RNA–Protein interactions for RNA: ENST00000638567.1

SCARB2-210, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 4,415 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-210ENST00000638567 FOXA1P55317 472 aa16.22■□□□□ 0.19
SCARB2-210ENST00000638567 GALNT1Q10472 559 aaPredicted RBP16.22■□□□□ 0.19
SCARB2-210ENST00000638567 GK3PQ14409 553 aa16.22■□□□□ 0.19
SCARB2-210ENST00000638567 ABRAXAS2Q15018 415 aa16.22■□□□□ 0.19
SCARB2-210ENST00000638567 PKDCCQ504Y2 493 aa16.22■□□□□ 0.19
SCARB2-210ENST00000638567 LRRC66Q68CR7 880 aa16.22■□□□□ 0.19
SCARB2-210ENST00000638567 FAM110BQ8TC76 370 aa16.22■□□□□ 0.19
SCARB2-210ENST00000638567 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.22■□□□□ 0.19
SCARB2-210ENST00000638567 KLHL33A6NCF5 533 aa16.21■□□□□ 0.19
SCARB2-210ENST00000638567 PPP6CO00743 305 aa16.21■□□□□ 0.19
SCARB2-210ENST00000638567 C7P10643 843 aa16.21■□□□□ 0.19
SCARB2-210ENST00000638567 GRIK2Q13002 908 aa16.21■□□□□ 0.19
SCARB2-210ENST00000638567 NOGQ13253 232 aa16.21■□□□□ 0.19
SCARB2-210ENST00000638567 CRTC2Q53ET0 693 aaPredicted RBP16.21■□□□□ 0.19
SCARB2-210ENST00000638567 TPRG1LQ5T0D9 272 aa16.21■□□□□ 0.19
SCARB2-210ENST00000638567 KIAA1614Q5VZ46 1190 aa16.21■□□□□ 0.19
SCARB2-210ENST00000638567 CMTM8Q8IZV2 173 aa16.21■□□□□ 0.19
SCARB2-210ENST00000638567 ZMIZ2Q8NF64 920 aa16.21■□□□□ 0.19
SCARB2-210ENST00000638567 PIK3R3Q92569 461 aa16.21■□□□□ 0.19
SCARB2-210ENST00000638567 SLC9A6Q92581 669 aa16.21■□□□□ 0.19
SCARB2-210ENST00000638567 L3HYPDHQ96EM0 354 aa16.21■□□□□ 0.19
SCARB2-210ENST00000638567 RIOK2Q9BVS4 552 aaKnown RBP16.21■□□□□ 0.19
SCARB2-210ENST00000638567 OR2AG1Q9H205 316 aa16.21■□□□□ 0.19
SCARB2-210ENST00000638567 PRSS51A0A1B0GVH4 220 aa16.21■□□□□ 0.19
SCARB2-210ENST00000638567 NDUFA5Q16718 116 aa16.21■□□□□ 0.19
SCARB2-210ENST00000638567 CARD16Q5EG05 197 aa16.21■□□□□ 0.19
SCARB2-210ENST00000638567 ZNF544Q6NX49 715 aa16.21■□□□□ 0.19
SCARB2-210ENST00000638567 MAMDC4Q6UXC1 1216 aa16.21■□□□□ 0.19
SCARB2-210ENST00000638567 Q6ZVU0 165 aa16.21■□□□□ 0.19
SCARB2-210ENST00000638567 FCRL4Q96PJ5 515 aa16.21■□□□□ 0.19
SCARB2-210ENST00000638567 SDR39U1Q9NRG7 319 aaPredicted RBP16.21■□□□□ 0.19
SCARB2-210ENST00000638567 NKIRAS2Q9NYR9 191 aa16.21■□□□□ 0.19
SCARB2-210ENST00000638567 MALT1Q9UDY8 824 aa16.21■□□□□ 0.19
SCARB2-210ENST00000638567 ASB3Q9Y575 518 aa16.21■□□□□ 0.19
SCARB2-210ENST00000638567 PMF1-BGLAPU3KQ54 211 aa16.21■□□□□ 0.19
SCARB2-210ENST00000638567 ZW10O43264 779 aa16.21■□□□□ 0.19
SCARB2-210ENST00000638567 PI15O43692 258 aa16.21■□□□□ 0.19
SCARB2-210ENST00000638567 PENKP01210 267 aaPredicted RBP16.21■□□□□ 0.19
SCARB2-210ENST00000638567 C8AP07357 584 aa16.21■□□□□ 0.19
SCARB2-210ENST00000638567 CLCN4P51793 760 aa16.21■□□□□ 0.19
SCARB2-210ENST00000638567 SEMA3AQ14563 771 aa16.21■□□□□ 0.19
SCARB2-210ENST00000638567 RNASE12Q5GAN4 147 aaKnown RBP16.21■□□□□ 0.19
SCARB2-210ENST00000638567 FAM46CQ5VWP2 391 aa16.21■□□□□ 0.19
SCARB2-210ENST00000638567 CXorf57Q6NSI4 855 aaKnown RBP16.21■□□□□ 0.19
SCARB2-210ENST00000638567 TPRG1Q6ZUI0 275 aa16.21■□□□□ 0.19
SCARB2-210ENST00000638567 NXPE1Q8N323 547 aa16.21■□□□□ 0.19
SCARB2-210ENST00000638567 COL21A1Q96P44 957 aa16.21■□□□□ 0.19
SCARB2-210ENST00000638567 ANKRD60Q9BZ19 345 aa16.21■□□□□ 0.19
SCARB2-210ENST00000638567 TBC1D17Q9HA65 648 aa16.21■□□□□ 0.19
SCARB2-210ENST00000638567 ITGB4P16144 1822 aa16.21■□□□□ 0.18
SCARB2-210ENST00000638567 IRGMA1A4Y4 181 aa16.2■□□□□ 0.18
SCARB2-210ENST00000638567 SH3PXD2BA1X283 911 aa16.2■□□□□ 0.18
SCARB2-210ENST00000638567 BOLA2-SMG1P6H3BVE0 249 aa16.2■□□□□ 0.18
SCARB2-210ENST00000638567 CNMDO75829 334 aa16.2■□□□□ 0.18
SCARB2-210ENST00000638567 BCKDHAP12694 445 aa16.2■□□□□ 0.18
SCARB2-210ENST00000638567 SDC2P34741 201 aa16.2■□□□□ 0.18
SCARB2-210ENST00000638567 ZNF404Q494X3 552 aa16.2■□□□□ 0.18
SCARB2-210ENST00000638567 TMCO6Q96DC7 493 aa16.2■□□□□ 0.18
SCARB2-210ENST00000638567 TM9SF3Q9HD45 589 aa16.2■□□□□ 0.18
SCARB2-210ENST00000638567 TMED5Q9Y3A6 229 aa16.2■□□□□ 0.18
SCARB2-210ENST00000638567 COL18A1P39060 1754 aa16.2■□□□□ 0.18
SCARB2-210ENST00000638567 ACOX3O15254 700 aa16.2■□□□□ 0.18
SCARB2-210ENST00000638567 OR10H2O60403 315 aa16.2■□□□□ 0.18
SCARB2-210ENST00000638567 ZNF623O75123 536 aa16.2■□□□□ 0.18
SCARB2-210ENST00000638567 PRNPP04156 253 aa16.2■□□□□ 0.18
SCARB2-210ENST00000638567 WASP42768 502 aa16.2■□□□□ 0.18
SCARB2-210ENST00000638567 PMS2P3Q13401 168 aa16.2■□□□□ 0.18
SCARB2-210ENST00000638567 NDUFAF6Q330K2 333 aa16.2■□□□□ 0.18
SCARB2-210ENST00000638567 UBXN11Q5T124 520 aa16.2■□□□□ 0.18
SCARB2-210ENST00000638567 GOLM1Q8NBJ4 401 aa16.2■□□□□ 0.18
SCARB2-210ENST00000638567 FUBP1Q96AE4 644 aaKnown RBP16.2■□□□□ 0.18
SCARB2-210ENST00000638567 C11orf24Q96F05 449 aaPredicted RBP16.2■□□□□ 0.18
SCARB2-210ENST00000638567 CITED4Q96RK1 184 aa16.2■□□□□ 0.18
SCARB2-210ENST00000638567 RIMS3Q9UJD0 308 aa16.2■□□□□ 0.18
SCARB2-210ENST00000638567 OAS3Q9Y6K5 1087 aaKnown RBP16.2■□□□□ 0.18
SCARB2-210ENST00000638567 ADH1CP00326 375 aa16.2■□□□□ 0.18
SCARB2-210ENST00000638567 MYF6P23409 242 aa16.2■□□□□ 0.18
SCARB2-210ENST00000638567 CDK6Q00534 326 aa16.2■□□□□ 0.18
SCARB2-210ENST00000638567 RGS1Q08116 209 aa16.2■□□□□ 0.18
SCARB2-210ENST00000638567 NFATC2Q13469 925 aa16.2■□□□□ 0.18
SCARB2-210ENST00000638567 ZFAND4Q86XD8 727 aa16.2■□□□□ 0.18
SCARB2-210ENST00000638567 RASSF5Q8WWW0 418 aa16.2■□□□□ 0.18
SCARB2-210ENST00000638567 GFM1Q96RP9 751 aaKnown RBP16.2■□□□□ 0.18
SCARB2-210ENST00000638567 ING4Q9UNL4 249 aa16.2■□□□□ 0.18
SCARB2-210ENST00000638567 TRBC2A0A5B9 178 aa16.2■□□□□ 0.18
SCARB2-210ENST00000638567 FABP12A6NFH5 140 aa16.2■□□□□ 0.18
SCARB2-210ENST00000638567 OR5F1O95221 314 aa16.2■□□□□ 0.18
SCARB2-210ENST00000638567 ATP1B2P14415 290 aaPredicted RBP16.2■□□□□ 0.18
SCARB2-210ENST00000638567 RING1Q06587 406 aa16.2■□□□□ 0.18
SCARB2-210ENST00000638567 ZNHIT3Q15649 155 aaPredicted RBP16.2■□□□□ 0.18
SCARB2-210ENST00000638567 C5orf22Q49AR2 442 aa16.2■□□□□ 0.18
SCARB2-210ENST00000638567 PAGE3Q5JUK9 113 aa16.2■□□□□ 0.18
SCARB2-210ENST00000638567 MBOAT1Q6ZNC8 495 aa16.2■□□□□ 0.18
SCARB2-210ENST00000638567 RBM23Q86U06 439 aaKnown RBP16.2■□□□□ 0.18
SCARB2-210ENST00000638567 THOC6Q86W42 341 aaKnown RBP16.2■□□□□ 0.18
SCARB2-210ENST00000638567 DCAF4L2Q8NA75 395 aa16.2■□□□□ 0.18
SCARB2-210ENST00000638567 OR10G6Q8NH81 332 aa16.2■□□□□ 0.18
SCARB2-210ENST00000638567 CLIP3Q96DZ5 547 aa16.2■□□□□ 0.18
SCARB2-210ENST00000638567 EFCAB11Q9BUY7 163 aa16.2■□□□□ 0.18
SCARB2-210ENST00000638567 SP140LQ9H930 580 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms