RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 GRSF1Q12849 480 aaKnown RBP eCLIP2.43□□□□□ -2.02
SMARCB1-208ENST00000634926 GRIK2Q13002 908 aa2.43□□□□□ -2.02
SMARCB1-208ENST00000634926 IL11RAQ14626 422 aa2.43□□□□□ -2.02
SMARCB1-208ENST00000634926 NFATC4Q14934 902 aa2.43□□□□□ -2.02
SMARCB1-208ENST00000634926 DLG2Q15700 870 aa2.43□□□□□ -2.02
SMARCB1-208ENST00000634926 IMMTQ16891 758 aaKnown RBP2.43□□□□□ -2.02
SMARCB1-208ENST00000634926 ZNF805Q5CZA5 627 aa2.43□□□□□ -2.02
SMARCB1-208ENST00000634926 CLLU1OSQ5K130 101 aa2.43□□□□□ -2.02
SMARCB1-208ENST00000634926 CST9LP1Q5W188 147 aa2.43□□□□□ -2.02
SMARCB1-208ENST00000634926 GGNBP1Q5YKI7 109 aa2.43□□□□□ -2.02
SMARCB1-208ENST00000634926 TMEM198Q66K66 360 aa2.43□□□□□ -2.02
SMARCB1-208ENST00000634926 DHRS7BQ6IAN0 325 aaPredicted RBP2.43□□□□□ -2.02
SMARCB1-208ENST00000634926 PARM1Q6UWI2 310 aa2.43□□□□□ -2.02
SMARCB1-208ENST00000634926 CWC27Q6UX04 472 aaKnown RBP2.43□□□□□ -2.02
SMARCB1-208ENST00000634926 RBPMS2Q6ZRY4 209 aaKnown RBP2.43□□□□□ -2.02
SMARCB1-208ENST00000634926 FAM47EQ6ZV65 393 aa2.43□□□□□ -2.02
SMARCB1-208ENST00000634926 NIPA1Q7RTP0 329 aa2.43□□□□□ -2.02
SMARCB1-208ENST00000634926 ASCL5Q7RTU5 278 aa2.43□□□□□ -2.02
SMARCB1-208ENST00000634926 FAM228AQ86W67 206 aa2.43□□□□□ -2.02
SMARCB1-208ENST00000634926 TMEM173Q86WV6 379 aaPredicted RBP2.43□□□□□ -2.02
SMARCB1-208ENST00000634926 CCDC60Q8IWA6 550 aaPredicted RBP2.43□□□□□ -2.02
SMARCB1-208ENST00000634926 THNSL1Q8IYQ7 743 aa2.43□□□□□ -2.02
SMARCB1-208ENST00000634926 SPATA6LQ8N4H0 392 aa2.43□□□□□ -2.02
SMARCB1-208ENST00000634926 TMEM105Q8N8V8 129 aa2.43□□□□□ -2.02
SMARCB1-208ENST00000634926 GPATCH11Q8N954 259 aa2.43□□□□□ -2.02
SMARCB1-208ENST00000634926 XXYLT1Q8NBI6 393 aa2.43□□□□□ -2.02
SMARCB1-208ENST00000634926 COLGALT1Q8NBJ5 622 aa2.43□□□□□ -2.02
SMARCB1-208ENST00000634926 ENGASEQ8NFI3 743 aa2.43□□□□□ -2.02
SMARCB1-208ENST00000634926 TSPAN14Q8NG11 270 aa2.43□□□□□ -2.02
SMARCB1-208ENST00000634926 LMO3Q8TAP4 145 aa2.43□□□□□ -2.02
SMARCB1-208ENST00000634926 GPT2Q8TD30 523 aa2.43□□□□□ -2.02
SMARCB1-208ENST00000634926 TMEM174Q8WUU8 243 aa2.43□□□□□ -2.02
SMARCB1-208ENST00000634926 DNAJB3Q8WWF6 145 aa2.43□□□□□ -2.02
SMARCB1-208ENST00000634926 LPGAT1Q92604 370 aa2.43□□□□□ -2.02
SMARCB1-208ENST00000634926 ERGIC1Q969X5 290 aa2.43□□□□□ -2.02
SMARCB1-208ENST00000634926 ATP6V1E2Q96A05 226 aa2.43□□□□□ -2.02
SMARCB1-208ENST00000634926 MIB2Q96AX9 1013 aa2.43□□□□□ -2.02
SMARCB1-208ENST00000634926 PTERQ96BW5 349 aa2.43□□□□□ -2.02
SMARCB1-208ENST00000634926 VMP1Q96GC9 406 aa2.43□□□□□ -2.02
SMARCB1-208ENST00000634926 RAB3IPQ96QF0 476 aaPredicted RBP2.43□□□□□ -2.02
SMARCB1-208ENST00000634926 GFM1Q96RP9 751 aaKnown RBP2.43□□□□□ -2.02
SMARCB1-208ENST00000634926 CDCA3Q99618 268 aaPredicted RBP2.43□□□□□ -2.02
SMARCB1-208ENST00000634926 UBAC1Q9BSL1 405 aa2.43□□□□□ -2.02
SMARCB1-208ENST00000634926 FTHL17Q9BXU8 183 aa2.43□□□□□ -2.02
SMARCB1-208ENST00000634926 RTN4RQ9BZR6 473 aa2.43□□□□□ -2.02
SMARCB1-208ENST00000634926 KRT23Q9C075 422 aa2.43□□□□□ -2.02
SMARCB1-208ENST00000634926 LSG1Q9H089 658 aaKnown RBP2.43□□□□□ -2.02
SMARCB1-208ENST00000634926 KCNN2Q9H2S1 579 aa2.43□□□□□ -2.02
SMARCB1-208ENST00000634926 EPB41L5Q9HCM4 733 aa2.43□□□□□ -2.02
SMARCB1-208ENST00000634926 RGS18Q9NS28 235 aa2.43□□□□□ -2.02
SMARCB1-208ENST00000634926 ERAP1Q9NZ08 941 aa2.43□□□□□ -2.02
SMARCB1-208ENST00000634926 DNAJB4Q9UDY4 337 aa2.43□□□□□ -2.02
SMARCB1-208ENST00000634926 OR14J1Q9UGF5 321 aa2.43□□□□□ -2.02
SMARCB1-208ENST00000634926 ACSL5Q9ULC5 683 aa2.43□□□□□ -2.02
SMARCB1-208ENST00000634926 ISY1Q9ULR0 285 aaKnown RBP2.43□□□□□ -2.02
SMARCB1-208ENST00000634926 PADI3Q9ULW8 664 aa2.43□□□□□ -2.02
SMARCB1-208ENST00000634926 PCDHA12Q9UN75 941 aa2.43□□□□□ -2.02
SMARCB1-208ENST00000634926 COL12A1Q99715 3063 aa2.43□□□□□ -2.02
SMARCB1-208ENST00000634926 PDCD11Q14690 1871 aaKnown RBP2.43□□□□□ -2.02
SMARCB1-208ENST00000634926 TDRD15B5MCY1 1934 aaKnown RBP2.42□□□□□ -2.02
SMARCB1-208ENST00000634926 DOCK6Q96HP0 2047 aa2.42□□□□□ -2.02
SMARCB1-208ENST00000634926 FAM208BQ5VWN6 2430 aa2.42□□□□□ -2.02
SMARCB1-208ENST00000634926 RELNP78509 3460 aa2.42□□□□□ -2.02
SMARCB1-208ENST00000634926 IGKV6-21A0A0C4DH24 114 aa2.42□□□□□ -2.02
SMARCB1-208ENST00000634926 ESYT2A0FGR8 921 aa2.42□□□□□ -2.02
SMARCB1-208ENST00000634926 HIDE1A8MVS5 230 aa2.42□□□□□ -2.02
SMARCB1-208ENST00000634926 MAGEB17A8MXT2 336 aa2.42□□□□□ -2.02
SMARCB1-208ENST00000634926 C2CD4DB7Z1M9 353 aa2.42□□□□□ -2.02
SMARCB1-208ENST00000634926 FAM86B1E9PN63 330 aa2.42□□□□□ -2.02
SMARCB1-208ENST00000634926 H0Y626 953 aa2.42□□□□□ -2.02
SMARCB1-208ENST00000634926 CLGNO14967 610 aa2.42□□□□□ -2.02
SMARCB1-208ENST00000634926 PLRG1O43660 514 aaKnown RBP2.42□□□□□ -2.02
SMARCB1-208ENST00000634926 N4BP1O75113 896 aaKnown RBP2.42□□□□□ -2.02
SMARCB1-208ENST00000634926 RSL1D1O76021 490 aaKnown RBP2.42□□□□□ -2.02
SMARCB1-208ENST00000634926 ZNF432O94892 652 aa2.42□□□□□ -2.02
SMARCB1-208ENST00000634926 EPN2O95208 641 aa2.42□□□□□ -2.02
SMARCB1-208ENST00000634926 STBD1O95210 358 aa2.42□□□□□ -2.02
SMARCB1-208ENST00000634926 CYC1P08574 325 aa2.42□□□□□ -2.02
SMARCB1-208ENST00000634926 FAM86B2P0C5J1 330 aa2.42□□□□□ -2.02
SMARCB1-208ENST00000634926 PRLRP16471 622 aa2.42□□□□□ -2.02
SMARCB1-208ENST00000634926 MUTP22033 750 aa2.42□□□□□ -2.02
SMARCB1-208ENST00000634926 MARK3P27448 753 aa2.42□□□□□ -2.02
SMARCB1-208ENST00000634926 SLC26A2P50443 739 aa2.42□□□□□ -2.02
SMARCB1-208ENST00000634926 CSE1LP55060 971 aaKnown RBP2.42□□□□□ -2.02
SMARCB1-208ENST00000634926 SELENOVP59797 346 aa2.42□□□□□ -2.02
SMARCB1-208ENST00000634926 SIRPAP78324 504 aa2.42□□□□□ -2.02
SMARCB1-208ENST00000634926 RBP5P82980 135 aa2.42□□□□□ -2.02
SMARCB1-208ENST00000634926 PPARDQ03181 441 aa2.42□□□□□ -2.02
SMARCB1-208ENST00000634926 SPOCK1Q08629 439 aa2.42□□□□□ -2.02
SMARCB1-208ENST00000634926 BFSP1Q12934 665 aa2.42□□□□□ -2.02
SMARCB1-208ENST00000634926 TRAF1Q13077 416 aa2.42□□□□□ -2.02
SMARCB1-208ENST00000634926 KEAP1Q14145 624 aa2.42□□□□□ -2.02
SMARCB1-208ENST00000634926 BTG3Q14201 252 aaPredicted RBP2.42□□□□□ -2.02
SMARCB1-208ENST00000634926 UGCGQ16739 394 aa2.42□□□□□ -2.02
SMARCB1-208ENST00000634926 UBE2SQ16763 222 aa2.42□□□□□ -2.02
SMARCB1-208ENST00000634926 MMEL1Q495T6 779 aa2.42□□□□□ -2.02
SMARCB1-208ENST00000634926 CBWD6Q4V339 395 aa2.42□□□□□ -2.02
SMARCB1-208ENST00000634926 CEP55Q53EZ4 464 aa2.42□□□□□ -2.02
SMARCB1-208ENST00000634926 CBWD3Q5JTY5 395 aa2.42□□□□□ -2.02
SMARCB1-208ENST00000634926 LCE3AQ5TA76 89 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms