13.62□□□□□ -0.23
USH1C-201ENST00000005226 MAN2B2Q9Y2E5 1009 aa13.62□□□□□ -0.23
USH1C-201ENST00000005226 BTBD3Q9Y2F9 522 aa13.62□□□□□ -0.23
USH1C-201ENST00000005226 TBL1XO60907 577 aa13.61□□□□□ -0.23
USH1C-201ENST00000005226 UPK1BO75841 260 aa13.61□□□□□ -0.23
USH1C-201ENST00000005226 WDR47O94967 919 aa13.61□□□□□ -0.23
USH1C-201ENST00000005226 NTRK1P04629 796 aa13.61□□□□□ -0.23
USH1C-201ENST00000005226 HNF1BP35680 557 aa13.61□□□□□ -0.23
USH1C-201ENST00000005226 HSPA14Q0VDF9 509 aa13.61□□□□□ -0.23
USH1C-201ENST00000005226 GPR17Q13304 367 aa13.61□□□□□ -0.23
USH1C-201ENST00000005226 TP53BP2Q13625 1128 aa13.61□□□□□ -0.23
USH1C-201ENST00000005226 NEK5Q6P3R8 708 aa13.61□□□□□ -0.23
USH1C-201ENST00000005226 ANKS3Q6ZW76 656 aa13.61□□□□□ -0.23
USH1C-201ENST00000005226 SLC24A5Q71RS6 500 aa13.61□□□□□ -0.23
USH1C-201ENST00000005226 PRSS48Q7RTY5 328 aa13.61□□□□□ -0.23
USH1C-201ENST00000005226 TSPYL5Q86VY4 417 aaPredicted RBP13.61□□□□□ -0.23
USH1C-201ENST00000005226 SVOPQ8N4V2 548 aa13.61□□□□□ -0.23
USH1C-201ENST00000005226 TRIB2Q92519 343 aa13.61□□□□□ -0.23
USH1C-201ENST00000005226 TTPALQ9BTX7 342 aa13.61□□□□□ -0.23
USH1C-201ENST00000005226 OR51E2Q9H255 320 aa13.61□□□□□ -0.23
USH1C-201ENST00000005226 EHD1Q9H4M9 534 aa13.61□□□□□ -0.23
USH1C-201ENST00000005226 TAS2R16Q9NYV7 291 aa13.61□□□□□ -0.23
USH1C-201ENST00000005226 SLC6A14Q9UN76 642 aa13.61□□□□□ -0.23
USH1C-201ENST00000005226 TESMINQ9Y4I5 508 aa13.61□□□□□ -0.23
USH1C-201ENST00000005226 PCDHGA6Q9Y5G7 932 aa13.61□□□□□ -0.23
USH1C-201ENST00000005226 A0A1B0GVM2 712 aa13.61□□□□□ -0.23
USH1C-201ENST00000005226 PABPN1LA6NDY0 278 aaKnown RBP13.61□□□□□ -0.23
USH1C-201ENST00000005226 SSX4O60224 188 aa13.61□□□□□ -0.23
USH1C-201ENST00000005226 OPN1SWP03999 348 aa13.61□□□□□ -0.23
USH1C-201ENST00000005226 KIR3DL1P43629 444 aa13.61□□□□□ -0.23
USH1C-201ENST00000005226 DGKEP52429 567 aa13.61□□□□□ -0.23
USH1C-201ENST00000005226 ZNF404Q494X3 552 aa13.61□□□□□ -0.23
USH1C-201ENST00000005226 LRRC73Q5JTD7 316 aa13.61□□□□□ -0.23
USH1C-201ENST00000005226 RGMBQ6NW40 437 aa13.61□□□□□ -0.23
USH1C-201ENST00000005226 CERS6Q6ZMG9 384 aa13.61□□□□□ -0.23
USH1C-201ENST00000005226 SLC38A4Q969I6 547 aa13.61□□□□□ -0.23
USH1C-201ENST00000005226 GABARAPL1Q9H0R8 117 aa13.61□□□□□ -0.23
USH1C-201ENST00000005226 REEP1Q9H902 201 aa13.61□□□□□ -0.23
USH1C-201ENST00000005226 NMRK2Q9NPI5 230 aa13.61□□□□□ -0.23
USH1C-201ENST00000005226 RLIMQ9NVW2 624 aa13.61□□□□□ -0.23
USH1C-201ENST00000005226 GABRQQ9UN88 632 aa13.61□□□□□ -0.23
USH1C-201ENST00000005226 SLC22A14Q9Y267 594 aa13.61□□□□□ -0.23
USH1C-201ENST00000005226 ZNF840PA6NDX5 716 aa13.6□□□□□ -0.23
USH1C-201ENST00000005226 TTC36A6NLP5 189 aa13.6□□□□□ -0.23
USH1C-201ENST00000005226 DSCR3O14972 297 aa13.6□□□□□ -0.23
USH1C-201ENST00000005226 SNPHO15079 494 aa13.6□□□□□ -0.23
USH1C-201ENST00000005226 HSMCR30P0CW71 290 aa13.6□□□□□ -0.23
USH1C-201ENST00000005226 ACPPP15309 386 aa13.6□□□□□ -0.23
USH1C-201ENST00000005226 ALOX12P18054 663 aa13.6□□□□□ -0.23
USH1C-201ENST00000005226 ITGALP20701 1170 aa13.6□□□□□ -0.23
USH1C-201ENST00000005226 TCEA1P23193 301 aaKnown RBP13.6□□□□□ -0.23
USH1C-201ENST00000005226 PAX3P23760 479 aa13.6□□□□□ -0.23
USH1C-201ENST00000005226 ACRV1P26436 265 aa13.6□□□□□ -0.23
USH1C-201ENST00000005226 GRK3P35626 688 aa13.6□□□□□ -0.23
USH1C-201ENST00000005226 CRYBA2P53672 197 aa13.6□□□□□ -0.23
USH1C-201ENST00000005226 CXCR4P61073 352 aa13.6□□□□□ -0.23
USH1C-201ENST00000005226 CAMK2GQ13555 558 aaPredicted RBP13.6□□□□□ -0.23
USH1C-201ENST00000005226 PLEKHG6Q3KR16 790 aa13.6□□□□□ -0.23
USH1C-201ENST00000005226 HEATR4Q86WZ0 1026 aa13.6□□□□□ -0.23
USH1C-201ENST00000005226 VRK3Q8IV63 474 aa13.6□□□□□ -0.23
USH1C-201ENST00000005226 APCDD1Q8J025 514 aa13.6□□□□□ -0.23
USH1C-201ENST00000005226 MINDY2Q8NBR6 621 aa13.6□□□□□ -0.23
USH1C-201ENST00000005226 Q96MT0 163 aa13.6□□□□□ -0.23
USH1C-201ENST00000005226 ITPAQ9BY32 194 aa13.6□□□□□ -0.23
USH1C-201ENST00000005226 RUBCNLQ9H714 662 aa13.6□□□□□ -0.23
USH1C-201ENST00000005226 RAD18Q9NS91 495 aa13.6□□□□□ -0.23
USH1C-201ENST00000005226 GPR83Q9NYM4 423 aa13.6□□□□□ -0.23
USH1C-201ENST00000005226 GLYATL1P3A0A0U1RQE8 302 aa13.6□□□□□ -0.23
USH1C-201ENST00000005226 SYN3O14994 580 aa13.6□□□□□ -0.23
USH1C-201ENST00000005226 ANXA5P08758 320 aa13.6□□□□□ -0.23
USH1C-201ENST00000005226 STSP08842 583 aa13.6□□□□□ -0.23
USH1C-201ENST00000005226 CCR7P32248 378 aa13.6□□□□□ -0.23
USH1C-201ENST00000005226 CSKP41240 450 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms