RNA–Protein interactions for RNA: ENST00000615335.4

FOXN3-219, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-219ENST00000615335 PPP1R3AQ16821 1122 aa12.73□□□□□ -0.37
FOXN3-219ENST00000615335 FNDC3BQ53EP0 1204 aaKnown RBP12.73□□□□□ -0.37
FOXN3-219ENST00000615335 RBM48Q5RL73 367 aaKnown RBP12.73□□□□□ -0.37
FOXN3-219ENST00000615335 TXNDC11Q6PKC3 985 aa12.73□□□□□ -0.37
FOXN3-219ENST00000615335 KDELC1Q6UW63 502 aa12.73□□□□□ -0.37
FOXN3-219ENST00000615335 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.73□□□□□ -0.37
FOXN3-219ENST00000615335 SLC16A12Q6ZSM3 486 aa12.73□□□□□ -0.37
FOXN3-219ENST00000615335 Q6ZVU0 165 aa12.73□□□□□ -0.37
FOXN3-219ENST00000615335 USP51Q70EK9 711 aa12.73□□□□□ -0.37
FOXN3-219ENST00000615335 SPNS2Q8IVW8 549 aa12.73□□□□□ -0.37
FOXN3-219ENST00000615335 SVOPQ8N4V2 548 aa12.73□□□□□ -0.37
FOXN3-219ENST00000615335 OR5H6Q8NGV6 325 aa12.73□□□□□ -0.37
FOXN3-219ENST00000615335 DNASE1L2Q92874 299 aa12.73□□□□□ -0.37
FOXN3-219ENST00000615335 PHF21BQ96EK2 531 aa12.73□□□□□ -0.37
FOXN3-219ENST00000615335 TRIM39Q9HCM9 518 aa12.73□□□□□ -0.37
FOXN3-219ENST00000615335 NECTIN3Q9NQS3 549 aa12.73□□□□□ -0.37
FOXN3-219ENST00000615335 EVLQ9UI08 416 aaPredicted RBP12.73□□□□□ -0.37
FOXN3-219ENST00000615335 PCDHGC4Q9Y5F7 938 aa12.73□□□□□ -0.37
FOXN3-219ENST00000615335 H0YAE9 185 aa12.73□□□□□ -0.37
FOXN3-219ENST00000615335 TIPRLO75663 272 aa12.73□□□□□ -0.37
FOXN3-219ENST00000615335 GKP32189 559 aa12.73□□□□□ -0.37
FOXN3-219ENST00000615335 RECQLP46063 649 aaPredicted RBP12.73□□□□□ -0.37
FOXN3-219ENST00000615335 SRP54P61011 504 aaKnown RBP12.73□□□□□ -0.37
FOXN3-219ENST00000615335 SLC13A2Q13183 592 aa12.73□□□□□ -0.37
FOXN3-219ENST00000615335 TYSND1Q2T9J0 566 aa12.73□□□□□ -0.37
FOXN3-219ENST00000615335 HECTD2Q5U5R9 776 aa12.73□□□□□ -0.37
FOXN3-219ENST00000615335 NCEH1Q6PIU2 408 aa12.73□□□□□ -0.37
FOXN3-219ENST00000615335 SPRED1Q7Z699 444 aa12.73□□□□□ -0.37
FOXN3-219ENST00000615335 FBXL6Q8N531 539 aa12.73□□□□□ -0.37
FOXN3-219ENST00000615335 LINC00469Q8N7U9 141 aa12.73□□□□□ -0.37
FOXN3-219ENST00000615335 ZNF366Q8N895 744 aa12.73□□□□□ -0.37
FOXN3-219ENST00000615335 OR7A2PQ8NGA2 310 aa12.73□□□□□ -0.37
FOXN3-219ENST00000615335 MYO19Q96H55 970 aa12.73□□□□□ -0.37
FOXN3-219ENST00000615335 FBXL20Q96IG2 436 aa12.73□□□□□ -0.37
FOXN3-219ENST00000615335 KCNN2Q9H2S1 579 aa12.73□□□□□ -0.37
FOXN3-219ENST00000615335 ARNT2Q9HBZ2 717 aa12.73□□□□□ -0.37
FOXN3-219ENST00000615335 SPAG4Q9NPE6 437 aa12.73□□□□□ -0.37
FOXN3-219ENST00000615335 ZDHHC4Q9NPG8 344 aa12.73□□□□□ -0.37
FOXN3-219ENST00000615335 ADPRHL2Q9NX46 363 aa12.73□□□□□ -0.37
FOXN3-219ENST00000615335 SMPD3Q9NY59 655 aaPredicted RBP12.73□□□□□ -0.37
FOXN3-219ENST00000615335 VPS4AQ9UN37 437 aa12.73□□□□□ -0.37
FOXN3-219ENST00000615335 PDZK1P1A8MUH7 402 aa12.72□□□□□ -0.37
FOXN3-219ENST00000615335 MRASO14807 208 aa12.72□□□□□ -0.37
FOXN3-219ENST00000615335 TRIM16O95361 564 aa12.72□□□□□ -0.37
FOXN3-219ENST00000615335 DDOSTP39656 456 aa12.72□□□□□ -0.37
FOXN3-219ENST00000615335 AP1S1P61966 158 aa12.72□□□□□ -0.37
FOXN3-219ENST00000615335 SLC14A2Q15849 920 aa12.72□□□□□ -0.37
FOXN3-219ENST00000615335 CARD16Q5EG05 197 aa12.72□□□□□ -0.37
FOXN3-219ENST00000615335 CYP20A1Q6UW02 462 aa12.72□□□□□ -0.37
FOXN3-219ENST00000615335 TCAIMQ8N3R3 496 aa12.72□□□□□ -0.37
FOXN3-219ENST00000615335 PAF1Q8N7H5 531 aa12.72□□□□□ -0.37
FOXN3-219ENST00000615335 PSMA8Q8TAA3 256 aa12.72□□□□□ -0.37
FOXN3-219ENST00000615335 PIK3R3Q92569 461 aa12.72□□□□□ -0.37
FOXN3-219ENST00000615335 TADA1Q96BN2 335 aa12.72□□□□□ -0.37
FOXN3-219ENST00000615335 SLC45A3Q96JT2 553 aa12.72□□□□□ -0.37
FOXN3-219ENST00000615335 SLC25A23Q9BV35 468 aa12.72□□□□□ -0.37
FOXN3-219ENST00000615335 TRIM15Q9C019 465 aa12.72□□□□□ -0.37
FOXN3-219ENST00000615335 C8orf33Q9H7E9 229 aaPredicted RBP12.72□□□□□ -0.37
FOXN3-219ENST00000615335 LIN7BQ9HAP6 207 aa12.72□□□□□ -0.37
FOXN3-219ENST00000615335 VWA7Q9Y334 891 aa12.72□□□□□ -0.37
FOXN3-219ENST00000615335 SRP72O76094 671 aaKnown RBP12.72□□□□□ -0.37
FOXN3-219ENST00000615335 PRLP01236 227 aa12.72□□□□□ -0.37
FOXN3-219ENST00000615335 SRFP11831 508 aa12.72□□□□□ -0.37
FOXN3-219ENST00000615335 MAPK8P45983 427 aa12.72□□□□□ -0.37
FOXN3-219ENST00000615335 ZNF234Q14588 700 aa12.72□□□□□ -0.37
FOXN3-219ENST00000615335 PON2Q15165 354 aa12.72□□□□□ -0.37
FOXN3-219ENST00000615335 YIF1BQ5BJH7 314 aa12.72□□□□□ -0.37
FOXN3-219ENST00000615335 IER5LQ5T953 404 aa12.72□□□□□ -0.37
FOXN3-219ENST00000615335 SERPINA13PQ6UXR4 307 aa12.72□□□□□ -0.37
FOXN3-219ENST00000615335 DPY19L3Q6ZPD9 716 aa12.72□□□□□ -0.37
FOXN3-219ENST00000615335 PTAR1Q7Z6K3 402 aaPredicted RBP12.72□□□□□ -0.37
FOXN3-219ENST00000615335 ADHFE1Q8IWW8 467 aa12.72□□□□□ -0.37
FOXN3-219ENST00000615335 CADM2Q8N3J6 435 aa12.72□□□□□ -0.37
FOXN3-219ENST00000615335 OR2T34Q8NGX1 318 aa12.72□□□□□ -0.37
FOXN3-219ENST00000615335 OR2T3Q8NH03 318 aa12.72□□□□□ -0.37
FOXN3-219ENST00000615335 FRS2Q8WU20 508 aa12.72□□□□□ -0.37
FOXN3-219ENST00000615335 ANKRD49Q8WVL7 239 aa12.72□□□□□ -0.37
FOXN3-219ENST00000615335 UBXN10Q96LJ8 280 aa12.72□□□□□ -0.37
FOXN3-219ENST00000615335 ASB2Q96Q27 587 aa12.72□□□□□ -0.37
FOXN3-219ENST00000615335 TRMOQ9BU70 441 aa12.72□□□□□ -0.37
FOXN3-219ENST00000615335 MTG2Q9H4K7 406 aa12.72□□□□□ -0.37
FOXN3-219ENST00000615335 GSTO2Q9H4Y5 243 aa12.72□□□□□ -0.37
FOXN3-219ENST00000615335 CCM2LQ9NUG4 571 aaPredicted RBP12.72□□□□□ -0.37
FOXN3-219ENST00000615335 RAI2Q9Y5P3 530 aa12.72□□□□□ -0.37
FOXN3-219ENST00000615335 PRORSD1PA6NEY8 169 aa12.71□□□□□ -0.37
FOXN3-219ENST00000615335 ANTXRLA6NF34 631 aa12.71□□□□□ -0.37
FOXN3-219ENST00000615335 NRP2O60462 931 aa12.71□□□□□ -0.37
FOXN3-219ENST00000615335 FCGR1AP12314 374 aa12.71□□□□□ -0.37
FOXN3-219ENST00000615335 HLA-EP13747 358 aa12.71□□□□□ -0.37
FOXN3-219ENST00000615335 CSNK1DP48730 415 aa12.71□□□□□ -0.37
FOXN3-219ENST00000615335 BNC1Q01954 994 aa12.71□□□□□ -0.37
FOXN3-219ENST00000615335 BCL2L1Q07817 233 aa12.71□□□□□ -0.37
FOXN3-219ENST00000615335 CTF1Q16619 201 aa12.71□□□□□ -0.37
FOXN3-219ENST00000615335 SAMD4BQ5PRF9 694 aaKnown RBP12.71□□□□□ -0.37
FOXN3-219ENST00000615335 DESI1Q6ICB0 168 aa12.71□□□□□ -0.37
FOXN3-219ENST00000615335 FAM45BPQ6NSW5 357 aa12.71□□□□□ -0.37
FOXN3-219ENST00000615335 LAYNQ6UX15 382 aa12.71□□□□□ -0.37
FOXN3-219ENST00000615335 DHFR2Q86XF0 187 aa12.71□□□□□ -0.37
FOXN3-219ENST00000615335 EPHX4Q8IUS5 362 aa12.71□□□□□ -0.37
FOXN3-219ENST00000615335 OFCC1Q8IZS5 231 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms