RNA–Protein interactions for RNA: ENST00000637325.1

PNKP-228, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 100 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-228ENST00000637325 SCN2AQ99250 2005 aa13.23□□□□□ -0.29
PNKP-228ENST00000637325 EIF3FO00303 357 aaPredicted RBP13.23□□□□□ -0.29
PNKP-228ENST00000637325 SRPX2O60687 465 aaPredicted RBP13.23□□□□□ -0.29
PNKP-228ENST00000637325 CTSVO60911 334 aa13.23□□□□□ -0.29
PNKP-228ENST00000637325 DNAJB5O75953 348 aa13.23□□□□□ -0.29
PNKP-228ENST00000637325 SEC31AO94979 1220 aaKnown RBP13.23□□□□□ -0.29
PNKP-228ENST00000637325 AHSGP02765 367 aa13.23□□□□□ -0.29
PNKP-228ENST00000637325 EIF2S1P05198 315 aaKnown RBP13.23□□□□□ -0.29
PNKP-228ENST00000637325 ERGP11308 486 aa13.23□□□□□ -0.29
PNKP-228ENST00000637325 FOLR3P41439 243 aa13.23□□□□□ -0.29
PNKP-228ENST00000637325 FAM214AQ32MH5 1076 aa13.23□□□□□ -0.29
PNKP-228ENST00000637325 WASHC2DQ5SRD0 308 aa13.23□□□□□ -0.29
PNKP-228ENST00000637325 THEMIS2Q5TEJ8 643 aa13.23□□□□□ -0.29
PNKP-228ENST00000637325 CPZQ66K79 652 aa13.23□□□□□ -0.29
PNKP-228ENST00000637325 CYHR1Q6ZMK1 362 aa13.23□□□□□ -0.29
PNKP-228ENST00000637325 PIWIL4Q7Z3Z4 852 aaKnown RBP13.23□□□□□ -0.29
PNKP-228ENST00000637325 ANKMY2Q8IV38 441 aa13.23□□□□□ -0.29
PNKP-228ENST00000637325 CNTN4Q8IWV2 1026 aa13.23□□□□□ -0.29
PNKP-228ENST00000637325 GPATCH11Q8N954 259 aa13.23□□□□□ -0.29
PNKP-228ENST00000637325 FBXO15Q8NCQ5 510 aaPredicted RBP13.23□□□□□ -0.29
PNKP-228ENST00000637325 BBOF1Q8ND07 529 aa13.23□□□□□ -0.29
PNKP-228ENST00000637325 PPFIBP2Q8ND30 876 aa13.23□□□□□ -0.29
PNKP-228ENST00000637325 ADAMTS17Q8TE56 1095 aa13.23□□□□□ -0.29
PNKP-228ENST00000637325 ING2Q9H160 280 aa13.23□□□□□ -0.29
PNKP-228ENST00000637325 CUTCQ9NTM9 273 aa13.23□□□□□ -0.29
PNKP-228ENST00000637325 SNX24Q9Y343 169 aa13.23□□□□□ -0.29
PNKP-228ENST00000637325 KLK4Q9Y5K2 254 aa13.23□□□□□ -0.29
PNKP-228ENST00000637325 A0A1B0GX78 115 aa13.22□□□□□ -0.29
PNKP-228ENST00000637325 PABPN1LA6NDY0 278 aaKnown RBP13.22□□□□□ -0.29
PNKP-228ENST00000637325 PYCARD-AS1I3L0S3 204 aa13.22□□□□□ -0.29
PNKP-228ENST00000637325 GFYI3L273 518 aa13.22□□□□□ -0.29
PNKP-228ENST00000637325 DSCR3O14972 297 aa13.22□□□□□ -0.29
PNKP-228ENST00000637325 SLC16A8O95907 504 aa13.22□□□□□ -0.29
PNKP-228ENST00000637325 GABRB3P28472 473 aa13.22□□□□□ -0.29
PNKP-228ENST00000637325 RPL21P46778 160 aaKnown RBP13.22□□□□□ -0.29
PNKP-228ENST00000637325 RRADP55042 308 aa13.22□□□□□ -0.29
PNKP-228ENST00000637325 PDIA2Q13087 525 aaKnown RBP13.22□□□□□ -0.29
PNKP-228ENST00000637325 CALCOCO2Q13137 446 aa13.22□□□□□ -0.29
PNKP-228ENST00000637325 PDAP1Q13442 181 aaKnown RBP13.22□□□□□ -0.29
PNKP-228ENST00000637325 SSPNQ14714 243 aa13.22□□□□□ -0.29
PNKP-228ENST00000637325 RBM20Q5T481 1227 aaKnown RBP13.22□□□□□ -0.29
PNKP-228ENST00000637325 TEDDM1Q5T9Z0 273 aa13.22□□□□□ -0.29
PNKP-228ENST00000637325 ICE2Q659A1 982 aa13.22□□□□□ -0.29
PNKP-228ENST00000637325 TCTN3Q6NUS6 607 aa13.22□□□□□ -0.29
PNKP-228ENST00000637325 ASB18Q6ZVZ8 466 aa13.22□□□□□ -0.29
PNKP-228ENST00000637325 MAATS1Q7Z4T9 603 aa13.22□□□□□ -0.29
PNKP-228ENST00000637325 SPNS2Q8IVW8 549 aa13.22□□□□□ -0.29
PNKP-228ENST00000637325 MYO1HQ8N1T3 1032 aa13.22□□□□□ -0.29
PNKP-228ENST00000637325 C17orf53Q8N3J3 647 aaPredicted RBP13.22□□□□□ -0.29
PNKP-228ENST00000637325 MCOLN3Q8TDD5 553 aa13.22□□□□□ -0.29
PNKP-228ENST00000637325 ZNF480Q8WV37 535 aa13.22□□□□□ -0.29
PNKP-228ENST00000637325 EEF1AKMT1Q8WVE0 214 aa13.22□□□□□ -0.29
PNKP-228ENST00000637325 IP6K3Q96PC2 410 aa13.22□□□□□ -0.29
PNKP-228ENST00000637325 SLC25A23Q9BV35 468 aa13.22□□□□□ -0.29
PNKP-228ENST00000637325 TRIM55Q9BYV6 548 aa13.22□□□□□ -0.29
PNKP-228ENST00000637325 TRIM4Q9C037 500 aa13.22□□□□□ -0.29
PNKP-228ENST00000637325 ANKMY1Q9P2S6 941 aa13.22□□□□□ -0.29
PNKP-228ENST00000637325 TAC3Q9UHF0 121 aa13.22□□□□□ -0.29
PNKP-228ENST00000637325 ANAPC2Q9UJX6 822 aa13.22□□□□□ -0.29
PNKP-228ENST00000637325 G3BP2Q9UN86 482 aaKnown RBP13.22□□□□□ -0.29
PNKP-228ENST00000637325 TEX264Q9Y6I9 313 aa13.22□□□□□ -0.29
PNKP-228ENST00000637325 HYKKA2RU49 373 aa13.21□□□□□ -0.29
PNKP-228ENST00000637325 FAM187AA6NFU0 413 aa13.21□□□□□ -0.29
PNKP-228ENST00000637325 E7ENX8 843 aa13.21□□□□□ -0.29
PNKP-228ENST00000637325 PEX12O00623 359 aa13.21□□□□□ -0.29
PNKP-228ENST00000637325 KLF7O75840 302 aaPredicted RBP13.21□□□□□ -0.29
PNKP-228ENST00000637325 C8GP07360 202 aa13.21□□□□□ -0.29
PNKP-228ENST00000637325 HIST1H2AGP0C0S8 130 aaPredicted RBP13.21□□□□□ -0.29
PNKP-228ENST00000637325 NR1D1P20393 614 aa13.21□□□□□ -0.29
PNKP-228ENST00000637325 HIST1H2ADP20671 130 aa13.21□□□□□ -0.29
PNKP-228ENST00000637325 CDKN2DP55273 166 aa13.21□□□□□ -0.29
PNKP-228ENST00000637325 YBX1P67809 324 aaKnown RBP13.21□□□□□ -0.29
PNKP-228ENST00000637325 ABATP80404 500 aa13.21□□□□□ -0.29
PNKP-228ENST00000637325 MRPS25P82663 173 aaKnown RBP13.21□□□□□ -0.29
PNKP-228ENST00000637325 TAP2Q03519 686 aa13.21□□□□□ -0.29
PNKP-228ENST00000637325 PRDX1Q06830 199 aaKnown RBP13.21□□□□□ -0.29
PNKP-228ENST00000637325 KLRB1Q12918 225 aa13.21□□□□□ -0.29
PNKP-228ENST00000637325 ATP1A4Q13733 1029 aa13.21□□□□□ -0.29
PNKP-228ENST00000637325 STEAP4Q687X5 459 aa13.21□□□□□ -0.29
PNKP-228ENST00000637325 FRMPD2BQ6IN97 320 aa13.21□□□□□ -0.29
PNKP-228ENST00000637325 TRMT10BQ6PF06 316 aaKnown RBP13.21□□□□□ -0.29
PNKP-228ENST00000637325 PAQR3Q6TCH7 311 aa13.21□□□□□ -0.29
PNKP-228ENST00000637325 MED25Q71SY5 747 aa13.21□□□□□ -0.29
PNKP-228ENST00000637325 RNF44Q7L0R7 432 aa13.21□□□□□ -0.29
PNKP-228ENST00000637325 ADCK2Q7Z695 626 aa13.21□□□□□ -0.29
PNKP-228ENST00000637325 GALNT7Q86SF2 657 aa13.21□□□□□ -0.29
PNKP-228ENST00000637325 TMEM102Q8N9M5 508 aaPredicted RBP13.21□□□□□ -0.29
PNKP-228ENST00000637325 TEX19Q8NA77 164 aa13.21□□□□□ -0.29
PNKP-228ENST00000637325 FBXO36Q8NEA4 188 aa13.21□□□□□ -0.29
PNKP-228ENST00000637325 PTERQ96BW5 349 aa13.21□□□□□ -0.29
PNKP-228ENST00000637325 LINGO1Q96FE5 620 aa13.21□□□□□ -0.29
PNKP-228ENST00000637325 HIST1H2AHQ96KK5 128 aa13.21□□□□□ -0.29
PNKP-228ENST00000637325 ZNF285Q96NJ3 590 aa13.21□□□□□ -0.29
PNKP-228ENST00000637325 HIST1H2AJQ99878 128 aa13.21□□□□□ -0.29
PNKP-228ENST00000637325 ZFYVE21Q9BQ24 234 aa13.21□□□□□ -0.29
PNKP-228ENST00000637325 PLCD4Q9BRC7 762 aa13.21□□□□□ -0.29
PNKP-228ENST00000637325 H2AFJQ9BTM1 129 aa13.21□□□□□ -0.29
PNKP-228ENST00000637325 SLC6A20Q9NP91 592 aa13.21□□□□□ -0.29
PNKP-228ENST00000637325 ZFATQ9P243 1243 aa13.21□□□□□ -0.29
PNKP-228ENST00000637325 SLC17A6Q9P2U8 582 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms