RNA–Protein interactions for RNA: ENST00000638725.1

SNIP1-204, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 2

Gene SNIP1, Length 2,761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-204ENST00000638725 DUSP4Q13115 394 aa10.61□□□□□ -0.71
SNIP1-204ENST00000638725 PROX2Q3B8N5 592 aa10.61□□□□□ -0.71
SNIP1-204ENST00000638725 UBE2UQ5VVX9 321 aa10.61□□□□□ -0.71
SNIP1-204ENST00000638725 CERS6Q6ZMG9 384 aa10.61□□□□□ -0.71
SNIP1-204ENST00000638725 LACC1Q8IV20 430 aa10.61□□□□□ -0.71
SNIP1-204ENST00000638725 ENTHD1Q8IYW4 607 aa10.61□□□□□ -0.71
SNIP1-204ENST00000638725 BEND7Q8N7W2 519 aaPredicted RBP10.61□□□□□ -0.71
SNIP1-204ENST00000638725 KIAA1958Q8N8K9 716 aa10.61□□□□□ -0.71
SNIP1-204ENST00000638725 UBTD2Q8WUN7 234 aa10.61□□□□□ -0.71
SNIP1-204ENST00000638725 HSH2DQ96JZ2 352 aa10.61□□□□□ -0.71
SNIP1-204ENST00000638725 DPH2Q9BQC3 489 aaPredicted RBP10.61□□□□□ -0.71
SNIP1-204ENST00000638725 GPR62Q9BZJ7 368 aa10.61□□□□□ -0.71
SNIP1-204ENST00000638725 SP140LQ9H930 580 aa10.61□□□□□ -0.71
SNIP1-204ENST00000638725 CPNE5Q9HCH3 593 aa10.61□□□□□ -0.71
SNIP1-204ENST00000638725 FCF1Q9Y324 198 aaKnown RBP10.61□□□□□ -0.71
SNIP1-204ENST00000638725 TMEM189-UBE2V1I3L0A0 370 aa10.61□□□□□ -0.71
SNIP1-204ENST00000638725 M0R082 166 aa10.61□□□□□ -0.71
SNIP1-204ENST00000638725 VIPP01282 170 aa10.61□□□□□ -0.71
SNIP1-204ENST00000638725 SEMG1P04279 462 aa10.61□□□□□ -0.71
SNIP1-204ENST00000638725 DBTP11182 482 aaKnown RBP10.61□□□□□ -0.71
SNIP1-204ENST00000638725 HOXB6P17509 224 aaKnown RBP10.61□□□□□ -0.71
SNIP1-204ENST00000638725 RPS3P23396 243 aaKnown RBP eCLIP10.61□□□□□ -0.71
SNIP1-204ENST00000638725 GADD45AP24522 165 aa10.61□□□□□ -0.71
SNIP1-204ENST00000638725 GTF2E2P29084 291 aaKnown RBP10.61□□□□□ -0.71
SNIP1-204ENST00000638725 C21orf33P30042 268 aaPredicted RBP10.61□□□□□ -0.71
SNIP1-204ENST00000638725 ATP5C1P36542 298 aaKnown RBP10.61□□□□□ -0.71
SNIP1-204ENST00000638725 PPP3CCP48454 512 aa10.61□□□□□ -0.71
SNIP1-204ENST00000638725 FAM189BP81408 668 aa10.61□□□□□ -0.71
SNIP1-204ENST00000638725 NPRL3Q12980 569 aa10.61□□□□□ -0.71
SNIP1-204ENST00000638725 SF3B4Q15427 424 aaKnown RBP eCLIP10.61□□□□□ -0.71
SNIP1-204ENST00000638725 VMACQ2NL98 169 aa10.61□□□□□ -0.71
SNIP1-204ENST00000638725 ZZZ3Q8IYH5 903 aa10.61□□□□□ -0.71
SNIP1-204ENST00000638725 RBFAQ8N0V3 343 aa10.61□□□□□ -0.71
SNIP1-204ENST00000638725 Q8N9G6 341 aaPredicted RBP10.61□□□□□ -0.71
SNIP1-204ENST00000638725 OR6K2Q8NGY2 324 aa10.61□□□□□ -0.71
SNIP1-204ENST00000638725 IPCEF1Q8WWN9 437 aaPredicted RBP10.61□□□□□ -0.71
SNIP1-204ENST00000638725 PROX1Q92786 737 aa10.61□□□□□ -0.71
SNIP1-204ENST00000638725 EFHD2Q96C19 240 aaPredicted RBP10.61□□□□□ -0.71
SNIP1-204ENST00000638725 APIPQ96GX9 242 aa10.61□□□□□ -0.71
SNIP1-204ENST00000638725 CTRCQ99895 268 aa10.61□□□□□ -0.71
SNIP1-204ENST00000638725 EPS8L2Q9H6S3 715 aa10.61□□□□□ -0.71
SNIP1-204ENST00000638725 AMBNQ9NP70 447 aa10.61□□□□□ -0.71
SNIP1-204ENST00000638725 GKN1Q9NS71 199 aa10.61□□□□□ -0.71
SNIP1-204ENST00000638725 THUMPD1Q9NXG2 353 aaKnown RBP10.61□□□□□ -0.71
SNIP1-204ENST00000638725 LHX3Q9UBR4 397 aa10.61□□□□□ -0.71
SNIP1-204ENST00000638725 DNMT3LQ9UJW3 386 aa10.61□□□□□ -0.71
SNIP1-204ENST00000638725 PABPN1LA6NDY0 278 aaKnown RBP10.6□□□□□ -0.71
SNIP1-204ENST00000638725 AGAP5A6NIR3 686 aa10.6□□□□□ -0.71
SNIP1-204ENST00000638725 EVPLLA8MZ36 301 aa10.6□□□□□ -0.71
SNIP1-204ENST00000638725 UPK3BL1B0FP48 263 aa10.6□□□□□ -0.71
SNIP1-204ENST00000638725 UPK3BL2E5RIL1 263 aa10.6□□□□□ -0.71
SNIP1-204ENST00000638725 CLIC1O00299 241 aa10.6□□□□□ -0.71
SNIP1-204ENST00000638725 SCAMP3O14828 347 aaKnown RBP10.6□□□□□ -0.71
SNIP1-204ENST00000638725 SNPHO15079 494 aa10.6□□□□□ -0.71
SNIP1-204ENST00000638725 INPPL1O15357 1258 aa10.6□□□□□ -0.71
SNIP1-204ENST00000638725 FZD6O60353 706 aa10.6□□□□□ -0.71
SNIP1-204ENST00000638725 IRF1P10914 325 aa10.6□□□□□ -0.71
SNIP1-204ENST00000638725 ENGP17813 658 aa10.6□□□□□ -0.71
SNIP1-204ENST00000638725 KDELR2P33947 212 aa10.6□□□□□ -0.71
SNIP1-204ENST00000638725 HNRNPFP52597 415 aaKnown RBP10.6□□□□□ -0.71
SNIP1-204ENST00000638725 CAMK2GQ13555 558 aaPredicted RBP10.6□□□□□ -0.71
SNIP1-204ENST00000638725 TTLL9Q3SXZ7 439 aa10.6□□□□□ -0.71
SNIP1-204ENST00000638725 GPRC6AQ5T6X5 926 aa10.6□□□□□ -0.71
SNIP1-204ENST00000638725 PDE12Q6L8Q7 609 aaKnown RBP10.6□□□□□ -0.71
SNIP1-204ENST00000638725 CXorf57Q6NSI4 855 aaKnown RBP10.6□□□□□ -0.71
SNIP1-204ENST00000638725 AKAP14Q86UN6 197 aa10.6□□□□□ -0.71
SNIP1-204ENST00000638725 ADGRG2Q8IZP9 1017 aa10.6□□□□□ -0.71
SNIP1-204ENST00000638725 APOLD1Q96LR9 279 aa10.6□□□□□ -0.71
SNIP1-204ENST00000638725 PITX2Q99697 317 aa10.6□□□□□ -0.71
SNIP1-204ENST00000638725 COPS4Q9BT78 406 aa10.6□□□□□ -0.71
SNIP1-204ENST00000638725 SLC29A3Q9BZD2 475 aa10.6□□□□□ -0.71
SNIP1-204ENST00000638725 MMP27Q9H306 513 aa10.6□□□□□ -0.71
SNIP1-204ENST00000638725 AFF4Q9UHB7 1163 aaKnown RBP10.6□□□□□ -0.71
SNIP1-204ENST00000638725 ZNF451Q9Y4E5 1061 aa10.6□□□□□ -0.71
SNIP1-204ENST00000638725 A0A1B0GVM2 712 aa10.6□□□□□ -0.71
SNIP1-204ENST00000638725 ISPDA4D126 451 aa10.6□□□□□ -0.71
SNIP1-204ENST00000638725 KCNK5O95279 499 aa10.6□□□□□ -0.71
SNIP1-204ENST00000638725 PRPS2P11908 318 aa10.6□□□□□ -0.71
SNIP1-204ENST00000638725 ATF6P18850 670 aa10.6□□□□□ -0.71
SNIP1-204ENST00000638725 MZF1P28698 734 aaPredicted RBP10.6□□□□□ -0.71
SNIP1-204ENST00000638725 CORO1AP31146 461 aaKnown RBP10.6□□□□□ -0.71
SNIP1-204ENST00000638725 GRK5P34947 590 aa10.6□□□□□ -0.71
SNIP1-204ENST00000638725 RHOAP61586 193 aa10.6□□□□□ -0.71
SNIP1-204ENST00000638725 NFATC2Q13469 925 aa10.6□□□□□ -0.71
SNIP1-204ENST00000638725 SOWAHCQ53LP3 525 aaPredicted RBP10.6□□□□□ -0.71
SNIP1-204ENST00000638725 GPR153Q6NV75 609 aa10.6□□□□□ -0.71
SNIP1-204ENST00000638725 SERPINA11Q86U17 422 aa10.6□□□□□ -0.71
SNIP1-204ENST00000638725 PTOV1Q86YD1 416 aa10.6□□□□□ -0.71
SNIP1-204ENST00000638725 P3H2Q8IVL5 708 aa10.6□□□□□ -0.71
SNIP1-204ENST00000638725 RNF175Q8N4F7 328 aa10.6□□□□□ -0.71
SNIP1-204ENST00000638725 NELL1Q92832 810 aa10.6□□□□□ -0.71
SNIP1-204ENST00000638725 POP5Q969H6 163 aaKnown RBP10.6□□□□□ -0.71
SNIP1-204ENST00000638725 FAM193BQ96PV7 902 aaPredicted RBP10.6□□□□□ -0.71
SNIP1-204ENST00000638725 EBPLQ9BY08 206 aa10.6□□□□□ -0.71
SNIP1-204ENST00000638725 TM6SF2Q9BZW4 377 aa10.6□□□□□ -0.71
SNIP1-204ENST00000638725 REXO4Q9GZR2 422 aaKnown RBP10.6□□□□□ -0.71
SNIP1-204ENST00000638725 EHD1Q9H4M9 534 aa10.6□□□□□ -0.71
SNIP1-204ENST00000638725 RNF167Q9H6Y7 350 aa10.6□□□□□ -0.71
SNIP1-204ENST00000638725 REEP1Q9H902 201 aa10.6□□□□□ -0.71
SNIP1-204ENST00000638725 RNF6Q9Y252 685 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms