RNA–Protein interactions for RNA: ENST00000622668.4

HDAC9-229, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-229ENST00000622668 DHRS7Q9Y394 339 aa8.82□□□□□ -1
HDAC9-229ENST00000622668 PCDHGA2Q9Y5H1 932 aa8.82□□□□□ -1
HDAC9-229ENST00000622668 KRT87PA6NCN2 255 aa8.82□□□□□ -1
HDAC9-229ENST00000622668 GLOD5A6NK44 160 aa8.82□□□□□ -1
HDAC9-229ENST00000622668 HDAC3O15379 428 aa8.82□□□□□ -1
HDAC9-229ENST00000622668 ATP5HO75947 161 aa8.82□□□□□ -1
HDAC9-229ENST00000622668 ENGP17813 658 aa8.82□□□□□ -1
HDAC9-229ENST00000622668 PTGIRP43119 386 aa8.82□□□□□ -1
HDAC9-229ENST00000622668 ASMTP46597 345 aa8.82□□□□□ -1
HDAC9-229ENST00000622668 PSMD4P55036 377 aaKnown RBP8.82□□□□□ -1
HDAC9-229ENST00000622668 HMGCS1Q01581 520 aa8.82□□□□□ -1
HDAC9-229ENST00000622668 FRG1Q14331 258 aaKnown RBP8.82□□□□□ -1
HDAC9-229ENST00000622668 ZNF267Q14586 743 aaPredicted RBP8.82□□□□□ -1
HDAC9-229ENST00000622668 PRSS36Q5K4E3 855 aa8.82□□□□□ -1
HDAC9-229ENST00000622668 C6orf132Q5T0Z8 1188 aa8.82□□□□□ -1
HDAC9-229ENST00000622668 ABHD17BQ5VST6 288 aa8.82□□□□□ -1
HDAC9-229ENST00000622668 IL23RQ5VWK5 629 aa8.82□□□□□ -1
HDAC9-229ENST00000622668 CD300LGQ6UXG3 332 aa8.82□□□□□ -1
HDAC9-229ENST00000622668 GCNT7Q6ZNI0 430 aa8.82□□□□□ -1
HDAC9-229ENST00000622668 P4HA3Q7Z4N8 544 aa8.82□□□□□ -1
HDAC9-229ENST00000622668 ASPGQ86U10 573 aa8.82□□□□□ -1
HDAC9-229ENST00000622668 RAB43Q86YS6 212 aa8.82□□□□□ -1
HDAC9-229ENST00000622668 RNF148Q8N7C7 305 aa8.82□□□□□ -1
HDAC9-229ENST00000622668 POU5F2Q8N7G0 328 aa8.82□□□□□ -1
HDAC9-229ENST00000622668 CLEC1AQ8NC01 280 aa8.82□□□□□ -1
HDAC9-229ENST00000622668 PNPT1Q8TCS8 783 aaKnown RBP8.82□□□□□ -1
HDAC9-229ENST00000622668 TMEM174Q8WUU8 243 aa8.82□□□□□ -1
HDAC9-229ENST00000622668 ZNF75CPQ92670 426 aaPredicted RBP8.82□□□□□ -1
HDAC9-229ENST00000622668 CMTM7Q96FZ5 175 aa8.82□□□□□ -1
HDAC9-229ENST00000622668 LGR4Q9BXB1 951 aa8.82□□□□□ -1
HDAC9-229ENST00000622668 TBL1XR1Q9BZK7 514 aa8.82□□□□□ -1
HDAC9-229ENST00000622668 TFB2MQ9H5Q4 396 aaKnown RBP8.82□□□□□ -1
HDAC9-229ENST00000622668 KRCC1Q9NPI7 259 aaPredicted RBP8.82□□□□□ -1
HDAC9-229ENST00000622668 WSB2Q9NYS7 404 aaPredicted RBP8.82□□□□□ -1
HDAC9-229ENST00000622668 KLRF1Q9NZS2 232 aa8.82□□□□□ -1
HDAC9-229ENST00000622668 ATXN7L1Q9ULK2 861 aaPredicted RBP8.82□□□□□ -1
HDAC9-229ENST00000622668 MYO10Q9HD67 2058 aa8.82□□□□□ -1
HDAC9-229ENST00000622668 MYOCOSA0A1B0GUC4 107 aa8.82□□□□□ -1
HDAC9-229ENST00000622668 GSNP06396 782 aa8.82□□□□□ -1
HDAC9-229ENST00000622668 KLK1P06870 262 aa8.82□□□□□ -1
HDAC9-229ENST00000622668 RRM2P31350 389 aa8.82□□□□□ -1
HDAC9-229ENST00000622668 MMP12P39900 470 aa8.82□□□□□ -1
HDAC9-229ENST00000622668 TRPC1P48995 793 aa8.82□□□□□ -1
HDAC9-229ENST00000622668 OR4D2P58180 307 aa8.82□□□□□ -1
HDAC9-229ENST00000622668 CHRNB3Q05901 458 aa8.82□□□□□ -1
HDAC9-229ENST00000622668 BNIP3Q12983 259 aa8.82□□□□□ -1
HDAC9-229ENST00000622668 NSDHLQ15738 373 aa8.82□□□□□ -1
HDAC9-229ENST00000622668 TCTE1Q5JU00 501 aa8.82□□□□□ -1
HDAC9-229ENST00000622668 TBC1D21Q8IYX1 336 aa8.82□□□□□ -1
HDAC9-229ENST00000622668 NACC2Q96BF6 587 aa8.82□□□□□ -1
HDAC9-229ENST00000622668 MCCC2Q9HCC0 563 aa8.82□□□□□ -1
HDAC9-229ENST00000622668 ACTR10Q9NZ32 417 aa8.82□□□□□ -1
HDAC9-229ENST00000622668 RAP2CQ9Y3L5 183 aa8.82□□□□□ -1
HDAC9-229ENST00000622668 DCDC2BA2VCK2 349 aa8.81□□□□□ -1
HDAC9-229ENST00000622668 ARHGAP33O14559 1287 aa8.81□□□□□ -1
HDAC9-229ENST00000622668 FLRT2O43155 660 aa8.81□□□□□ -1
HDAC9-229ENST00000622668 PCDH7O60245 1069 aa8.81□□□□□ -1
HDAC9-229ENST00000622668 CDC40O60508 579 aaKnown RBP eCLIP8.81□□□□□ -1
HDAC9-229ENST00000622668 C8orf89P0DMQ9 161 aa8.81□□□□□ -1
HDAC9-229ENST00000622668 CSNK1DP48730 415 aa8.81□□□□□ -1
HDAC9-229ENST00000622668 PRR5P85299 388 aa8.81□□□□□ -1
HDAC9-229ENST00000622668 CAMK1Q14012 370 aa8.81□□□□□ -1
HDAC9-229ENST00000622668 COX18Q8N8Q8 333 aa8.81□□□□□ -1
HDAC9-229ENST00000622668 OR4A15Q8NGL6 344 aa8.81□□□□□ -1
HDAC9-229ENST00000622668 OR1E3Q8WZA6 343 aa8.81□□□□□ -1
HDAC9-229ENST00000622668 CCT8L2Q96SF2 557 aa8.81□□□□□ -1
HDAC9-229ENST00000622668 CCDC90BQ9GZT6 254 aa8.81□□□□□ -1
HDAC9-229ENST00000622668 MBNL1Q9NR56 388 aaKnown RBP8.81□□□□□ -1
HDAC9-229ENST00000622668 PRTFDC1Q9NRG1 225 aa8.81□□□□□ -1
HDAC9-229ENST00000622668 HS3ST3A1Q9Y663 406 aa8.81□□□□□ -1
HDAC9-229ENST00000622668 RNF215Q9Y6U7 377 aa8.81□□□□□ -1
HDAC9-229ENST00000622668 RP1P56715 2156 aa8.81□□□□□ -1
HDAC9-229ENST00000622668 CSNK2A2P19784 350 aaPredicted RBP8.81□□□□□ -1
HDAC9-229ENST00000622668 SLC7A1P30825 629 aa8.81□□□□□ -1
HDAC9-229ENST00000622668 LSP1P33241 339 aa8.81□□□□□ -1
HDAC9-229ENST00000622668 CD68P34810 354 aaPredicted RBP8.81□□□□□ -1
HDAC9-229ENST00000622668 FOLR3P41439 243 aa8.81□□□□□ -1
HDAC9-229ENST00000622668 ARSFP54793 590 aa8.81□□□□□ -1
HDAC9-229ENST00000622668 INHBCP55103 352 aa8.81□□□□□ -1
HDAC9-229ENST00000622668 PKNOX1P55347 436 aa8.81□□□□□ -1
HDAC9-229ENST00000622668 TBPL1P62380 186 aa8.81□□□□□ -1
HDAC9-229ENST00000622668 NFKB2Q00653 900 aa8.81□□□□□ -1
HDAC9-229ENST00000622668 CSTF3Q12996 717 aaKnown RBP8.81□□□□□ -1
HDAC9-229ENST00000622668 CYP1B1Q16678 543 aa8.81□□□□□ -1
HDAC9-229ENST00000622668 NKAIN2Q5VXU1 208 aa8.81□□□□□ -1
HDAC9-229ENST00000622668 FRG2Q64ET8 278 aa8.81□□□□□ -1
HDAC9-229ENST00000622668 TCEAL6Q6IPX3 200 aa8.81□□□□□ -1
HDAC9-229ENST00000622668 RAB11FIP2Q7L804 512 aa8.81□□□□□ -1
HDAC9-229ENST00000622668 KLHL6Q8WZ60 621 aa8.81□□□□□ -1
HDAC9-229ENST00000622668 TCEAL3Q969E4 200 aa8.81□□□□□ -1
HDAC9-229ENST00000622668 RSPRY1Q96DX4 576 aa8.81□□□□□ -1
HDAC9-229ENST00000622668 SIGLEC10Q96LC7 697 aa8.81□□□□□ -1
HDAC9-229ENST00000622668 FRG2BQ96QU4 278 aa8.81□□□□□ -1
HDAC9-229ENST00000622668 ZCCHC3Q9NUD5 404 aaKnown RBP8.81□□□□□ -1
HDAC9-229ENST00000622668 SLC17A7Q9P2U7 560 aa8.81□□□□□ -1
HDAC9-229ENST00000622668 VPS4AQ9UN37 437 aa8.81□□□□□ -1
HDAC9-229ENST00000622668 NFS1Q9Y697 457 aa8.81□□□□□ -1
HDAC9-229ENST00000622668 MPIP34949 423 aa8.81□□□□□ -1
HDAC9-229ENST00000622668 CLNS1AP54105 237 aaKnown RBP8.81□□□□□ -1
HDAC9-229ENST00000622668 RPP38P78345 283 aaKnown RBP8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms