RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 ZDHHC11BP0C7U3 371 aa19.03■□□□□ 0.64
PDLIM3-212ENST00000620787 IFITM2Q01629 132 aa19.03■□□□□ 0.64
PDLIM3-212ENST00000620787 CPSF6Q16630 551 aaKnown RBP eCLIP19.03■□□□□ 0.64
PDLIM3-212ENST00000620787 CTXN3Q4LDR2 81 aa19.03■□□□□ 0.64
PDLIM3-212ENST00000620787 NCEH1Q6PIU2 408 aa19.03■□□□□ 0.64
PDLIM3-212ENST00000620787 CLDN19Q8N6F1 224 aa19.03■□□□□ 0.64
PDLIM3-212ENST00000620787 FCGR1BQ92637 280 aa19.03■□□□□ 0.64
PDLIM3-212ENST00000620787 HHIPQ96QV1 700 aa19.03■□□□□ 0.64
PDLIM3-212ENST00000620787 C6orf62Q9GZU0 229 aaPredicted RBP19.03■□□□□ 0.64
PDLIM3-212ENST00000620787 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP19.03■□□□□ 0.64
PDLIM3-212ENST00000620787 RNF6Q9Y252 685 aa19.03■□□□□ 0.64
PDLIM3-212ENST00000620787 PRG3Q9Y2Y8 225 aaPredicted RBP19.03■□□□□ 0.64
PDLIM3-212ENST00000620787 ZNF106Q9H2Y7 1883 aaKnown RBP19.03■□□□□ 0.64
PDLIM3-212ENST00000620787 ILVBLA1L0T0 632 aa19.03■□□□□ 0.64
PDLIM3-212ENST00000620787 PGLSO95336 258 aa19.03■□□□□ 0.64
PDLIM3-212ENST00000620787 PTTG1O95997 202 aa19.03■□□□□ 0.64
PDLIM3-212ENST00000620787 KRT6AP02538 564 aa19.03■□□□□ 0.64
PDLIM3-212ENST00000620787 KRT6BP04259 564 aa19.03■□□□□ 0.64
PDLIM3-212ENST00000620787 PRPS2P11908 318 aa19.03■□□□□ 0.64
PDLIM3-212ENST00000620787 PTPN2P17706 415 aa19.03■□□□□ 0.64
PDLIM3-212ENST00000620787 SDC1P18827 310 aa19.03■□□□□ 0.64
PDLIM3-212ENST00000620787 EPORP19235 508 aa19.03■□□□□ 0.64
PDLIM3-212ENST00000620787 KRT6CP48668 564 aa19.03■□□□□ 0.64
PDLIM3-212ENST00000620787 ARF5P84085 180 aa19.03■□□□□ 0.64
PDLIM3-212ENST00000620787 VMACQ2NL98 169 aa19.03■□□□□ 0.64
PDLIM3-212ENST00000620787 CCDC80Q76M96 950 aa19.03■□□□□ 0.64
PDLIM3-212ENST00000620787 HSH2DQ96JZ2 352 aa19.03■□□□□ 0.64
PDLIM3-212ENST00000620787 CLSTN3Q9BQT9 956 aa19.03■□□□□ 0.64
PDLIM3-212ENST00000620787 GPR63Q9BZJ6 419 aa19.03■□□□□ 0.64
PDLIM3-212ENST00000620787 THUMPD1Q9NXG2 353 aaKnown RBP19.03■□□□□ 0.64
PDLIM3-212ENST00000620787 RPS6KA6Q9UK32 745 aa19.03■□□□□ 0.64
PDLIM3-212ENST00000620787 PCDHGA6Q9Y5G7 932 aa19.03■□□□□ 0.64
PDLIM3-212ENST00000620787 A3GALT2U3KPV4 340 aa19.03■□□□□ 0.64
PDLIM3-212ENST00000620787 TMEM189-UBE2V1I3L0A0 370 aa19.02■□□□□ 0.64
PDLIM3-212ENST00000620787 PSMD11O00231 422 aa19.02■□□□□ 0.64
PDLIM3-212ENST00000620787 DSCR3O14972 297 aa19.02■□□□□ 0.64
PDLIM3-212ENST00000620787 CLDN11O75508 207 aa19.02■□□□□ 0.64
PDLIM3-212ENST00000620787 ARHGEF15O94989 841 aa19.02■□□□□ 0.64
PDLIM3-212ENST00000620787 LRATO95237 230 aa19.02■□□□□ 0.64
PDLIM3-212ENST00000620787 CLDN9O95484 217 aa19.02■□□□□ 0.64
PDLIM3-212ENST00000620787 PRAMEF1O95521 474 aa19.02■□□□□ 0.64
PDLIM3-212ENST00000620787 GTF2E2P29084 291 aaKnown RBP19.02■□□□□ 0.64
PDLIM3-212ENST00000620787 HMGCLP35914 325 aa19.02■□□□□ 0.64
PDLIM3-212ENST00000620787 CTSKP43235 329 aa19.02■□□□□ 0.64
PDLIM3-212ENST00000620787 OR1G1P47890 313 aa19.02■□□□□ 0.64
PDLIM3-212ENST00000620787 NKX2-5P52952 324 aaPredicted RBP19.02■□□□□ 0.64
PDLIM3-212ENST00000620787 ITGA1P56199 1179 aa19.02■□□□□ 0.64
PDLIM3-212ENST00000620787 ARPP19P56211 112 aa19.02■□□□□ 0.64
PDLIM3-212ENST00000620787 CAMK2GQ13555 558 aaPredicted RBP19.02■□□□□ 0.64
PDLIM3-212ENST00000620787 OR4F3Q6IEY1 312 aa19.02■□□□□ 0.64
PDLIM3-212ENST00000620787 METTL2BQ6P1Q9 378 aaKnown RBP19.02■□□□□ 0.64
PDLIM3-212ENST00000620787 PNCKQ6P2M8 343 aa19.02■□□□□ 0.64
PDLIM3-212ENST00000620787 LINGO4Q6UY18 593 aa19.02■□□□□ 0.64
PDLIM3-212ENST00000620787 USP43Q70EL4 1123 aa19.02■□□□□ 0.64
PDLIM3-212ENST00000620787 ZBTB2Q8N680 514 aa19.02■□□□□ 0.64
PDLIM3-212ENST00000620787 COPS4Q9BT78 406 aa19.02■□□□□ 0.64
PDLIM3-212ENST00000620787 RETREG1Q9H6L5 497 aa19.02■□□□□ 0.64
PDLIM3-212ENST00000620787 KCNK5O95279 499 aa19.01■□□□□ 0.63
PDLIM3-212ENST00000620787 DBTP11182 482 aaKnown RBP19.01■□□□□ 0.63
PDLIM3-212ENST00000620787 CTPS1P17812 591 aa19.01■□□□□ 0.63
PDLIM3-212ENST00000620787 C21orf33P30042 268 aaPredicted RBP19.01■□□□□ 0.63
PDLIM3-212ENST00000620787 KDELR2P33947 212 aa19.01■□□□□ 0.63
PDLIM3-212ENST00000620787 BMPR1AP36894 532 aa19.01■□□□□ 0.63
PDLIM3-212ENST00000620787 CASP3P42574 277 aa19.01■□□□□ 0.63
PDLIM3-212ENST00000620787 TWF1Q12792 350 aa19.01■□□□□ 0.63
PDLIM3-212ENST00000620787 TBCEQ15813 527 aaPredicted RBP19.01■□□□□ 0.63
PDLIM3-212ENST00000620787 TPRG1LQ5T0D9 272 aa19.01■□□□□ 0.63
PDLIM3-212ENST00000620787 GPRC6AQ5T6X5 926 aa19.01■□□□□ 0.63
PDLIM3-212ENST00000620787 DESI1Q6ICB0 168 aa19.01■□□□□ 0.63
PDLIM3-212ENST00000620787 Q8N9G6 341 aaPredicted RBP19.01■□□□□ 0.63
PDLIM3-212ENST00000620787 PROX1Q92786 737 aa19.01■□□□□ 0.63
PDLIM3-212ENST00000620787 HRASLS5Q96KN8 279 aa19.01■□□□□ 0.63
PDLIM3-212ENST00000620787 EGLN2Q96KS0 407 aa19.01■□□□□ 0.63
PDLIM3-212ENST00000620787 SEPT5Q99719 369 aaPredicted RBP19.01■□□□□ 0.63
PDLIM3-212ENST00000620787 CDADC1Q9BWV3 514 aa19.01■□□□□ 0.63
PDLIM3-212ENST00000620787 SPATA7Q9P0W8 599 aa19.01■□□□□ 0.63
PDLIM3-212ENST00000620787 PCDHB9Q9Y5E1 797 aa19.01■□□□□ 0.63
PDLIM3-212ENST00000620787 CEP350Q5VT06 3117 aa19.01■□□□□ 0.63
PDLIM3-212ENST00000620787 EVPLLA8MZ36 301 aa19.01■□□□□ 0.63
PDLIM3-212ENST00000620787 FAM47E-STBD1D6RA91 191 aa19.01■□□□□ 0.63
PDLIM3-212ENST00000620787 ASNA1O43681 348 aa19.01■□□□□ 0.63
PDLIM3-212ENST00000620787 FZD6O60353 706 aa19.01■□□□□ 0.63
PDLIM3-212ENST00000620787 STK16O75716 305 aa19.01■□□□□ 0.63
PDLIM3-212ENST00000620787 VNN2O95498 520 aa19.01■□□□□ 0.63
PDLIM3-212ENST00000620787 ALPIP09923 528 aa19.01■□□□□ 0.63
PDLIM3-212ENST00000620787 GRK5P34947 590 aa19.01■□□□□ 0.63
PDLIM3-212ENST00000620787 NR4A2P43354 598 aa19.01■□□□□ 0.63
PDLIM3-212ENST00000620787 CBLL1Q75N03 491 aa19.01■□□□□ 0.63
PDLIM3-212ENST00000620787 EIF3MQ7L2H7 374 aaKnown RBP19.01■□□□□ 0.63
PDLIM3-212ENST00000620787 PTOV1Q86YD1 416 aa19.01■□□□□ 0.63
PDLIM3-212ENST00000620787 RASAL3Q86YV0 1011 aa19.01■□□□□ 0.63
PDLIM3-212ENST00000620787 RBFAQ8N0V3 343 aa19.01■□□□□ 0.63
PDLIM3-212ENST00000620787 NELL1Q92832 810 aa19.01■□□□□ 0.63
PDLIM3-212ENST00000620787 GABARAPL3Q9BY60 117 aa19.01■□□□□ 0.63
PDLIM3-212ENST00000620787 REEP1Q9H902 201 aa19.01■□□□□ 0.63
PDLIM3-212ENST00000620787 RDH14Q9HBH5 336 aa19.01■□□□□ 0.63
PDLIM3-212ENST00000620787 PSORS1C1Q9UIG5 152 aa19.01■□□□□ 0.63
PDLIM3-212ENST00000620787 MN1Q10571 1320 aaPredicted RBP19.01■□□□□ 0.63
PDLIM3-212ENST00000620787 DYRK3O43781 588 aa19■□□□□ 0.63
PDLIM3-212ENST00000620787 TCEA1P23193 301 aaKnown RBP19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms