RNA–Protein interactions for RNA: ENST00000613508.4

CBWD1-222, Transcript of COBW domain containing 1, human

TSL 5 BASIC

Gene CBWD1, Length 1,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CBWD1-222	ENST00000613508	KCNMB4	Q86W47	210 aa		10.63	□□□□□ -0.71
CBWD1-222	ENST00000613508	MVB12A	Q96EY5	273 aa		10.63	□□□□□ -0.71
CBWD1-222	ENST00000613508	C5orf34	Q96MH7	638 aa		10.63	□□□□□ -0.71
CBWD1-222	ENST00000613508	LMF1	Q96S06	567 aa		10.63	□□□□□ -0.71
CBWD1-222	ENST00000613508	ZNF304	Q9HCX3	659 aa		10.63	□□□□□ -0.71
CBWD1-222	ENST00000613508	BFAR	Q9NZS9	450 aa		10.63	□□□□□ -0.71
CBWD1-222	ENST00000613508	ZNF282	Q9UDV7	671 aa	Predicted RBP	10.63	□□□□□ -0.71
CBWD1-222	ENST00000613508	CSAG2	Q9Y5P2	127 aa		10.63	□□□□□ -0.71
CBWD1-222	ENST00000613508	LOC105369274	A0A096LPK9	316 aa		10.62	□□□□□ -0.71
CBWD1-222	ENST00000613508	LOC102723532	A0A0G2JNH3	316 aa		10.62	□□□□□ -0.71
CBWD1-222	ENST00000613508		A1L4Q6	167 aa		10.62	□□□□□ -0.71
CBWD1-222	ENST00000613508	MYO1C	O00159	1063 aa		10.62	□□□□□ -0.71
CBWD1-222	ENST00000613508	PCDH17	O14917	1159 aa		10.62	□□□□□ -0.71
CBWD1-222	ENST00000613508	PFDN6	O15212	129 aa		10.62	□□□□□ -0.71
CBWD1-222	ENST00000613508	PSIP1	O75475	530 aa	Known RBP	10.62	□□□□□ -0.71
CBWD1-222	ENST00000613508	VAPB	O95292	243 aa		10.62	□□□□□ -0.71
CBWD1-222	ENST00000613508	HP	P00738	406 aa		10.62	□□□□□ -0.71
CBWD1-222	ENST00000613508	ZGLP1	P0C6A0	271 aa		10.62	□□□□□ -0.71
CBWD1-222	ENST00000613508	TPSB2	P20231	275 aa		10.62	□□□□□ -0.71
CBWD1-222	ENST00000613508	PSMB5	P28074	263 aa		10.62	□□□□□ -0.71
CBWD1-222	ENST00000613508	HSD17B2	P37059	387 aa		10.62	□□□□□ -0.71
CBWD1-222	ENST00000613508	OR1D4	P47884	311 aa		10.62	□□□□□ -0.71
CBWD1-222	ENST00000613508	EIF3B	P55884	814 aa	Known RBP	10.62	□□□□□ -0.71
CBWD1-222	ENST00000613508	OCA2	Q04671	838 aa		10.62	□□□□□ -0.71
CBWD1-222	ENST00000613508	KLC1	Q07866	573 aa		10.62	□□□□□ -0.71
CBWD1-222	ENST00000613508	MFAP5	Q13361	173 aa		10.62	□□□□□ -0.71
CBWD1-222	ENST00000613508	DSG2	Q14126	1118 aa		10.62	□□□□□ -0.71
CBWD1-222	ENST00000613508	ELOA	Q14241	798 aa	Known RBP	10.62	□□□□□ -0.71
CBWD1-222	ENST00000613508	ZNF169	Q14929	603 aa	Predicted RBP	10.62	□□□□□ -0.71
CBWD1-222	ENST00000613508	TLR1	Q15399	786 aa		10.62	□□□□□ -0.71
CBWD1-222	ENST00000613508	TPSAB1	Q15661	275 aa		10.62	□□□□□ -0.71
CBWD1-222	ENST00000613508	RBBP7	Q16576	425 aa		10.62	□□□□□ -0.71
CBWD1-222	ENST00000613508	HIF1A	Q16665	826 aa		10.62	□□□□□ -0.71
CBWD1-222	ENST00000613508	MUM1	Q2TAK8	710 aa		10.62	□□□□□ -0.71
CBWD1-222	ENST00000613508	RPUSD3	Q6P087	351 aa	Known RBP	10.62	□□□□□ -0.71
CBWD1-222	ENST00000613508	FBXO42	Q6P3S6	717 aa		10.62	□□□□□ -0.71
CBWD1-222	ENST00000613508	LRRC8B	Q6P9F7	803 aa		10.62	□□□□□ -0.71
CBWD1-222	ENST00000613508	ISLR2	Q6UXK2	745 aa		10.62	□□□□□ -0.71
CBWD1-222	ENST00000613508	GAS2L3	Q86XJ1	694 aa		10.62	□□□□□ -0.71
CBWD1-222	ENST00000613508	OR4N4	Q8N0Y3	316 aa		10.62	□□□□□ -0.71
CBWD1-222	ENST00000613508	OR9A1P	Q8NGU1	263 aa		10.62	□□□□□ -0.71
CBWD1-222	ENST00000613508	STT3B	Q8TCJ2	826 aa		10.62	□□□□□ -0.71
CBWD1-222	ENST00000613508	SKA2	Q8WVK7	121 aa	Predicted RBP	10.62	□□□□□ -0.71
CBWD1-222	ENST00000613508	MAIP1	Q8WWC4	291 aa		10.62	□□□□□ -0.71
CBWD1-222	ENST00000613508	C10orf90	Q96M02	699 aa		10.62	□□□□□ -0.71
CBWD1-222	ENST00000613508	MIPEP	Q99797	713 aa		10.62	□□□□□ -0.71
CBWD1-222	ENST00000613508	ZFYVE21	Q9BQ24	234 aa		10.62	□□□□□ -0.71
CBWD1-222	ENST00000613508	TRIM56	Q9BRZ2	755 aa	Known RBP	10.62	□□□□□ -0.71
CBWD1-222	ENST00000613508	DPH7	Q9BTV6	452 aa		10.62	□□□□□ -0.71
CBWD1-222	ENST00000613508	CRB3	Q9BUF7	120 aa		10.62	□□□□□ -0.71
CBWD1-222	ENST00000613508	SOX17	Q9H6I2	414 aa	Predicted RBP	10.62	□□□□□ -0.71
CBWD1-222	ENST00000613508	KLHL42	Q9P2K6	505 aa		10.62	□□□□□ -0.71
CBWD1-222	ENST00000613508	GUCA1B	Q9UMX6	200 aa		10.62	□□□□□ -0.71
CBWD1-222	ENST00000613508	SOX13	Q9UN79	622 aa		10.62	□□□□□ -0.71
CBWD1-222	ENST00000613508	RUVBL2	Q9Y230	463 aa	Known RBP	10.62	□□□□□ -0.71
CBWD1-222	ENST00000613508	DOCK10	Q96BY6	2186 aa		10.62	□□□□□ -0.71
CBWD1-222	ENST00000613508	IGKV1-8	A0A0C4DH67	115 aa		10.61	□□□□□ -0.71
CBWD1-222	ENST00000613508	KRT87P	A6NCN2	255 aa		10.61	□□□□□ -0.71
CBWD1-222	ENST00000613508	E2F3	O00716	465 aa		10.61	□□□□□ -0.71
CBWD1-222	ENST00000613508	NRP2	O60462	931 aa		10.61	□□□□□ -0.71
CBWD1-222	ENST00000613508	NIPSNAP2	O75323	286 aa		10.61	□□□□□ -0.71
CBWD1-222	ENST00000613508	ALOX12B	O75342	701 aa		10.61	□□□□□ -0.71
CBWD1-222	ENST00000613508	EDN3	P14138	238 aa		10.61	□□□□□ -0.71
CBWD1-222	ENST00000613508	ACPP	P15309	386 aa		10.61	□□□□□ -0.71
CBWD1-222	ENST00000613508	OGN	P20774	298 aa	Known RBP	10.61	□□□□□ -0.71
CBWD1-222	ENST00000613508	FDXR	P22570	491 aa		10.61	□□□□□ -0.71
CBWD1-222	ENST00000613508	MGAT1	P26572	445 aa		10.61	□□□□□ -0.71
CBWD1-222	ENST00000613508	CMPK1	P30085	196 aa		10.61	□□□□□ -0.71
CBWD1-222	ENST00000613508	DCT	P40126	519 aa		10.61	□□□□□ -0.71
CBWD1-222	ENST00000613508	BDKRB1	P46663	353 aa		10.61	□□□□□ -0.71
CBWD1-222	ENST00000613508	GLRB	P48167	497 aa		10.61	□□□□□ -0.71
CBWD1-222	ENST00000613508	BASP1	P80723	227 aa	Known RBP	10.61	□□□□□ -0.71
CBWD1-222	ENST00000613508	ANKRD20A4	Q4UJ75	823 aa		10.61	□□□□□ -0.71
CBWD1-222	ENST00000613508	EEF1AKMT2	Q5JPI9	291 aa	Known RBP	10.61	□□□□□ -0.71
CBWD1-222	ENST00000613508	KIAA0930	Q6ICG6	404 aa	Predicted RBP	10.61	□□□□□ -0.71
CBWD1-222	ENST00000613508	ZNF425	Q6IV72	752 aa		10.61	□□□□□ -0.71
CBWD1-222	ENST00000613508	CNST	Q6PJW8	725 aa		10.61	□□□□□ -0.71
CBWD1-222	ENST00000613508	SHISA6	Q6ZSJ9	500 aa		10.61	□□□□□ -0.71
CBWD1-222	ENST00000613508	NEK10	Q6ZWH5	1172 aa		10.61	□□□□□ -0.71
CBWD1-222	ENST00000613508	CILP2	Q8IUL8	1156 aa		10.61	□□□□□ -0.71
CBWD1-222	ENST00000613508	PARP9	Q8IXQ6	854 aa		10.61	□□□□□ -0.71
CBWD1-222	ENST00000613508	ARHGEF39	Q8N4T4	335 aa		10.61	□□□□□ -0.71
CBWD1-222	ENST00000613508	DTWD1	Q8N5C7	304 aa		10.61	□□□□□ -0.71
CBWD1-222	ENST00000613508	FBXO15	Q8NCQ5	510 aa	Predicted RBP	10.61	□□□□□ -0.71
CBWD1-222	ENST00000613508	DNAJB14	Q8TBM8	379 aa		10.61	□□□□□ -0.71
CBWD1-222	ENST00000613508	GRHL3	Q8TE85	626 aa		10.61	□□□□□ -0.71
CBWD1-222	ENST00000613508	FAR1	Q8WVX9	515 aa		10.61	□□□□□ -0.71
CBWD1-222	ENST00000613508	SMPDL3A	Q92484	453 aa		10.61	□□□□□ -0.71
CBWD1-222	ENST00000613508	MIEF2	Q96C03	454 aa		10.61	□□□□□ -0.71
CBWD1-222	ENST00000613508	MFSD3	Q96ES6	412 aa		10.61	□□□□□ -0.71
CBWD1-222	ENST00000613508	THOC3	Q96J01	351 aa	Known RBP	10.61	□□□□□ -0.71
CBWD1-222	ENST00000613508	SLX1A	Q9BQ83	275 aa		10.61	□□□□□ -0.71
CBWD1-222	ENST00000613508	PLCD4	Q9BRC7	762 aa		10.61	□□□□□ -0.71
CBWD1-222	ENST00000613508	TGIF2	Q9GZN2	237 aa		10.61	□□□□□ -0.71
CBWD1-222	ENST00000613508	EPS8L2	Q9H6S3	715 aa		10.61	□□□□□ -0.71
CBWD1-222	ENST00000613508	FAM114A2	Q9NRY5	505 aa		10.61	□□□□□ -0.71
CBWD1-222	ENST00000613508	HOMER3	Q9NSC5	361 aa		10.61	□□□□□ -0.71
CBWD1-222	ENST00000613508	INTS10	Q9NVR2	710 aa	Known RBP	10.61	□□□□□ -0.71
CBWD1-222	ENST00000613508	SYBU	Q9NX95	663 aa		10.61	□□□□□ -0.71
CBWD1-222	ENST00000613508	ZC3H7B	Q9UGR2	993 aa	Known RBP	10.61	□□□□□ -0.71

Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms