RNA–Protein interactions for RNA: ENST00000612856.4

FAM3A-221, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 3,995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-221ENST00000612856 CCDC126Q96EE4 140 aa10.58□□□□□ -0.72
FAM3A-221ENST00000612856 SHDQ96IW2 340 aa10.58□□□□□ -0.72
FAM3A-221ENST00000612856 SPTBP11277 2137 aa10.57□□□□□ -0.72
FAM3A-221ENST00000612856 EDDM13A0A1B0GTR0 161 aa10.57□□□□□ -0.72
FAM3A-221ENST00000612856 ANKRD34BA5PLL1 514 aa10.57□□□□□ -0.72
FAM3A-221ENST00000612856 TRPC5OSA6NMA1 111 aa10.57□□□□□ -0.72
FAM3A-221ENST00000612856 RPN2P04844 631 aa10.57□□□□□ -0.72
FAM3A-221ENST00000612856 MTHFD1P11586 935 aaKnown RBP10.57□□□□□ -0.72
FAM3A-221ENST00000612856 CDH1P12830 882 aa10.57□□□□□ -0.72
FAM3A-221ENST00000612856 SRCP12931 536 aa10.57□□□□□ -0.72
FAM3A-221ENST00000612856 IL7RP16871 459 aa10.57□□□□□ -0.72
FAM3A-221ENST00000612856 CNTFP26441 200 aa10.57□□□□□ -0.72
FAM3A-221ENST00000612856 NTSR1P30989 418 aa10.57□□□□□ -0.72
FAM3A-221ENST00000612856 RAB15P59190 212 aa10.57□□□□□ -0.72
FAM3A-221ENST00000612856 LRP8Q14114 963 aa10.57□□□□□ -0.72
FAM3A-221ENST00000612856 CCSAPQ6IQ19 270 aaPredicted RBP10.57□□□□□ -0.72
FAM3A-221ENST00000612856 BORAQ6PGQ7 559 aa10.57□□□□□ -0.72
FAM3A-221ENST00000612856 TSSK4Q6SA08 328 aa10.57□□□□□ -0.72
FAM3A-221ENST00000612856 ZNF852Q6ZMS4 543 aa10.57□□□□□ -0.72
FAM3A-221ENST00000612856 UBASH3BQ8TF42 649 aa10.57□□□□□ -0.72
FAM3A-221ENST00000612856 PSKH2Q96QS6 385 aa10.57□□□□□ -0.72
FAM3A-221ENST00000612856 BOCQ9BWV1 1114 aa10.57□□□□□ -0.72
FAM3A-221ENST00000612856 NEK6Q9HC98 313 aa10.57□□□□□ -0.72
FAM3A-221ENST00000612856 A8MUA0 341 aa10.57□□□□□ -0.72
FAM3A-221ENST00000612856 ARHGEF9O43307 516 aa10.57□□□□□ -0.72
FAM3A-221ENST00000612856 AP1G1O43747 822 aa10.57□□□□□ -0.72
FAM3A-221ENST00000612856 STK16O75716 305 aa10.57□□□□□ -0.72
FAM3A-221ENST00000612856 OR4F21O95013 312 aa10.57□□□□□ -0.72
FAM3A-221ENST00000612856 BMP10O95393 424 aa10.57□□□□□ -0.72
FAM3A-221ENST00000612856 HOXB8P17481 243 aaPredicted RBP10.57□□□□□ -0.72
FAM3A-221ENST00000612856 TPSB2P20231 275 aa10.57□□□□□ -0.72
FAM3A-221ENST00000612856 BDKRB1P46663 353 aa10.57□□□□□ -0.72
FAM3A-221ENST00000612856 TUBA4AP68366 448 aa10.57□□□□□ -0.72
FAM3A-221ENST00000612856 HMGCS1Q01581 520 aa10.57□□□□□ -0.72
FAM3A-221ENST00000612856 CHIT1Q13231 466 aa10.57□□□□□ -0.72
FAM3A-221ENST00000612856 APOFQ13790 326 aa10.57□□□□□ -0.72
FAM3A-221ENST00000612856 TPSAB1Q15661 275 aa10.57□□□□□ -0.72
FAM3A-221ENST00000612856 TCTN1Q2MV58 587 aa10.57□□□□□ -0.72
FAM3A-221ENST00000612856 USP39Q53GS9 565 aaKnown RBP10.57□□□□□ -0.72
FAM3A-221ENST00000612856 CYP20A1Q6UW02 462 aa10.57□□□□□ -0.72
FAM3A-221ENST00000612856 EEF1AKMT1Q8WVE0 214 aa10.57□□□□□ -0.72
FAM3A-221ENST00000612856 ROGDIQ9GZN7 287 aa10.57□□□□□ -0.72
FAM3A-221ENST00000612856 IL21RQ9HBE5 538 aa10.57□□□□□ -0.72
FAM3A-221ENST00000612856 AKAP7Q9P0M2 348 aaPredicted RBP10.57□□□□□ -0.72
FAM3A-221ENST00000612856 KIF17Q9P2E2 1029 aa10.57□□□□□ -0.72
FAM3A-221ENST00000612856 GIMAP2Q9UG22 337 aa10.57□□□□□ -0.72
FAM3A-221ENST00000612856 FBXW2Q9UKT8 454 aa10.57□□□□□ -0.72
FAM3A-221ENST00000612856 CACNA1AO00555 2505 aa10.57□□□□□ -0.72
FAM3A-221ENST00000612856 ROS1P08922 2347 aa10.57□□□□□ -0.72
FAM3A-221ENST00000612856 ZNF860A6NHJ4 632 aa10.57□□□□□ -0.72
FAM3A-221ENST00000612856 TMEM114B3SHH9 223 aa10.57□□□□□ -0.72
FAM3A-221ENST00000612856 ANXA6P08133 673 aa10.57□□□□□ -0.72
FAM3A-221ENST00000612856 GSTM1P09488 218 aa10.57□□□□□ -0.72
FAM3A-221ENST00000612856 ALOX5P09917 674 aa10.57□□□□□ -0.72
FAM3A-221ENST00000612856 COX7A2P14406 83 aa10.57□□□□□ -0.72
FAM3A-221ENST00000612856 RPL26P61254 145 aaKnown RBP10.57□□□□□ -0.72
FAM3A-221ENST00000612856 ALDH6A1Q02252 535 aaKnown RBP10.57□□□□□ -0.72
FAM3A-221ENST00000612856 CNTN1Q12860 1018 aa10.57□□□□□ -0.72
FAM3A-221ENST00000612856 PPP1R3AQ16821 1122 aa10.57□□□□□ -0.72
FAM3A-221ENST00000612856 MLIPQ5VWP3 458 aa10.57□□□□□ -0.72
FAM3A-221ENST00000612856 ERN2Q76MJ5 926 aaKnown RBP10.57□□□□□ -0.72
FAM3A-221ENST00000612856 SLC22A9Q8IVM8 553 aa10.57□□□□□ -0.72
FAM3A-221ENST00000612856 CHERPQ8IWX8 916 aaKnown RBP10.57□□□□□ -0.72
FAM3A-221ENST00000612856 FAM20CQ8IXL6 584 aa10.57□□□□□ -0.72
FAM3A-221ENST00000612856 ABHD11Q8NFV4 315 aa10.57□□□□□ -0.72
FAM3A-221ENST00000612856 MZB1Q8WU39 189 aa10.57□□□□□ -0.72
FAM3A-221ENST00000612856 TRUB1Q8WWH5 349 aaKnown RBP10.57□□□□□ -0.72
FAM3A-221ENST00000612856 SIGLEC10Q96LC7 697 aa10.57□□□□□ -0.72
FAM3A-221ENST00000612856 SRMSQ9H3Y6 488 aa10.57□□□□□ -0.72
FAM3A-221ENST00000612856 GALPQ9UBC7 116 aa10.57□□□□□ -0.72
FAM3A-221ENST00000612856 FETUBQ9UGM5 382 aa10.57□□□□□ -0.72
FAM3A-221ENST00000612856 U3KQV3 271 aa10.57□□□□□ -0.72
FAM3A-221ENST00000612856 AKAP6Q13023 2319 aa10.56□□□□□ -0.72
FAM3A-221ENST00000612856 I6L893 689 aaPredicted RBP10.56□□□□□ -0.72
FAM3A-221ENST00000612856 DCLK1O15075 740 aa10.56□□□□□ -0.72
FAM3A-221ENST00000612856 MUSKO15146 869 aa10.56□□□□□ -0.72
FAM3A-221ENST00000612856 SNNO75324 88 aaPredicted RBP10.56□□□□□ -0.72
FAM3A-221ENST00000612856 SNAP29O95721 258 aa10.56□□□□□ -0.72
FAM3A-221ENST00000612856 CYP17A1P05093 508 aa10.56□□□□□ -0.72
FAM3A-221ENST00000612856 CES1P23141 567 aa10.56□□□□□ -0.72
FAM3A-221ENST00000612856 ELAVL3Q14576 367 aaKnown RBP10.56□□□□□ -0.72
FAM3A-221ENST00000612856 ZFP69Q49AA0 526 aa10.56□□□□□ -0.72
FAM3A-221ENST00000612856 ATAD3BQ5T9A4 648 aa10.56□□□□□ -0.72
FAM3A-221ENST00000612856 PM20D1Q6GTS8 502 aa10.56□□□□□ -0.72
FAM3A-221ENST00000612856 PSAPL1Q6NUJ1 521 aa10.56□□□□□ -0.72
FAM3A-221ENST00000612856 UBE2J2Q8N2K1 259 aa10.56□□□□□ -0.72
FAM3A-221ENST00000612856 WFIKKN2Q8TEU8 576 aa10.56□□□□□ -0.72
FAM3A-221ENST00000612856 CHPT1Q8WUD6 406 aa10.56□□□□□ -0.72
FAM3A-221ENST00000612856 ITPKCQ96DU7 683 aa10.56□□□□□ -0.72
FAM3A-221ENST00000612856 TPD52L3Q96J77 140 aa10.56□□□□□ -0.72
FAM3A-221ENST00000612856 MCMBPQ9BTE3 642 aa10.56□□□□□ -0.72
FAM3A-221ENST00000612856 WDR12Q9GZL7 423 aaKnown RBP10.56□□□□□ -0.72
FAM3A-221ENST00000612856 OR10H2O60403 315 aa10.56□□□□□ -0.72
FAM3A-221ENST00000612856 ALDOAP04075 364 aaKnown RBP10.56□□□□□ -0.72
FAM3A-221ENST00000612856 HSMCR30P0CW71 290 aa10.56□□□□□ -0.72
FAM3A-221ENST00000612856 GNSP15586 552 aa10.56□□□□□ -0.72
FAM3A-221ENST00000612856 IL12AP29459 219 aa10.56□□□□□ -0.72
FAM3A-221ENST00000612856 RHDQ02161 417 aa10.56□□□□□ -0.72
FAM3A-221ENST00000612856 PAFAH1B3Q15102 231 aaKnown RBP10.56□□□□□ -0.72
FAM3A-221ENST00000612856 CST6Q15828 149 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms