RNA–Protein interactions for RNA: ENST00000620996.4

VTA1-205, Transcript of vesicle trafficking 1, humanhuman

TSL 3 BASIC

Gene VTA1, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-205ENST00000620996 PRAMEF9Q5VWM5 478 aa9.63□□□□□ -0.87
VTA1-205ENST00000620996 NCCRP1Q6ZVX7 275 aaPredicted RBP9.63□□□□□ -0.87
VTA1-205ENST00000620996 RD3Q7Z3Z2 195 aa9.63□□□□□ -0.87
VTA1-205ENST00000620996 PGBD3Q8N328 593 aa9.63□□□□□ -0.87
VTA1-205ENST00000620996 OR2T3Q8NH03 318 aa9.63□□□□□ -0.87
VTA1-205ENST00000620996 ZNF480Q8WV37 535 aa9.63□□□□□ -0.87
VTA1-205ENST00000620996 NRTNQ99748 197 aa9.63□□□□□ -0.87
VTA1-205ENST00000620996 THUMPD3Q9BV44 507 aaKnown RBP9.63□□□□□ -0.87
VTA1-205ENST00000620996 GULP1Q9UBP9 304 aa9.63□□□□□ -0.87
VTA1-205ENST00000620996 SLC23A2Q9UGH3 650 aa9.63□□□□□ -0.87
VTA1-205ENST00000620996 KCNK6Q9Y257 313 aa9.63□□□□□ -0.87
VTA1-205ENST00000620996 PLXNA2O75051 1894 aa9.63□□□□□ -0.87
VTA1-205ENST00000620996 SAP18O00422 153 aaKnown RBP9.62□□□□□ -0.87
VTA1-205ENST00000620996 AXIN1O15169 862 aa9.62□□□□□ -0.87
VTA1-205ENST00000620996 RNGTTO60942 597 aaKnown RBP9.62□□□□□ -0.87
VTA1-205ENST00000620996 JUPP14923 745 aa9.62□□□□□ -0.87
VTA1-205ENST00000620996 CAMK2GQ13555 558 aaPredicted RBP9.62□□□□□ -0.87
VTA1-205ENST00000620996 CATSPEREQ5SY80 951 aa9.62□□□□□ -0.87
VTA1-205ENST00000620996 METTL2BQ6P1Q9 378 aaKnown RBP9.62□□□□□ -0.87
VTA1-205ENST00000620996 HACD2Q6Y1H2 254 aa9.62□□□□□ -0.87
VTA1-205ENST00000620996 RNF111Q6ZNA4 994 aa9.62□□□□□ -0.87
VTA1-205ENST00000620996 NLRP8Q86W28 1048 aa9.62□□□□□ -0.87
VTA1-205ENST00000620996 SYT12Q8IV01 421 aa9.62□□□□□ -0.87
VTA1-205ENST00000620996 PQLC1Q8N2U9 271 aa9.62□□□□□ -0.87
VTA1-205ENST00000620996 GALNT4Q8N4A0 578 aa9.62□□□□□ -0.87
VTA1-205ENST00000620996 OR2L2Q8NH16 312 aa9.62□□□□□ -0.87
VTA1-205ENST00000620996 SLC13A3Q8WWT9 602 aa9.62□□□□□ -0.87
VTA1-205ENST00000620996 USP7Q93009 1102 aa9.62□□□□□ -0.87
VTA1-205ENST00000620996 NEIL2Q969S2 332 aa9.62□□□□□ -0.87
VTA1-205ENST00000620996 OR52E6Q96RD3 313 aa9.62□□□□□ -0.87
VTA1-205ENST00000620996 KLHL4Q9C0H6 718 aa9.62□□□□□ -0.87
VTA1-205ENST00000620996 VCX3BQ9H321 246 aa9.62□□□□□ -0.87
VTA1-205ENST00000620996 USP22Q9UPT9 525 aa9.62□□□□□ -0.87
VTA1-205ENST00000620996 SNX13Q9Y5W8 968 aa9.62□□□□□ -0.87
VTA1-205ENST00000620996 H3BNX3 289 aa9.62□□□□□ -0.87
VTA1-205ENST00000620996 FXYD1O00168 92 aa9.62□□□□□ -0.87
VTA1-205ENST00000620996 ACOT8O14734 319 aa9.62□□□□□ -0.87
VTA1-205ENST00000620996 PAPLNO95428 1278 aa9.62□□□□□ -0.87
VTA1-205ENST00000620996 GSNP06396 782 aa9.62□□□□□ -0.87
VTA1-205ENST00000620996 ASGR2P07307 311 aa9.62□□□□□ -0.87
VTA1-205ENST00000620996 SLC35G4P0C7Q5 338 aa9.62□□□□□ -0.87
VTA1-205ENST00000620996 EFNA1P20827 205 aaPredicted RBP9.62□□□□□ -0.87
VTA1-205ENST00000620996 COL9A1P20849 921 aa9.62□□□□□ -0.87
VTA1-205ENST00000620996 KIR2DL1P43626 348 aaPredicted RBP9.62□□□□□ -0.87
VTA1-205ENST00000620996 CLCNKAP51800 687 aa9.62□□□□□ -0.87
VTA1-205ENST00000620996 GRSF1Q12849 480 aaKnown RBP eCLIP9.62□□□□□ -0.87
VTA1-205ENST00000620996 HTR4Q13639 388 aa9.62□□□□□ -0.87
VTA1-205ENST00000620996 TRIM46Q7Z4K8 759 aa9.62□□□□□ -0.87
VTA1-205ENST00000620996 ICA1LQ8NDH6 482 aa9.62□□□□□ -0.87
VTA1-205ENST00000620996 OR9A1PQ8NGU1 263 aa9.62□□□□□ -0.87
VTA1-205ENST00000620996 TFGQ92734 400 aaPredicted RBP9.62□□□□□ -0.87
VTA1-205ENST00000620996 SIPA1Q96FS4 1042 aa9.62□□□□□ -0.87
VTA1-205ENST00000620996 OR4K3Q96R72 315 aa9.62□□□□□ -0.87
VTA1-205ENST00000620996 ALG2Q9H553 416 aa9.62□□□□□ -0.87
VTA1-205ENST00000620996 ACTL8Q9H568 366 aa9.62□□□□□ -0.87
VTA1-205ENST00000620996 PHPT1Q9NRX4 125 aaPredicted RBP9.62□□□□□ -0.87
VTA1-205ENST00000620996 IMP3Q9NV31 184 aaKnown RBP9.62□□□□□ -0.87
VTA1-205ENST00000620996 TRPM6Q9BX84 2022 aa9.62□□□□□ -0.87
VTA1-205ENST00000620996 KANSL1LA0AUZ9 987 aa9.62□□□□□ -0.87
VTA1-205ENST00000620996 PDZK1P1A8MUH7 402 aa9.62□□□□□ -0.87
VTA1-205ENST00000620996 ARNTLO00327 626 aa9.62□□□□□ -0.87
VTA1-205ENST00000620996 LILRB5O75023 590 aa9.62□□□□□ -0.87
VTA1-205ENST00000620996 KCNH1O95259 989 aa9.62□□□□□ -0.87
VTA1-205ENST00000620996 CD22P20273 847 aa9.62□□□□□ -0.87
VTA1-205ENST00000620996 ATP6V1B2P21281 511 aa9.62□□□□□ -0.87
VTA1-205ENST00000620996 ATP6V1C1P21283 382 aa9.62□□□□□ -0.87
VTA1-205ENST00000620996 TACR1P25103 407 aa9.62□□□□□ -0.87
VTA1-205ENST00000620996 LTBRP36941 435 aa9.62□□□□□ -0.87
VTA1-205ENST00000620996 TNFRSF4P43489 277 aa9.62□□□□□ -0.87
VTA1-205ENST00000620996 ACSM2AQ08AH3 577 aa9.62□□□□□ -0.87
VTA1-205ENST00000620996 DMPKQ09013 629 aa9.62□□□□□ -0.87
VTA1-205ENST00000620996 SLBPQ14493 270 aaKnown RBP eCLIP9.62□□□□□ -0.87
VTA1-205ENST00000620996 SMUG1Q53HV7 270 aa9.62□□□□□ -0.87
VTA1-205ENST00000620996 COL13A1Q5TAT6 717 aaPredicted RBP9.62□□□□□ -0.87
VTA1-205ENST00000620996 ACSM2BQ68CK6 577 aa9.62□□□□□ -0.87
VTA1-205ENST00000620996 ZFP1Q6P2D0 407 aa9.62□□□□□ -0.87
VTA1-205ENST00000620996 MINDY1Q8N5J2 469 aa9.62□□□□□ -0.87
VTA1-205ENST00000620996 IL17RCQ8NAC3 791 aa9.62□□□□□ -0.87
VTA1-205ENST00000620996 SLC35B4Q969S0 331 aa9.62□□□□□ -0.87
VTA1-205ENST00000620996 EGLN2Q96KS0 407 aa9.62□□□□□ -0.87
VTA1-205ENST00000620996 PHF12Q96QT6 1004 aa9.62□□□□□ -0.87
VTA1-205ENST00000620996 PKP2Q99959 881 aa9.62□□□□□ -0.87
VTA1-205ENST00000620996 ECSITQ9BQ95 431 aa9.62□□□□□ -0.87
VTA1-205ENST00000620996 TBCDQ9BTW9 1192 aa9.62□□□□□ -0.87
VTA1-205ENST00000620996 TRIM15Q9C019 465 aa9.62□□□□□ -0.87
VTA1-205ENST00000620996 EPHX3Q9H6B9 360 aa9.62□□□□□ -0.87
VTA1-205ENST00000620996 CCDC177Q9NQR7 707 aaPredicted RBP9.62□□□□□ -0.87
VTA1-205ENST00000620996 NDRG2Q9UN36 371 aaKnown RBP9.62□□□□□ -0.87
VTA1-205ENST00000620996 ZFR2Q9UPR6 939 aaKnown RBP9.62□□□□□ -0.87
VTA1-205ENST00000620996 DTNAQ9Y4J8 743 aa9.62□□□□□ -0.87
VTA1-205ENST00000620996 CCL27Q9Y4X3 112 aa9.62□□□□□ -0.87
VTA1-205ENST00000620996 AP4S1Q9Y587 144 aa9.62□□□□□ -0.87
VTA1-205ENST00000620996 NUMA1Q14980 2115 aa9.61□□□□□ -0.87
VTA1-205ENST00000620996 GNG14A0A1W2PPG7 69 aa9.61□□□□□ -0.87
VTA1-205ENST00000620996 ARHGAP10A1A4S6 786 aa9.61□□□□□ -0.87
VTA1-205ENST00000620996 MYO1DO94832 1006 aa9.61□□□□□ -0.87
VTA1-205ENST00000620996 MAPK1P28482 360 aa9.61□□□□□ -0.87
VTA1-205ENST00000620996 S100A3P33764 101 aa9.61□□□□□ -0.87
VTA1-205ENST00000620996 GSK3BP49841 420 aa9.61□□□□□ -0.87
VTA1-205ENST00000620996 RPS21P63220 83 aaKnown RBP9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 1995.7 ms