RNA–Protein interactions for RNA: ENSMUST00000005841.15

Ctcf-201, Transcript of Transcriptional repressor CTCF, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctcf, Length 3,782 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctcf-201ENSMUST00000005841 SdslQ8R238 329 aa16.41■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Nudt4Q8R2U6 179 aa16.41■□□□□ 0.22
Ctcf-201ENSMUST00000005841 MiosQ8VE19 875 aa16.41■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Hspb11Q9D6H2 143 aa16.41■□□□□ 0.22
Ctcf-201ENSMUST00000005841 HaspinQ9Z0R0 754 aa16.41■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Gm19965J3QNY8 723 aa16.41■□□□□ 0.22
Ctcf-201ENSMUST00000005841 1700122O11RikJ3QPW6 241 aa16.41■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Vmn2r10K7N621 847 aa16.41■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Pbx3O35317 434 aa16.41■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Cyp4a10O88833 509 aa16.41■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Gdf6P43028 454 aa16.41■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Kcnj9P48543 393 aa16.41■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Ccdc177Q3UHB8 706 aa16.41■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Znf366Q6NS86 746 aa16.41■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Dnajc27Q8CFP6 273 aa16.41■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Thap1Q8CHW1 210 aa16.41■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Glcci1Q8K3I9 537 aa16.41■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Chchd6Q91VN4 273 aa16.41■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Msh4Q99MT2 958 aa16.41■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Kif12Q9D2Z8 642 aa16.41■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Ern1Q9EQY0 977 aa16.41■□□□□ 0.22
Ctcf-201ENSMUST00000005841 NfkbieO54910 364 aa16.4■□□□□ 0.22
Ctcf-201ENSMUST00000005841 AmbnO55189 407 aa16.4■□□□□ 0.22
Ctcf-201ENSMUST00000005841 PfklP12382 780 aa16.4■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Rab12P35283 243 aa16.4■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Pon2Q62086 354 aa16.4■□□□□ 0.22
Ctcf-201ENSMUST00000005841 F12Q80YC5 597 aa16.4■□□□□ 0.22
Ctcf-201ENSMUST00000005841 TraipQ8VIG6 470 aa16.4■□□□□ 0.22
Ctcf-201ENSMUST00000005841 GhdcQ99J23 532 aa16.4■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Trim16Q99PP9 556 aa16.4■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Slc25a46Q9CQS4 418 aa16.4■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Tyk2Q9R117 1184 aa16.4■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Krt6bQ9Z331 562 aa16.4■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Sec22bO08547 215 aaKnown RBP16.4■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Tmem253Q3UNB8 204 aa16.4■□□□□ 0.22
Ctcf-201ENSMUST00000005841 LsampQ8BLK3 341 aa16.4■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Slc25a37Q920G8 338 aa16.4■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Lims1Q99JW4 325 aa16.4■□□□□ 0.22
Ctcf-201ENSMUST00000005841 NtpcrQ9CQA9 190 aaKnown RBP16.4■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Rhox13F6YCR7 232 aa16.4■□□□□ 0.22
Ctcf-201ENSMUST00000005841 P01810 119 aa16.4■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Wnt3P17553 355 aa16.4■□□□□ 0.22
Ctcf-201ENSMUST00000005841 CcnjQ3TZI6 379 aa16.4■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Slc26a10Q5EBI0 492 aa16.4■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Rbbp7Q60973 425 aaKnown RBP16.4■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Rapgefl1Q68EF8 662 aa16.4■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Usp7Q6A4J8 1103 aa16.4■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Klhl5Q6PFE1 708 aa16.4■□□□□ 0.22
Ctcf-201ENSMUST00000005841 RragdQ7TT45 449 aa16.4■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Acp6Q8BP40 418 aa16.4■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Ift22Q9DAI2 185 aa16.4■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Olfr711Q9EPG2 314 aa16.4■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Trpv4Q9EPK8 871 aa16.4■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Fads3Q9JJE7 449 aa16.4■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Tinf2Q9QXG9 341 aa16.4■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Loxl3Q9Z175 754 aa16.4■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Vmn2r85G3UW56 850 aa16.39■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Gng2P63213 71 aa16.39■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Olfr1364Q5SZS9 314 aa16.39■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Rsbn1Q80T69 795 aa16.39■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Fam20bQ8VCS3 409 aa16.39■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Tnk1Q99ML2 666 aa16.39■□□□□ 0.22
Ctcf-201ENSMUST00000005841 Mbd3l1Q9D9H3 186 aa16.39■□□□□ 0.22
Ctcf-201ENSMUST00000005841 A0A286YDU1 74 aa16.39■□□□□ 0.21
Ctcf-201ENSMUST00000005841 Slc25a54B1AUS6 473 aa16.39■□□□□ 0.21
Ctcf-201ENSMUST00000005841 Armc4B2RY50 1037 aa16.39■□□□□ 0.21
Ctcf-201ENSMUST00000005841 Celf5D3Z4T1 395 aaKnown RBP16.39■□□□□ 0.21
Ctcf-201ENSMUST00000005841 Rdh8D3Z6W3 317 aa16.39■□□□□ 0.21
Ctcf-201ENSMUST00000005841 Vmn2r3H3BJ88 915 aa16.39■□□□□ 0.21
Ctcf-201ENSMUST00000005841 MbP04247 154 aa16.39■□□□□ 0.21
Ctcf-201ENSMUST00000005841 Gpx5P21765 221 aa16.39■□□□□ 0.21
Ctcf-201ENSMUST00000005841 HccsP53702 272 aa16.39■□□□□ 0.21
Ctcf-201ENSMUST00000005841 Mfsd2bQ3T9M1 494 aa16.39■□□□□ 0.21
Ctcf-201ENSMUST00000005841 Commd7Q8BG94 200 aa16.39■□□□□ 0.21
Ctcf-201ENSMUST00000005841 Arhgap12Q8C0D4 838 aa16.39■□□□□ 0.21
Ctcf-201ENSMUST00000005841 Psapl1Q8C1C1 522 aa16.39■□□□□ 0.21
Ctcf-201ENSMUST00000005841 EloaQ8CB77 773 aaKnown RBP16.39■□□□□ 0.21
Ctcf-201ENSMUST00000005841 PolbQ8K409 335 aa16.39■□□□□ 0.21
Ctcf-201ENSMUST00000005841 Pex16Q91XC9 336 aa16.39■□□□□ 0.21
Ctcf-201ENSMUST00000005841 Adgrl4Q923X1 739 aa16.39■□□□□ 0.21
Ctcf-201ENSMUST00000005841 Timm22Q9CQ85 194 aa16.39■□□□□ 0.21
Ctcf-201ENSMUST00000005841 Prpsap1Q9D0M1 356 aa16.39■□□□□ 0.21
Ctcf-201ENSMUST00000005841 Tmed11Q9D2R4 215 aa16.39■□□□□ 0.21
Ctcf-201ENSMUST00000005841 Ddit4Q9D3F7 229 aa16.39■□□□□ 0.21
Ctcf-201ENSMUST00000005841 Vnn3Q9QZ25 500 aa16.39■□□□□ 0.21
Ctcf-201ENSMUST00000005841 ReckQ9Z0J1 971 aa16.39■□□□□ 0.21
Ctcf-201ENSMUST00000005841 PtprsB0V2N1 1907 aa16.39■□□□□ 0.21
Ctcf-201ENSMUST00000005841 Zfp626A0A0U1RQ84 676 aa16.39■□□□□ 0.21
Ctcf-201ENSMUST00000005841 Vti1bO88384 232 aa16.39■□□□□ 0.21
Ctcf-201ENSMUST00000005841 Cops4O88544 406 aa16.39■□□□□ 0.21
Ctcf-201ENSMUST00000005841 Mapkapk3Q3UMW7 384 aa16.39■□□□□ 0.21
Ctcf-201ENSMUST00000005841 OclnQ61146 521 aa16.39■□□□□ 0.21
Ctcf-201ENSMUST00000005841 Lix1Q6P566 282 aa16.39■□□□□ 0.21
Ctcf-201ENSMUST00000005841 Slfn5Q8CBA2 884 aa16.39■□□□□ 0.21
Ctcf-201ENSMUST00000005841 Syt12Q920N7 421 aa16.39■□□□□ 0.21
Ctcf-201ENSMUST00000005841 Chrm3Q9ERZ3 589 aa16.39■□□□□ 0.21
Ctcf-201ENSMUST00000005841 Obsl1D3YYU8 1804 aaKnown RBP16.39■□□□□ 0.21
Ctcf-201ENSMUST00000005841 Mup18A2BIM8 181 aa16.38■□□□□ 0.21
Ctcf-201ENSMUST00000005841 Mup11P04938 181 aa16.38■□□□□ 0.21
Ctcf-201ENSMUST00000005841 Cdkl4Q3TZA2 342 aa16.38■□□□□ 0.21
Retrieved 100 of 22,080 RNA–protein pairs in 10 ms