RNA–Protein interactions for RNA: ENST00000623461.3

VCL-206, Transcript of vinculin, humanhuman

TSL 1 (best)

Gene VCL, Length 7,995 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-206ENST00000623461 SLC13A2Q13183 592 aa8.71□□□□□ -1.02
VCL-206ENST00000623461 Q6ZNX1 250 aa8.71□□□□□ -1.02
VCL-206ENST00000623461 RANBP3LQ86VV4 465 aaPredicted RBP8.71□□□□□ -1.02
VCL-206ENST00000623461 CIR1Q86X95 450 aaPredicted RBP8.71□□□□□ -1.02
VCL-206ENST00000623461 FAM109AQ8N4B1 249 aa8.71□□□□□ -1.02
VCL-206ENST00000623461 NR4A3Q92570 626 aa8.71□□□□□ -1.02
VCL-206ENST00000623461 NTAN1Q96AB6 310 aa8.71□□□□□ -1.02
VCL-206ENST00000623461 AIF1LQ9BQI0 150 aa8.71□□□□□ -1.02
VCL-206ENST00000623461 DPCDQ9BVM2 203 aaPredicted RBP8.71□□□□□ -1.02
VCL-206ENST00000623461 IGLV3-22A0A075B6J6 115 aa8.7□□□□□ -1.02
VCL-206ENST00000623461 GLYATL1P3A0A0U1RQE8 302 aa8.7□□□□□ -1.02
VCL-206ENST00000623461 ANKRD33BA6NCL7 494 aa8.7□□□□□ -1.02
VCL-206ENST00000623461 M0R036 132 aa8.7□□□□□ -1.02
VCL-206ENST00000623461 VNN1O95497 513 aa8.7□□□□□ -1.02
VCL-206ENST00000623461 DHRS4L1P0CG22 281 aa8.7□□□□□ -1.02
VCL-206ENST00000623461 ACADMP11310 421 aa8.7□□□□□ -1.02
VCL-206ENST00000623461 HK1P19367 917 aa8.7□□□□□ -1.02
VCL-206ENST00000623461 CHRNA5P30532 468 aa8.7□□□□□ -1.02
VCL-206ENST00000623461 NUDT6P53370 316 aa8.7□□□□□ -1.02
VCL-206ENST00000623461 RABL3Q5HYI8 236 aa8.7□□□□□ -1.02
VCL-206ENST00000623461 CRB2Q5IJ48 1285 aa8.7□□□□□ -1.02
VCL-206ENST00000623461 NANOGP8Q6NSW7 305 aa8.7□□□□□ -1.02
VCL-206ENST00000623461 SHQ1Q6PI26 577 aaKnown RBP8.7□□□□□ -1.02
VCL-206ENST00000623461 KIAA0319LQ8IZA0 1049 aa8.7□□□□□ -1.02
VCL-206ENST00000623461 CNIH3Q8TBE1 160 aa8.7□□□□□ -1.02
VCL-206ENST00000623461 NIFKQ9BYG3 293 aaKnown RBP8.7□□□□□ -1.02
VCL-206ENST00000623461 BTBD1Q9H0C5 482 aa8.7□□□□□ -1.02
VCL-206ENST00000623461 NANOGQ9H9S0 305 aa8.7□□□□□ -1.02
VCL-206ENST00000623461 POPDC3Q9HBV1 291 aa8.7□□□□□ -1.02
VCL-206ENST00000623461 IKZF2Q9UKS7 526 aa8.7□□□□□ -1.02
VCL-206ENST00000623461 FZD4Q9ULV1 537 aa8.7□□□□□ -1.02
VCL-206ENST00000623461 SNX10Q9Y5X0 201 aa8.7□□□□□ -1.02
VCL-206ENST00000623461 LRRC14BA6NHZ5 514 aa8.7□□□□□ -1.02
VCL-206ENST00000623461 RFPL3O75679 317 aa8.7□□□□□ -1.02
VCL-206ENST00000623461 NUDT14O95848 222 aa8.7□□□□□ -1.02
VCL-206ENST00000623461 MT-ND2P03891 347 aa8.7□□□□□ -1.02
VCL-206ENST00000623461 LGALS2P05162 132 aa8.7□□□□□ -1.02
VCL-206ENST00000623461 ITPKAP23677 461 aa8.7□□□□□ -1.02
VCL-206ENST00000623461 PLA2G16P53816 162 aa8.7□□□□□ -1.02
VCL-206ENST00000623461 PFKPQ01813 784 aa8.7□□□□□ -1.02
VCL-206ENST00000623461 GRM2Q14416 872 aa8.7□□□□□ -1.02
VCL-206ENST00000623461 PON2Q15165 354 aa8.7□□□□□ -1.02
VCL-206ENST00000623461 TBC1D25Q3MII6 688 aa8.7□□□□□ -1.02
VCL-206ENST00000623461 ZNF678Q5SXM1 525 aa8.7□□□□□ -1.02
VCL-206ENST00000623461 EEF1DP3Q658K8 133 aa8.7□□□□□ -1.02
VCL-206ENST00000623461 FAM122CQ6P4D5 195 aa8.7□□□□□ -1.02
VCL-206ENST00000623461 IGDCC3Q8IVU1 814 aa8.7□□□□□ -1.02
VCL-206ENST00000623461 ZNF248Q8NDW4 579 aa8.7□□□□□ -1.02
VCL-206ENST00000623461 DENND6BQ8NEG7 585 aa8.7□□□□□ -1.02
VCL-206ENST00000623461 ELAC1Q9H777 363 aaKnown RBP8.7□□□□□ -1.02
VCL-206ENST00000623461 ITM2CQ9NQX7 267 aa8.7□□□□□ -1.02
VCL-206ENST00000623461 PRKAB1Q9Y478 270 aa8.7□□□□□ -1.02
VCL-206ENST00000623461 KMOO15229 486 aa8.7□□□□□ -1.02
VCL-206ENST00000623461 KIAA0513O60268 411 aa8.7□□□□□ -1.02
VCL-206ENST00000623461 CHRNB1P11230 501 aa8.7□□□□□ -1.02
VCL-206ENST00000623461 ASPAP45381 313 aa8.7□□□□□ -1.02
VCL-206ENST00000623461 PYROXD2Q8N2H3 581 aa8.7□□□□□ -1.02
VCL-206ENST00000623461 OR9I1Q8NGQ6 314 aa8.7□□□□□ -1.02
VCL-206ENST00000623461 TMEM203Q969S6 136 aa8.7□□□□□ -1.02
VCL-206ENST00000623461 COL26A1Q96A83 441 aa8.7□□□□□ -1.02
VCL-206ENST00000623461 TMEM74Q96NL1 305 aa8.7□□□□□ -1.02
VCL-206ENST00000623461 NDUFAF4Q9P032 175 aa8.7□□□□□ -1.02
VCL-206ENST00000623461 TNFRSF10DQ9UBN6 386 aa8.7□□□□□ -1.02
VCL-206ENST00000623461 PCDHGA11Q9Y5H2 935 aa8.7□□□□□ -1.02
VCL-206ENST00000623461 TRPV2Q9Y5S1 764 aa8.7□□□□□ -1.02
VCL-206ENST00000623461 MYH7BA7E2Y1 1941 aa8.7□□□□□ -1.02
VCL-206ENST00000623461 BCAS1O75363 584 aaPredicted RBP8.7□□□□□ -1.02
VCL-206ENST00000623461 AHSGP02765 367 aa8.7□□□□□ -1.02
VCL-206ENST00000623461 PRKACGP22612 351 aa8.7□□□□□ -1.02
VCL-206ENST00000623461 DCKP27707 260 aa8.7□□□□□ -1.02
VCL-206ENST00000623461 CCR4P51679 360 aa8.7□□□□□ -1.02
VCL-206ENST00000623461 AGAP7PQ5VUJ5 663 aa8.7□□□□□ -1.02
VCL-206ENST00000623461 SLC15A3Q8IY34 581 aa8.7□□□□□ -1.02
VCL-206ENST00000623461 RPLP0P6Q8NHW5 317 aa8.7□□□□□ -1.02
VCL-206ENST00000623461 ZDHHC6Q9H6R6 413 aa8.7□□□□□ -1.02
VCL-206ENST00000623461 MS4A12Q9NXJ0 267 aa8.7□□□□□ -1.02
VCL-206ENST00000623461 STUB1Q9UNE7 303 aa8.7□□□□□ -1.02
VCL-206ENST00000623461 MGAT4BQ9UQ53 548 aa8.7□□□□□ -1.02
VCL-206ENST00000623461 HCN4Q9Y3Q4 1203 aa8.7□□□□□ -1.02
VCL-206ENST00000623461 KIF13AQ9H1H9 1805 aa8.7□□□□□ -1.02
VCL-206ENST00000623461 ZNF142P52746 1687 aaPredicted RBP8.7□□□□□ -1.02
VCL-206ENST00000623461 EEDO75530 441 aaKnown RBP8.7□□□□□ -1.02
VCL-206ENST00000623461 ERAL1O75616 437 aaKnown RBP8.7□□□□□ -1.02
VCL-206ENST00000623461 H1F0P07305 194 aaKnown RBP8.7□□□□□ -1.02
VCL-206ENST00000623461 ZNF14P17017 642 aaPredicted RBP8.7□□□□□ -1.02
VCL-206ENST00000623461 SPAM1P38567 509 aa8.7□□□□□ -1.02
VCL-206ENST00000623461 KHKP50053 298 aa8.7□□□□□ -1.02
VCL-206ENST00000623461 ZNF132P52740 706 aa8.7□□□□□ -1.02
VCL-206ENST00000623461 RPS3AP61247 264 aaKnown RBP8.7□□□□□ -1.02
VCL-206ENST00000623461 ST3GAL4Q11206 333 aa8.7□□□□□ -1.02
VCL-206ENST00000623461 DSG2Q14126 1118 aa8.7□□□□□ -1.02
VCL-206ENST00000623461 DESI1Q6ICB0 168 aa8.7□□□□□ -1.02
VCL-206ENST00000623461 ANKRD54Q6NXT1 300 aa8.7□□□□□ -1.02
VCL-206ENST00000623461 PTF1AQ7RTS3 328 aa8.7□□□□□ -1.02
VCL-206ENST00000623461 NAT16Q8N8M0 369 aa8.7□□□□□ -1.02
VCL-206ENST00000623461 SIDT2Q8NBJ9 832 aaKnown RBP8.7□□□□□ -1.02
VCL-206ENST00000623461 ASB15Q8WXK1 588 aa8.7□□□□□ -1.02
VCL-206ENST00000623461 CIDECQ96AQ7 238 aaPredicted RBP8.7□□□□□ -1.02
VCL-206ENST00000623461 TMEM181Q9P2C4 612 aa8.7□□□□□ -1.02
VCL-206ENST00000623461 PCDHGB5Q9Y5G0 923 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms