RNA–Protein interactions for RNA: ENST00000639856.1

TRIM3-215, Transcript of tripartite motif containing 3, humanhuman

TSL 5 BASIC

Gene TRIM3, Length 2,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-215ENST00000639856 CCDC115Q96NT0 180 aa14.65□□□□□ -0.06
TRIM3-215ENST00000639856 OR52E6Q96RD3 313 aa14.65□□□□□ -0.06
TRIM3-215ENST00000639856 CHID1Q9BWS9 393 aa14.65□□□□□ -0.06
TRIM3-215ENST00000639856 TTYH1Q9H313 450 aaPredicted RBP14.65□□□□□ -0.06
TRIM3-215ENST00000639856 OLAHQ9NV23 265 aa14.65□□□□□ -0.06
TRIM3-215ENST00000639856 DLGAP4Q9Y2H0 992 aa14.65□□□□□ -0.06
TRIM3-215ENST00000639856 FADS3Q9Y5Q0 445 aa14.65□□□□□ -0.06
TRIM3-215ENST00000639856 NUMA1Q14980 2115 aa14.64□□□□□ -0.07
TRIM3-215ENST00000639856 NPIPB8E9PQR5 432 aa14.64□□□□□ -0.07
TRIM3-215ENST00000639856 PLOD2O00469 737 aa14.64□□□□□ -0.07
TRIM3-215ENST00000639856 ANXA6P08133 673 aa14.64□□□□□ -0.07
TRIM3-215ENST00000639856 PBLDP30039 288 aaPredicted RBP14.64□□□□□ -0.07
TRIM3-215ENST00000639856 KIR2DL1P43626 348 aaPredicted RBP14.64□□□□□ -0.07
TRIM3-215ENST00000639856 PREPP48147 710 aa14.64□□□□□ -0.07
TRIM3-215ENST00000639856 NEK2P51955 445 aa14.64□□□□□ -0.07
TRIM3-215ENST00000639856 TAS2R38P59533 333 aa14.64□□□□□ -0.07
TRIM3-215ENST00000639856 CYP4F3Q08477 520 aa14.64□□□□□ -0.07
TRIM3-215ENST00000639856 SLC44A4Q53GD3 710 aa14.64□□□□□ -0.07
TRIM3-215ENST00000639856 SLC30A9Q6PML9 568 aa14.64□□□□□ -0.07
TRIM3-215ENST00000639856 FAM9CQ8IZT9 166 aa14.64□□□□□ -0.07
TRIM3-215ENST00000639856 METTL25Q8N6Q8 603 aa14.64□□□□□ -0.07
TRIM3-215ENST00000639856 OR2T12Q8NG77 320 aa14.64□□□□□ -0.07
TRIM3-215ENST00000639856 CLHC1Q8NHS4 586 aa14.64□□□□□ -0.07
TRIM3-215ENST00000639856 CXorf40AQ8TE69 158 aa14.64□□□□□ -0.07
TRIM3-215ENST00000639856 FOXJ1Q92949 421 aa14.64□□□□□ -0.07
TRIM3-215ENST00000639856 SH3GL1Q99961 368 aa14.64□□□□□ -0.07
TRIM3-215ENST00000639856 THUMPD3Q9BV44 507 aaKnown RBP14.64□□□□□ -0.07
TRIM3-215ENST00000639856 GORASP2Q9H8Y8 452 aa14.64□□□□□ -0.07
TRIM3-215ENST00000639856 SLC25A37Q9NYZ2 338 aa14.64□□□□□ -0.07
TRIM3-215ENST00000639856 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.64□□□□□ -0.07
TRIM3-215ENST00000639856 V9GYQ6 96 aa14.64□□□□□ -0.07
TRIM3-215ENST00000639856 SERTM1A2A2V5 107 aa14.63□□□□□ -0.07
TRIM3-215ENST00000639856 ANHXE9PGG2 379 aa14.63□□□□□ -0.07
TRIM3-215ENST00000639856 H3BNH8 94 aa14.63□□□□□ -0.07
TRIM3-215ENST00000639856 H3BQ06 376 aaPredicted RBP14.63□□□□□ -0.07
TRIM3-215ENST00000639856 PRAMEF4O60810 478 aa14.63□□□□□ -0.07
TRIM3-215ENST00000639856 GMNNO75496 209 aa14.63□□□□□ -0.07
TRIM3-215ENST00000639856 OR6B1O95007 311 aa14.63□□□□□ -0.07
TRIM3-215ENST00000639856 GSTM1P09488 218 aa14.63□□□□□ -0.07
TRIM3-215ENST00000639856 PCSK2P16519 638 aa14.63□□□□□ -0.07
TRIM3-215ENST00000639856 GPR1P46091 355 aa14.63□□□□□ -0.07
TRIM3-215ENST00000639856 PRLHRP49683 370 aa14.63□□□□□ -0.07
TRIM3-215ENST00000639856 PFN3P60673 137 aa14.63□□□□□ -0.07
TRIM3-215ENST00000639856 GSTM4Q03013 218 aa14.63□□□□□ -0.07
TRIM3-215ENST00000639856 MERTKQ12866 999 aa14.63□□□□□ -0.07
TRIM3-215ENST00000639856 CAMK2GQ13555 558 aaPredicted RBP14.63□□□□□ -0.07
TRIM3-215ENST00000639856 CST6Q15828 149 aa14.63□□□□□ -0.07
TRIM3-215ENST00000639856 ADRM1Q16186 407 aa14.63□□□□□ -0.07
TRIM3-215ENST00000639856 NADK2Q4G0N4 442 aa14.63□□□□□ -0.07
TRIM3-215ENST00000639856 AGBL4Q5VU57 503 aa14.63□□□□□ -0.07
TRIM3-215ENST00000639856 PRAMEF9Q5VWM5 478 aa14.63□□□□□ -0.07
TRIM3-215ENST00000639856 KIAA1211LQ6NV74 962 aa14.63□□□□□ -0.07
TRIM3-215ENST00000639856 TMEM220Q6QAJ8 160 aa14.63□□□□□ -0.07
TRIM3-215ENST00000639856 NUDT18Q6ZVK8 323 aa14.63□□□□□ -0.07
TRIM3-215ENST00000639856 MSRB3Q8IXL7 192 aa14.63□□□□□ -0.07
TRIM3-215ENST00000639856 RIMKLAQ8IXN7 391 aa14.63□□□□□ -0.07
TRIM3-215ENST00000639856 PLA2G15Q8NCC3 412 aa14.63□□□□□ -0.07
TRIM3-215ENST00000639856 ZNF548Q8NEK5 533 aaPredicted RBP14.63□□□□□ -0.07
TRIM3-215ENST00000639856 TNIP2Q8NFZ5 429 aa14.63□□□□□ -0.07
TRIM3-215ENST00000639856 DNAJB8Q8NHS0 232 aa14.63□□□□□ -0.07
TRIM3-215ENST00000639856 CSGALNACT1Q8TDX6 532 aa14.63□□□□□ -0.07
TRIM3-215ENST00000639856 FBXL8Q96CD0 374 aa14.63□□□□□ -0.07
TRIM3-215ENST00000639856 DGCR14Q96DF8 476 aaKnown RBP14.63□□□□□ -0.07
TRIM3-215ENST00000639856 CMTM7Q96FZ5 175 aa14.63□□□□□ -0.07
TRIM3-215ENST00000639856 MAGEB10Q96LZ2 347 aaPredicted RBP14.63□□□□□ -0.07
TRIM3-215ENST00000639856 BDH2Q9BUT1 245 aa14.63□□□□□ -0.07
TRIM3-215ENST00000639856 ADI1Q9BV57 179 aa14.63□□□□□ -0.07
TRIM3-215ENST00000639856 GRIP2Q9C0E4 1043 aa14.63□□□□□ -0.07
TRIM3-215ENST00000639856 ATG10Q9H0Y0 220 aa14.63□□□□□ -0.07
TRIM3-215ENST00000639856 RSPH9Q9H1X1 276 aaPredicted RBP14.63□□□□□ -0.07
TRIM3-215ENST00000639856 OR2AG1Q9H205 316 aa14.63□□□□□ -0.07
TRIM3-215ENST00000639856 MYRFQ9Y2G1 1151 aa14.63□□□□□ -0.07
TRIM3-215ENST00000639856 TMED5Q9Y3A6 229 aa14.63□□□□□ -0.07
TRIM3-215ENST00000639856 TRBV5-3A0A0A0MS03 114 aa14.63□□□□□ -0.07
TRIM3-215ENST00000639856 EI24O14681 340 aa14.63□□□□□ -0.07
TRIM3-215ENST00000639856 MT-ND1P03886 318 aa14.63□□□□□ -0.07
TRIM3-215ENST00000639856 ITPKAP23677 461 aa14.63□□□□□ -0.07
TRIM3-215ENST00000639856 NR1H2P55055 460 aa14.63□□□□□ -0.07
TRIM3-215ENST00000639856 RUNDC3AQ59EK9 446 aa14.63□□□□□ -0.07
TRIM3-215ENST00000639856 THEMIS2Q5TEJ8 643 aa14.63□□□□□ -0.07
TRIM3-215ENST00000639856 FAM46CQ5VWP2 391 aa14.63□□□□□ -0.07
TRIM3-215ENST00000639856 FRG2Q64ET8 278 aa14.63□□□□□ -0.07
TRIM3-215ENST00000639856 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.63□□□□□ -0.07
TRIM3-215ENST00000639856 FAM47BQ8NA70 645 aa14.63□□□□□ -0.07
TRIM3-215ENST00000639856 TSPAN14Q8NG11 270 aa14.63□□□□□ -0.07
TRIM3-215ENST00000639856 OR10A6Q8NH74 314 aa14.63□□□□□ -0.07
TRIM3-215ENST00000639856 FRG2BQ96QU4 278 aa14.63□□□□□ -0.07
TRIM3-215ENST00000639856 IKZF5Q9H5V7 419 aa14.63□□□□□ -0.07
TRIM3-215ENST00000639856 LMCD1Q9NZU5 365 aa14.63□□□□□ -0.07
TRIM3-215ENST00000639856 ZNF639Q9UID6 485 aa14.63□□□□□ -0.07
TRIM3-215ENST00000639856 AP3M1Q9Y2T2 418 aa14.63□□□□□ -0.07
TRIM3-215ENST00000639856 A0A1B0GTW7 788 aa14.62□□□□□ -0.07
TRIM3-215ENST00000639856 A0A1W2PP55 124 aa14.62□□□□□ -0.07
TRIM3-215ENST00000639856 ATG13O75143 517 aa14.62□□□□□ -0.07
TRIM3-215ENST00000639856 ERN1O75460 977 aaKnown RBP14.62□□□□□ -0.07
TRIM3-215ENST00000639856 PSIP1O75475 530 aaKnown RBP14.62□□□□□ -0.07
TRIM3-215ENST00000639856 JUPP14923 745 aa14.62□□□□□ -0.07
TRIM3-215ENST00000639856 IGFBP4P22692 258 aa14.62□□□□□ -0.07
TRIM3-215ENST00000639856 MYF6P23409 242 aa14.62□□□□□ -0.07
TRIM3-215ENST00000639856 MAPK1P28482 360 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms