RNA–Protein interactions for RNA: ENST00000612045.4

CBWD1-220, Transcript of COBW domain containing 1, humanhuman

TSL 1 (best)

Gene CBWD1, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-220ENST00000612045 ZNF33BQ06732 778 aa11.89□□□□□ -0.51
CBWD1-220ENST00000612045 GRIK2Q13002 908 aa11.89□□□□□ -0.51
CBWD1-220ENST00000612045 EIF2B5Q13144 721 aaKnown RBP11.89□□□□□ -0.51
CBWD1-220ENST00000612045 SMU1Q2TAY7 513 aa11.89□□□□□ -0.51
CBWD1-220ENST00000612045 CATSPEREQ5SY80 951 aa11.89□□□□□ -0.51
CBWD1-220ENST00000612045 NRROSQ86YC3 692 aa11.89□□□□□ -0.51
CBWD1-220ENST00000612045 FUNDC1Q8IVP5 155 aa11.89□□□□□ -0.51
CBWD1-220ENST00000612045 WDR20Q8TBZ3 569 aa11.89□□□□□ -0.51
CBWD1-220ENST00000612045 SMPDL3AQ92484 453 aa11.89□□□□□ -0.51
CBWD1-220ENST00000612045 RCN3Q96D15 328 aa11.89□□□□□ -0.51
CBWD1-220ENST00000612045 WDR34Q96EX3 536 aa11.89□□□□□ -0.51
CBWD1-220ENST00000612045 KLHDC7BQ96G42 594 aa11.89□□□□□ -0.51
CBWD1-220ENST00000612045 HAUS8Q9BT25 410 aa11.89□□□□□ -0.51
CBWD1-220ENST00000612045 EHD1Q9H4M9 534 aa11.89□□□□□ -0.51
CBWD1-220ENST00000612045 LRTM1Q9HBL6 345 aa11.89□□□□□ -0.51
CBWD1-220ENST00000612045 SLC40A1Q9NP59 571 aa11.89□□□□□ -0.51
CBWD1-220ENST00000612045 PRAMEF33A0A0G2JMD5 474 aa11.88□□□□□ -0.51
CBWD1-220ENST00000612045 AIM2O14862 343 aa11.88□□□□□ -0.51
CBWD1-220ENST00000612045 AXIN1O15169 862 aa11.88□□□□□ -0.51
CBWD1-220ENST00000612045 SNRPB2P08579 225 aaKnown RBP11.88□□□□□ -0.51
CBWD1-220ENST00000612045 C1GALT1C1LP0DN25 315 aa11.88□□□□□ -0.51
CBWD1-220ENST00000612045 SLC2A4P14672 509 aa11.88□□□□□ -0.51
CBWD1-220ENST00000612045 ITGAXP20702 1163 aa11.88□□□□□ -0.51
CBWD1-220ENST00000612045 MAGEA9P43362 315 aa11.88□□□□□ -0.51
CBWD1-220ENST00000612045 RPL38P63173 70 aaKnown RBP11.88□□□□□ -0.51
CBWD1-220ENST00000612045 ZXDAP98168 799 aa11.88□□□□□ -0.51
CBWD1-220ENST00000612045 ILF3Q12906 894 aaKnown RBP eCLIP11.88□□□□□ -0.51
CBWD1-220ENST00000612045 MAD2L1Q13257 205 aaPredicted RBP11.88□□□□□ -0.51
CBWD1-220ENST00000612045 FZD2Q14332 565 aa11.88□□□□□ -0.51
CBWD1-220ENST00000612045 PDCD4Q53EL6 469 aaKnown RBP11.88□□□□□ -0.51
CBWD1-220ENST00000612045 IL23RQ5VWK5 629 aa11.88□□□□□ -0.51
CBWD1-220ENST00000612045 NXPE4Q6UWF7 544 aa11.88□□□□□ -0.51
CBWD1-220ENST00000612045 LINC01555Q8NAE3 123 aa11.88□□□□□ -0.51
CBWD1-220ENST00000612045 OR52E1Q8NGJ3 308 aa11.88□□□□□ -0.51
CBWD1-220ENST00000612045 MCUR1Q96AQ8 359 aa11.88□□□□□ -0.51
CBWD1-220ENST00000612045 SH3KBP1Q96B97 665 aa11.88□□□□□ -0.51
CBWD1-220ENST00000612045 SPACA7Q96KW9 195 aa11.88□□□□□ -0.51
CBWD1-220ENST00000612045 IER2Q9BTL4 223 aa11.88□□□□□ -0.51
CBWD1-220ENST00000612045 EFCAB11Q9BUY7 163 aa11.88□□□□□ -0.51
CBWD1-220ENST00000612045 ACAT2Q9BWD1 397 aa11.88□□□□□ -0.51
CBWD1-220ENST00000612045 TCEAL2Q9H3H9 227 aaPredicted RBP11.88□□□□□ -0.51
CBWD1-220ENST00000612045 CAAP1Q9H8G2 361 aa11.88□□□□□ -0.51
CBWD1-220ENST00000612045 C1orf109Q9NX04 203 aa11.88□□□□□ -0.51
CBWD1-220ENST00000612045 NOP53Q9NZM5 478 aaKnown RBP11.88□□□□□ -0.51
CBWD1-220ENST00000612045 KLF15Q9UIH9 416 aa11.88□□□□□ -0.51
CBWD1-220ENST00000612045 PCDHGA11Q9Y5H2 935 aa11.88□□□□□ -0.51
CBWD1-220ENST00000612045 COLEC10Q9Y6Z7 277 aa11.88□□□□□ -0.51
CBWD1-220ENST00000612045 PCM1Q15154 2024 aa11.88□□□□□ -0.51
CBWD1-220ENST00000612045 A0A1W2PPV9 198 aa11.88□□□□□ -0.51
CBWD1-220ENST00000612045 A6NCN8 305 aa11.88□□□□□ -0.51
CBWD1-220ENST00000612045 NPIPB8E9PQR5 432 aa11.88□□□□□ -0.51
CBWD1-220ENST00000612045 SEC22BO75396 215 aa11.88□□□□□ -0.51
CBWD1-220ENST00000612045 RSL1D1O76021 490 aaKnown RBP11.88□□□□□ -0.51
CBWD1-220ENST00000612045 PRPH2P23942 346 aa11.88□□□□□ -0.51
CBWD1-220ENST00000612045 PKLRP30613 574 aa11.88□□□□□ -0.51
CBWD1-220ENST00000612045 PGM1P36871 562 aa11.88□□□□□ -0.51
CBWD1-220ENST00000612045 NUDT2P50583 147 aa11.88□□□□□ -0.51
CBWD1-220ENST00000612045 ELF3P78545 371 aaPredicted RBP11.88□□□□□ -0.51
CBWD1-220ENST00000612045 CSTF3Q12996 717 aaKnown RBP11.88□□□□□ -0.51
CBWD1-220ENST00000612045 STX5Q13190 355 aa11.88□□□□□ -0.51
CBWD1-220ENST00000612045 USP39Q53GS9 565 aaKnown RBP11.88□□□□□ -0.51
CBWD1-220ENST00000612045 ZNF542PQ5EBM4 170 aa11.88□□□□□ -0.51
CBWD1-220ENST00000612045 PAGE2BQ5JRK9 111 aa11.88□□□□□ -0.51
CBWD1-220ENST00000612045 MED27Q6P2C8 311 aa11.88□□□□□ -0.51
CBWD1-220ENST00000612045 LPCAT2Q7L5N7 544 aa11.88□□□□□ -0.51
CBWD1-220ENST00000612045 ZFAND4Q86XD8 727 aa11.88□□□□□ -0.51
CBWD1-220ENST00000612045 RNF175Q8N4F7 328 aa11.88□□□□□ -0.51
CBWD1-220ENST00000612045 KYQ8NBH2 561 aa11.88□□□□□ -0.51
CBWD1-220ENST00000612045 OR7G3Q8NG95 312 aa11.88□□□□□ -0.51
CBWD1-220ENST00000612045 GPBAR1Q8TDU6 330 aa11.88□□□□□ -0.51
CBWD1-220ENST00000612045 MTERF1Q99551 399 aaKnown RBP11.88□□□□□ -0.51
CBWD1-220ENST00000612045 SLC25A23Q9BV35 468 aa11.88□□□□□ -0.51
CBWD1-220ENST00000612045 RAB11FIP5Q9BXF6 653 aa11.88□□□□□ -0.51
CBWD1-220ENST00000612045 PCBD2Q9H0N5 130 aa11.88□□□□□ -0.51
CBWD1-220ENST00000612045 XKR8Q9H6D3 395 aa11.88□□□□□ -0.51
CBWD1-220ENST00000612045 KIR3DX1Q9H7L2 352 aa11.88□□□□□ -0.51
CBWD1-220ENST00000612045 EFCAB1Q9HAE3 211 aa11.88□□□□□ -0.51
CBWD1-220ENST00000612045 GEMIN8Q9NWZ8 242 aaKnown RBP11.88□□□□□ -0.51
CBWD1-220ENST00000612045 ZIM2Q9NZV7 527 aa11.88□□□□□ -0.51
CBWD1-220ENST00000612045 TAC3Q9UHF0 121 aa11.88□□□□□ -0.51
CBWD1-220ENST00000612045 EIF3LQ9Y262 564 aaKnown RBP11.88□□□□□ -0.51
CBWD1-220ENST00000612045 POLR3HQ9Y535 204 aaPredicted RBP11.88□□□□□ -0.51
CBWD1-220ENST00000612045 KNL1Q8NG31 2342 aa11.87□□□□□ -0.51
CBWD1-220ENST00000612045 SLC22A3O75751 556 aa11.87□□□□□ -0.51
CBWD1-220ENST00000612045 RASSF9O75901 435 aa11.87□□□□□ -0.51
CBWD1-220ENST00000612045 G6PDP11413 515 aa11.87□□□□□ -0.51
CBWD1-220ENST00000612045 CDH1P12830 882 aa11.87□□□□□ -0.51
CBWD1-220ENST00000612045 F3P13726 295 aa11.87□□□□□ -0.51
CBWD1-220ENST00000612045 NDUFS1P28331 727 aa11.87□□□□□ -0.51
CBWD1-220ENST00000612045 UFM1P61960 85 aa11.87□□□□□ -0.51
CBWD1-220ENST00000612045 YBX1P67809 324 aaKnown RBP11.87□□□□□ -0.51
CBWD1-220ENST00000612045 LAPTM5Q13571 262 aa11.87□□□□□ -0.51
CBWD1-220ENST00000612045 DDX39BQ13838 428 aaKnown RBP11.87□□□□□ -0.51
CBWD1-220ENST00000612045 SLBPQ14493 270 aaKnown RBP eCLIP11.87□□□□□ -0.51
CBWD1-220ENST00000612045 KIAA0040Q15053 153 aa11.87□□□□□ -0.51
CBWD1-220ENST00000612045 CYP20A1Q6UW02 462 aa11.87□□□□□ -0.51
CBWD1-220ENST00000612045 SLC36A4Q6YBV0 504 aa11.87□□□□□ -0.51
CBWD1-220ENST00000612045 MAMSTRQ6ZN01 415 aa11.87□□□□□ -0.51
CBWD1-220ENST00000612045 PARGQ86W56 976 aa11.87□□□□□ -0.51
CBWD1-220ENST00000612045 C17orf64Q86WR6 236 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms