RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 TACR1P25103 407 aa13.38□□□□□ -0.27
SCARB2-227ENST00000640957 ACVRL1P37023 503 aa13.38□□□□□ -0.27
SCARB2-227ENST00000640957 PSEN2P49810 448 aa13.38□□□□□ -0.27
SCARB2-227ENST00000640957 SEMG2Q02383 582 aa13.38□□□□□ -0.27
SCARB2-227ENST00000640957 BTBD16Q32M84 506 aa13.38□□□□□ -0.27
SCARB2-227ENST00000640957 ZNF792Q3KQV3 632 aa13.38□□□□□ -0.27
SCARB2-227ENST00000640957 OR2T5Q6IEZ7 315 aa13.38□□□□□ -0.27
SCARB2-227ENST00000640957 MRNIPQ6NTE8 343 aa13.38□□□□□ -0.27
SCARB2-227ENST00000640957 METTL23Q86XA0 190 aa13.38□□□□□ -0.27
SCARB2-227ENST00000640957 CHPFQ8IZ52 775 aa13.38□□□□□ -0.27
SCARB2-227ENST00000640957 OR2T29Q8NH02 315 aa13.38□□□□□ -0.27
SCARB2-227ENST00000640957 MYLPFQ96A32 169 aa13.38□□□□□ -0.27
SCARB2-227ENST00000640957 SLC30A2Q9BRI3 323 aa13.38□□□□□ -0.27
SCARB2-227ENST00000640957 EBPLQ9BY08 206 aa13.38□□□□□ -0.27
SCARB2-227ENST00000640957 NFKBIZQ9BYH8 718 aa13.38□□□□□ -0.27
SCARB2-227ENST00000640957 MUC13Q9H3R2 512 aa13.38□□□□□ -0.27
SCARB2-227ENST00000640957 CDCP1Q9H5V8 836 aa13.38□□□□□ -0.27
SCARB2-227ENST00000640957 RABL2AQ9UBK7 228 aaPredicted RBP13.38□□□□□ -0.27
SCARB2-227ENST00000640957 FAM8A1Q9UBU6 413 aa13.38□□□□□ -0.27
SCARB2-227ENST00000640957 KCNH4Q9UQ05 1017 aa13.38□□□□□ -0.27
SCARB2-227ENST00000640957 EFCAB10A6NFE3 127 aa13.38□□□□□ -0.27
SCARB2-227ENST00000640957 PSMD3O43242 534 aa13.38□□□□□ -0.27
SCARB2-227ENST00000640957 NUDT7P0C024 238 aa13.38□□□□□ -0.27
SCARB2-227ENST00000640957 UBL4AP11441 157 aa13.38□□□□□ -0.27
SCARB2-227ENST00000640957 NPRL3Q12980 569 aa13.38□□□□□ -0.27
SCARB2-227ENST00000640957 ZBTB6Q15916 424 aa13.38□□□□□ -0.27
SCARB2-227ENST00000640957 PSAPL1Q6NUJ1 521 aa13.38□□□□□ -0.27
SCARB2-227ENST00000640957 BCDIN3DQ7Z5W3 292 aaKnown RBP13.38□□□□□ -0.27
SCARB2-227ENST00000640957 GGHQ92820 318 aa13.38□□□□□ -0.27
SCARB2-227ENST00000640957 GTPBP3Q969Y2 492 aaKnown RBP13.38□□□□□ -0.27
SCARB2-227ENST00000640957 KIAA1191Q96A73 305 aa13.38□□□□□ -0.27
SCARB2-227ENST00000640957 NTAN1Q96AB6 310 aa13.38□□□□□ -0.27
SCARB2-227ENST00000640957 IL4I1Q96RQ9 567 aa13.38□□□□□ -0.27
SCARB2-227ENST00000640957 BRINP2Q9C0B6 783 aa13.38□□□□□ -0.27
SCARB2-227ENST00000640957 CLPBQ9H078 707 aa13.38□□□□□ -0.27
SCARB2-227ENST00000640957 DOCK3Q8IZD9 2030 aa13.38□□□□□ -0.27
SCARB2-227ENST00000640957 MYO10Q9HD67 2058 aa13.38□□□□□ -0.27
SCARB2-227ENST00000640957 TYW5A2RUC4 315 aaKnown RBP13.38□□□□□ -0.27
SCARB2-227ENST00000640957 E9PAM4 449 aa13.38□□□□□ -0.27
SCARB2-227ENST00000640957 H3BUI4 141 aa13.38□□□□□ -0.27
SCARB2-227ENST00000640957 SLC16A6O15403 523 aa13.38□□□□□ -0.27
SCARB2-227ENST00000640957 GPR32O75388 356 aa13.38□□□□□ -0.27
SCARB2-227ENST00000640957 FEN1P39748 380 aaKnown RBP13.38□□□□□ -0.27
SCARB2-227ENST00000640957 THPOP40225 353 aa13.38□□□□□ -0.27
SCARB2-227ENST00000640957 KRT6CP48668 564 aa13.38□□□□□ -0.27
SCARB2-227ENST00000640957 XKR7Q5GH72 579 aa13.38□□□□□ -0.27
SCARB2-227ENST00000640957 DPY19L3Q6ZPD9 716 aa13.38□□□□□ -0.27
SCARB2-227ENST00000640957 PRSS48Q7RTY5 328 aa13.38□□□□□ -0.27
SCARB2-227ENST00000640957 HOMEZQ8IX15 550 aa13.38□□□□□ -0.27
SCARB2-227ENST00000640957 YIPF7Q8N8F6 280 aa13.38□□□□□ -0.27
SCARB2-227ENST00000640957 SMAD5Q99717 465 aaKnown RBP13.38□□□□□ -0.27
SCARB2-227ENST00000640957 AARSD1Q9BTE6 412 aaKnown RBP13.38□□□□□ -0.27
SCARB2-227ENST00000640957 MFSD1Q9H3U5 465 aa13.38□□□□□ -0.27
SCARB2-227ENST00000640957 THUMPD1Q9NXG2 353 aaKnown RBP13.38□□□□□ -0.27
SCARB2-227ENST00000640957 E2F3O00716 465 aa13.37□□□□□ -0.27
SCARB2-227ENST00000640957 ARHGAP33O14559 1287 aa13.37□□□□□ -0.27
SCARB2-227ENST00000640957 AREL1O15033 823 aa13.37□□□□□ -0.27
SCARB2-227ENST00000640957 ATF4P18848 351 aaPredicted RBP13.37□□□□□ -0.27
SCARB2-227ENST00000640957 CAMK2GQ13555 558 aaPredicted RBP13.37□□□□□ -0.27
SCARB2-227ENST00000640957 STARD3Q14849 445 aa13.37□□□□□ -0.27
SCARB2-227ENST00000640957 ZNF621Q6ZSS3 439 aa13.37□□□□□ -0.27
SCARB2-227ENST00000640957 CCDC28AQ8IWP9 274 aa13.37□□□□□ -0.27
SCARB2-227ENST00000640957 C3orf58Q8NDZ4 430 aa13.37□□□□□ -0.27
SCARB2-227ENST00000640957 DEDD2Q8WXF8 326 aa13.37□□□□□ -0.27
SCARB2-227ENST00000640957 BHMTQ93088 406 aa13.37□□□□□ -0.27
SCARB2-227ENST00000640957 SPON2Q9BUD6 331 aa13.37□□□□□ -0.27
SCARB2-227ENST00000640957 STMN3Q9NZ72 180 aa13.37□□□□□ -0.27
SCARB2-227ENST00000640957 ZIM2Q9NZV7 527 aa13.37□□□□□ -0.27
SCARB2-227ENST00000640957 RHCGQ9UBD6 479 aa13.37□□□□□ -0.27
SCARB2-227ENST00000640957 SLC7A4O43246 635 aa13.37□□□□□ -0.27
SCARB2-227ENST00000640957 MMP2P08253 660 aa13.37□□□□□ -0.27
SCARB2-227ENST00000640957 IL18R1Q13478 541 aa13.37□□□□□ -0.27
SCARB2-227ENST00000640957 TYSND1Q2T9J0 566 aa13.37□□□□□ -0.27
SCARB2-227ENST00000640957 KIAA1614Q5VZ46 1190 aa13.37□□□□□ -0.27
SCARB2-227ENST00000640957 FAM131AQ6UXB0 335 aa13.37□□□□□ -0.27
SCARB2-227ENST00000640957 CLDN19Q8N6F1 224 aa13.37□□□□□ -0.27
SCARB2-227ENST00000640957 SPPL2AQ8TCT8 520 aa13.37□□□□□ -0.27
SCARB2-227ENST00000640957 SNX18Q96RF0 628 aa13.37□□□□□ -0.27
SCARB2-227ENST00000640957 C1orf109Q9NX04 203 aa13.37□□□□□ -0.27
SCARB2-227ENST00000640957 DLGAP4Q9Y2H0 992 aa13.37□□□□□ -0.27
SCARB2-227ENST00000640957 LYVE1Q9Y5Y7 322 aa13.37□□□□□ -0.27
SCARB2-227ENST00000640957 COL1A2P08123 1366 aa13.37□□□□□ -0.27
SCARB2-227ENST00000640957 ZNF646O15015 1829 aaPredicted RBP13.37□□□□□ -0.27
SCARB2-227ENST00000640957 TSPAN4O14817 238 aa13.37□□□□□ -0.27
SCARB2-227ENST00000640957 RPS17P08708 135 aaKnown RBP13.37□□□□□ -0.27
SCARB2-227ENST00000640957 CLEC2LP0C7M8 214 aa13.37□□□□□ -0.27
SCARB2-227ENST00000640957 PRR35P0CG20 571 aa13.37□□□□□ -0.27
SCARB2-227ENST00000640957 ACPPP15309 386 aa13.37□□□□□ -0.27
SCARB2-227ENST00000640957 POLR2EP19388 210 aaKnown RBP13.37□□□□□ -0.27
SCARB2-227ENST00000640957 RPS19P39019 145 aaKnown RBP13.37□□□□□ -0.27
SCARB2-227ENST00000640957 ZNF157P51786 506 aaPredicted RBP13.37□□□□□ -0.27
SCARB2-227ENST00000640957 UGT2B15P54855 530 aa13.37□□□□□ -0.27
SCARB2-227ENST00000640957 ZNF267Q14586 743 aaPredicted RBP13.37□□□□□ -0.27
SCARB2-227ENST00000640957 TIGD5Q53EQ6 642 aa13.37□□□□□ -0.27
SCARB2-227ENST00000640957 PM20D1Q6GTS8 502 aa13.37□□□□□ -0.27
SCARB2-227ENST00000640957 OR4F3Q6IEY1 312 aa13.37□□□□□ -0.27
SCARB2-227ENST00000640957 GOLGA7Q7Z5G4 137 aa13.37□□□□□ -0.27
SCARB2-227ENST00000640957 SPERTQ8NA61 448 aa13.37□□□□□ -0.27
SCARB2-227ENST00000640957 CDKN2AIPNLQ96HQ2 116 aa13.37□□□□□ -0.27
SCARB2-227ENST00000640957 MED30Q96HR3 178 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms