RNA–Protein interactions for RNA: ENST00000620675.4

NEK3-210, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-210ENST00000620675 ARHGAP22Q7Z5H3 698 aa13.14□□□□□ -0.31
NEK3-210ENST00000620675 THOC6Q86W42 341 aaKnown RBP13.14□□□□□ -0.31
NEK3-210ENST00000620675 FBXO39Q8N4B4 442 aa13.14□□□□□ -0.31
NEK3-210ENST00000620675 ADAMTS14Q8WXS8 1223 aa13.14□□□□□ -0.31
NEK3-210ENST00000620675 NSUN5Q96P11 429 aaKnown RBP13.14□□□□□ -0.31
NEK3-210ENST00000620675 FAM60AQ9NP50 221 aa13.14□□□□□ -0.31
NEK3-210ENST00000620675 GRID1Q9ULK0 1009 aa13.14□□□□□ -0.31
NEK3-210ENST00000620675 CFAP47Q6ZTR5 3102 aa13.13□□□□□ -0.31
NEK3-210ENST00000620675 PABPN1LA6NDY0 278 aaKnown RBP13.13□□□□□ -0.31
NEK3-210ENST00000620675 KDM1AO60341 852 aa13.13□□□□□ -0.31
NEK3-210ENST00000620675 WDR47O94967 919 aa13.13□□□□□ -0.31
NEK3-210ENST00000620675 CDH3P22223 829 aa13.13□□□□□ -0.31
NEK3-210ENST00000620675 GGT5P36269 586 aa13.13□□□□□ -0.31
NEK3-210ENST00000620675 TARDBPQ13148 414 aaKnown RBP eCLIP13.13□□□□□ -0.31
NEK3-210ENST00000620675 SETDB1Q15047 1291 aa13.13□□□□□ -0.31
NEK3-210ENST00000620675 PRAMEF13Q5VWM6 474 aa13.13□□□□□ -0.31
NEK3-210ENST00000620675 ICE2Q659A1 982 aa13.13□□□□□ -0.31
NEK3-210ENST00000620675 RAB44Q7Z6P3 723 aaPredicted RBP13.13□□□□□ -0.31
NEK3-210ENST00000620675 RAB42Q8N4Z0 105 aa13.13□□□□□ -0.31
NEK3-210ENST00000620675 NEIL2Q969S2 332 aa13.13□□□□□ -0.31
NEK3-210ENST00000620675 ZDHHC12Q96GR4 267 aa13.13□□□□□ -0.31
NEK3-210ENST00000620675 FCRL4Q96PJ5 515 aa13.13□□□□□ -0.31
NEK3-210ENST00000620675 TRAPPC9Q96Q05 1148 aa13.13□□□□□ -0.31
NEK3-210ENST00000620675 SPNS1Q9H2V7 528 aa13.13□□□□□ -0.31
NEK3-210ENST00000620675 CLCA2Q9UQC9 943 aa13.13□□□□□ -0.31
NEK3-210ENST00000620675 SDK2Q58EX2 2172 aa13.13□□□□□ -0.31
NEK3-210ENST00000620675 A0A1B0GTL3 188 aa13.12□□□□□ -0.31
NEK3-210ENST00000620675 TLCD2A6NGC4 264 aa13.12□□□□□ -0.31
NEK3-210ENST00000620675 GOLGA6L10A6NI86 522 aa13.12□□□□□ -0.31
NEK3-210ENST00000620675 SYCE1LA8MT33 242 aa13.12□□□□□ -0.31
NEK3-210ENST00000620675 PPP6CO00743 305 aa13.12□□□□□ -0.31
NEK3-210ENST00000620675 CCNT2O60583 730 aaKnown RBP13.12□□□□□ -0.31
NEK3-210ENST00000620675 TSPAN8P19075 237 aa13.12□□□□□ -0.31
NEK3-210ENST00000620675 EEF1DP29692 281 aaKnown RBP13.12□□□□□ -0.31
NEK3-210ENST00000620675 ETV4P43268 484 aa13.12□□□□□ -0.31
NEK3-210ENST00000620675 HNMTP50135 292 aa13.12□□□□□ -0.31
NEK3-210ENST00000620675 ALDH18A1P54886 795 aaKnown RBP13.12□□□□□ -0.31
NEK3-210ENST00000620675 MEF2AQ02078 507 aaPredicted RBP13.12□□□□□ -0.31
NEK3-210ENST00000620675 PCLAFQ15004 111 aa13.12□□□□□ -0.31
NEK3-210ENST00000620675 CATSPEREQ5SY80 951 aa13.12□□□□□ -0.31
NEK3-210ENST00000620675 FCRL6Q6DN72 434 aa13.12□□□□□ -0.31
NEK3-210ENST00000620675 CROCCP2Q86T23 111 aa13.12□□□□□ -0.31
NEK3-210ENST00000620675 LCA5Q86VQ0 697 aa13.12□□□□□ -0.31
NEK3-210ENST00000620675 PLD3Q8IV08 490 aa13.12□□□□□ -0.31
NEK3-210ENST00000620675 DCBLD1Q8N8Z6 715 aa13.12□□□□□ -0.31
NEK3-210ENST00000620675 PMEPA1Q969W9 287 aa13.12□□□□□ -0.31
NEK3-210ENST00000620675 PKNOX2Q96KN3 472 aa13.12□□□□□ -0.31
NEK3-210ENST00000620675 TMEM237Q96Q45 408 aa13.12□□□□□ -0.31
NEK3-210ENST00000620675 CD244Q9BZW8 370 aa13.12□□□□□ -0.31
NEK3-210ENST00000620675 OCIAD1Q9NX40 245 aa13.12□□□□□ -0.31
NEK3-210ENST00000620675 SENP1Q9P0U3 644 aa13.12□□□□□ -0.31
NEK3-210ENST00000620675 PCDHB11Q9Y5F2 797 aa13.12□□□□□ -0.31
NEK3-210ENST00000620675 APC2O95996 2303 aa13.12□□□□□ -0.31
NEK3-210ENST00000620675 ACACAQ13085 2346 aa13.12□□□□□ -0.31
NEK3-210ENST00000620675 A0A0J9YY10 115 aa13.12□□□□□ -0.31
NEK3-210ENST00000620675 H7BY64 318 aa13.12□□□□□ -0.31
NEK3-210ENST00000620675 STK16O75716 305 aa13.12□□□□□ -0.31
NEK3-210ENST00000620675 S100BP04271 92 aaPredicted RBP13.12□□□□□ -0.31
NEK3-210ENST00000620675 CDH1P12830 882 aa13.12□□□□□ -0.31
NEK3-210ENST00000620675 HSD17B2P37059 387 aa13.12□□□□□ -0.31
NEK3-210ENST00000620675 CCR10P46092 362 aa13.12□□□□□ -0.31
NEK3-210ENST00000620675 INHBCP55103 352 aa13.12□□□□□ -0.31
NEK3-210ENST00000620675 PRDX1Q06830 199 aaKnown RBP13.12□□□□□ -0.31
NEK3-210ENST00000620675 FOXC1Q12948 553 aa13.12□□□□□ -0.31
NEK3-210ENST00000620675 DEFB110Q30KQ9 67 aa13.12□□□□□ -0.31
NEK3-210ENST00000620675 AGBL2Q5U5Z8 902 aa13.12□□□□□ -0.31
NEK3-210ENST00000620675 CAPN13Q6MZZ7 669 aaPredicted RBP13.12□□□□□ -0.31
NEK3-210ENST00000620675 CCDC63Q8NA47 563 aa13.12□□□□□ -0.31
NEK3-210ENST00000620675 UBTD2Q8WUN7 234 aa13.12□□□□□ -0.31
NEK3-210ENST00000620675 ATL1Q8WXF7 558 aa13.12□□□□□ -0.31
NEK3-210ENST00000620675 ATP6V1G3Q96LB4 118 aa13.12□□□□□ -0.31
NEK3-210ENST00000620675 PRAP1Q96NZ9 151 aa13.12□□□□□ -0.31
NEK3-210ENST00000620675 DPH7Q9BTV6 452 aa13.12□□□□□ -0.31
NEK3-210ENST00000620675 ZBTB26Q9HCK0 441 aa13.12□□□□□ -0.31
NEK3-210ENST00000620675 KCNK9Q9NPC2 374 aa13.12□□□□□ -0.31
NEK3-210ENST00000620675 E7EQ34 232 aa13.11□□□□□ -0.31
NEK3-210ENST00000620675 ZW10O43264 779 aa13.11□□□□□ -0.31
NEK3-210ENST00000620675 CTSVO60911 334 aa13.11□□□□□ -0.31
NEK3-210ENST00000620675 CCL4P13236 92 aa13.11□□□□□ -0.31
NEK3-210ENST00000620675 ITIH1P19827 911 aa13.11□□□□□ -0.31
NEK3-210ENST00000620675 SLC5A12Q1EHB4 618 aa13.11□□□□□ -0.31
NEK3-210ENST00000620675 CDKL4Q5MAI5 379 aa13.11□□□□□ -0.31
NEK3-210ENST00000620675 ZYG11AQ6WRX3 759 aa13.11□□□□□ -0.31
NEK3-210ENST00000620675 PRSS42Q7Z5A4 293 aa13.11□□□□□ -0.31
NEK3-210ENST00000620675 C10orf107Q8IVU9 208 aa13.11□□□□□ -0.31
NEK3-210ENST00000620675 ZNF740Q8NDX6 193 aa13.11□□□□□ -0.31
NEK3-210ENST00000620675 IQCGQ9H095 443 aaKnown RBP13.11□□□□□ -0.31
NEK3-210ENST00000620675 MRPS30Q9NP92 439 aaKnown RBP13.11□□□□□ -0.31
NEK3-210ENST00000620675 C1GALT1Q9NS00 363 aa13.11□□□□□ -0.31
NEK3-210ENST00000620675 SEMA5BQ9P283 1151 aa13.11□□□□□ -0.31
NEK3-210ENST00000620675 COPG2Q9UBF2 871 aa13.11□□□□□ -0.31
NEK3-210ENST00000620675 ACTL7BQ9Y614 415 aa13.11□□□□□ -0.31
NEK3-210ENST00000620675 TMEM120BA0PK00 339 aa13.11□□□□□ -0.31
NEK3-210ENST00000620675 MATN2O00339 956 aa13.11□□□□□ -0.31
NEK3-210ENST00000620675 E2F3O00716 465 aa13.11□□□□□ -0.31
NEK3-210ENST00000620675 SMIM24O75264 130 aa13.11□□□□□ -0.31
NEK3-210ENST00000620675 IPO13O94829 963 aaKnown RBP13.11□□□□□ -0.31
NEK3-210ENST00000620675 EBLN1P0CF75 366 aa13.11□□□□□ -0.31
NEK3-210ENST00000620675 JUPP14923 745 aa13.11□□□□□ -0.31
NEK3-210ENST00000620675 FOLR1P15328 257 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms